ZMP

pabpc1b

Ensembl ID:

ENSDARG00000021140

ZFIN ID:

ZDB-GENE-050308-1

Description:

poly A binding protein, cytoplasmic 1 b [Source:RefSeq peptide;Acc:NP_957176]

Human Orthologues:

PABPC1, PABPC3

Human Descriptions:

poly(A) binding protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:8554]
poly(A) binding protein, cytoplasmic 3 [Source:HGNC Symbol;Acc:8556]

Mouse Orthologues:

Pabpc1, Pabpc2, Pabpc6

Mouse Descriptions:

poly(A) binding protein, cytoplasmic 1 Gene [Source:MGI Symbol;Acc:MGI:1349722]
poly(A) binding protein, cytoplasmic 2 Gene [Source:MGI Symbol;Acc:MGI:1349723]
poly(A) binding protein, cytoplasmic 6 Gene [Source:MGI Symbol;Acc:MGI:1914793]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa818	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa818

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000032474	Nonsense	282	634	6	15
ENSDART00000143087	Nonsense	165	207	3	4

The following transcripts of ENSDARG00000021140 do not overlap with this mutation:

ENSDART00000136324

Genomic Location (Zv9):

Chromosome 19 (position 12756711)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	12215057
GRCz11	19	12134585

KASP Assay ID:

554-0722.1 (used for ordering genotyping assays)

KASP Sequence:

GTGCTCAGAAAAAAGTGGAGCGTCAAACTGAGCTCAAGCGCAAATTTGAA[C/T]AGATGAAGCAAGACCGCATGACACGCTACCAGGTCAGTGAGACTGAGCTT

Long Flanking Sequence:

CGCAAGGAGAGGGAGGCTGAGCTTGGTGCAAGAGCCAAAGAGTTTACCAACGTCTACATTAAAAACTTTGGAGAAGACATGGATGATGACAAACTTAAGGATATCTTCAGCAAATATGGCGAGTTATTTGCATAAGTCTCATGCATTAACTATTTTCATGGTTTATACATTTAAACAAAAACCTTTCCTTGTTTTGTAAGGTAATGCCATGAGCATCCGTGTCATGACTGATGAAAATGGGAAATCCAGAGGCTTCGGGTTTGTGAGTTTTGAAAGGCATGAAGATGCCCAAAGGGTCAGTTCAGCTTTAATTGCAGTCAGACCAACATTTCTGTAGATTTCTTGGAATGAACGTGAAACCGTGTATTGTCAATGACTTTGCGCTCTGGTTACAGGCTGTAGACGAGATGAATGGCAAAGAAATGAATGGAAAGCTCATCTATGTGGGTCGTGCTCAGAAAAAAGTGGAGCGTCAAACTGAGCTCAAGCGCAAATTTGAA[C/T]AGATGAAGCAAGACCGCATGACACGCTACCAGGTCAGTGAGACTGAGCTTTGAGACTTGAGACTTGTACAGTGGATGCTGGGCATAAAAGTGGCTATATACAATTGTTTTTAGAAGGCATTTATGCAGCTGTCTTAAAGGGTCACGAAACACCAAAACACACATTTTTTGAGCTGTTGACAGTCGTATGTGTCCCACACTGCTAAAAACACTATTAGGACACATATATTTCGCTAAAAAGTGTAAATTGGTTGTTTTTGCGTTATTTCAAGCAAATTTGTGCTTCCGGTTTGAAACTAATTTTTGAAGCTGCGTCAGGGTCATGAGATAATAACATGTATTCCAGCGTGGAGACTGGGCGCCTGTGCCAGAGTGTGCCTAATTACGTCTCAGAGTGTGCTGCATTAATGCATGAGTAAGGCTTGGTTCAAACCAATCAGTGCGCTCTATTGTGCAACTTCATTAATATTCATTACTGTCATAGTGTTAAGACGACAGAGA

Associated Phenotype:

Not determined