ZMP
si:dkey-229d2.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate transmembrane channel family [Source:UniProtKB/TrEMBL;Acc:A2BFV3
Human Orthologue:
TMC1
Human Description:
transmembrane channel-like 1 [Source:HGNC Symbol;Acc:16513]
Mouse Orthologue:
Tmc1
Mouse Description:
transmembrane channel-like gene family 1 Gene [Source:MGI Symbol;Acc:MGI:2151016]
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa11855 | Nonsense | Available for shipment | Available now |
sa807 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11855
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000098446 | Nonsense | 557 | 720 | 17 | 20 |
ENSDART00000131515 | Nonsense | 511 | 733 | 13 | 17 |
Genomic Location (Zv9):
Chromosome 5 (position 27302864)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 25058162 |
GRCz11 | 5 | 25658315 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTGTTAATCTGTGTGTTTGTTTCAGGATGGGTGCATTCTACGCWCCATG[T/A]CTTCCAGCACTAAATCTTCTTCGTCTTCACGTGTCTATGTACCTGCAGTG
Long Flanking Sequence:
AACAGAATAAAAAAATTCACAAGGTTTTGATGGTGAGTAAATGGTGAGTACCTTTTAATTTTTGGGTGAACTATCCATTTACATTAACATCTCTTATTTCTACAGGAGTTTGTTCGTCTTATCATTTCTGACACAATGACGACTTACATCACTCTGCTGATTGGGGATTTTATGCGTGCCGTACTGGTGCGATTCCTGAACAACTGCTGGTGCTGGGATCTGGAGTATGGCTTTGTGAGTGAGTGTCCACCACACATAGCAACATATGCATCACGACTTCCATAATTACATTTGCTTTCTTCATTAGCCATCCTACTCAGAGTTTGATGTTAGTGGGAATGTTCTGGGGCTGATCTTTAACCAGGGAATGATCTGGTAAGAATTATCTCCATATTATGTTGCATTTGCTTTCTCCTTTTTCAGAAATGAAAACCAGCATATAATCAAATCTTTGTTAATCTGTGTGTTTGTTTCAGGATGGGTGCATTCTACGCTCCATG[T/A]CTTCCAGCACTAAATCTTCTTCGTCTTCACGTGTCTATGTACCTGCAGTGTTGGGCAGTGATGTGCTGTAATGTGCCTCAGGAACGCGTCTTCAAAGCTTCAGGCTCCAATAACTTCTACATGGCCATGCTGCTGGTCATTCTTTTTCTCTCTACATTACCAGCCATATACACCATTGTCTCCATTCCTCCCTCCTTCGACTGCGGGCCCTTCAGGTTCTGAAATCAATTAGTTTATATGCATTAGGAAAGTAGTGTTTGACATATTGGTCATTTCAAACATGTCAATTATTTTAAAGTATGGAGTAACAGAGGTGATGAAAAAGAAGTTGAGGGATGTTTCCAATTCCAAGTTTTGCAATCGGTAAATCTTAACACTAGGGTGCAGTAGAGGGCAAGTGTTAGAGGTTCTCACATCCTTATTTCTGCTCATAATTGTTAGTTATTTTATATAATAAATATTATTATATAACTATTACATATATATAACTATTAACTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa807
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000098446 | Nonsense | 698 | 720 | 20 | 20 |
ENSDART00000131515 | Nonsense | 652 | 733 | 16 | 17 |
Genomic Location (Zv9):
Chromosome 5 (position 27298017)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 25053315 |
GRCz11 | 5 | 25653468 |
KASP Assay ID:
554-0712.1 (used for ordering genotyping assays)
KASP Sequence:
AAAAANTCAACAGGTCATGTTTAGTCATATATCCAATTTTGTATTGACAG[C/T]AAAATGAGGAAAACAAGAAAAAGAACAAACTTGCAGCCTTAAAAGCAGCC
Long Flanking Sequence:
TGTGTGATGGTTTGATTGTTGATGGTCACAGGCCTATGGAATCTAGTAAAATATTATGTACTGTCATCATGGCAAAAAAAAAAAAAATAAATCGGTTATTAAAACTATCATGTTTAAAAATATGTTGAAAAAATCTTCTCTCCGTTAAACAGAAATAAGGGAAAAATAAACAGGGGGACTTGTAATTCTGACCTCAAAATATTTAAAACACACACACACACACACACACACACAAAAACACACAAAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATATTATGACAAAACAAACTAATTAATCTTGACCCAGCACTAATATATAAATAAATAAATTGCAGCGCTGAACTTTGATCTCTTTGCTACTGTTAAAAAAATCAACAGGTCATGTTTAGTCATATATCCAATTTTGTATTGACAG[C/T]AAAATGAGGAAAACAAGAAAAAGAACAAACTTGCAGCCTTAAAAGCAGCCAGTGACTTGGAGCAGGCAAGAAAAGCTGGAGAGCAACGCAGAAACAGCATCTCAGATTTGGGTGAGAGCACACAGGATGGGTCACAGCTCCCATCAGTCAATGCACTAGACAGCAGCTTGGAACCGATGCAGGGAAACTTTCCGTTAATGTTGAAGTGTCAATGTGCTTTGCTTAGACAACGGGCCACAGTCTTAAATCAACATGCCCCTGTTTCTTTATATAAGTTAAAGGTCTCTTTGTGTCTACTCTTTCTCAGGAGTGAATGAAGAGAATCCTGAATCTCACGTTTCCTCATCCCACACATCCAGACCCCCTGCGTCCCGTGGCCACACATCATCTGGACATCTTCCAGGTCACCCGCAGCAGCCACAGAAAAATTCGAAGAAGAGATAAAAATCACACATAGATTTCAGTGTGTTTGTCACAATCACAACATTTAGCACTTATTT
Associated Phenotype:
Not determined