ZMP
tsc22d1
Ensembl ID:
ZFIN ID:
Description:
TSC22 domain family protein 1 [Source:RefSeq peptide;Acc:NP_997910]
Human Orthologue:
TSC22D1
Human Description:
TSC22 domain family, member 1 [Source:HGNC Symbol;Acc:16826]
Mouse Orthologue:
Tsc22d1
Mouse Description:
TSC22 domain family, member 1 Gene [Source:MGI Symbol;Acc:MGI:109127]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa7626 | Missense | Mutation detected in F1 DNA | Not yet available |
| sa2483 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa7626
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Missense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000055868 | None | None | 145 | None | 3 |
| ENSDART00000131267 | Missense | 65 | 838 | 1 | 3 |
| ENSDART00000131626 | None | None | 118 | None | 3 |
| ENSDART00000143165 | None | None | 145 | None | 3 |
| ENSDART00000145401 | None | None | 133 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 19432591)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 18806833 |
| GRCz11 | 9 | 18814545 |
KASP Assay ID:
554-4166.1 (used for ordering genotyping assays)
KASP Sequence:
CATGGATGTGTCTCTTCCACGGGCCAACAATTCAGGAGGWCCTGAAAGAA[G/T]CTCCTCTGAGGAGACGCTGAATAATTTTCATGAGGCGGAGACCCCTGGTG
Long Flanking Sequence:
AGCAATGAATCACCACGAACGATCCGGAGACTCCGGCAGCGCCCGAAAAATGGTTTACCCCATGAGTTTACCCAGACGGGAGAACAGCAGCAGCACAGTAGGTGGTTCCTCTACATTGACAACTTCAGCAAGCACCAGCCTTAATAGCAACAACTTGATGCTGGCGGATGAATATTCCCCACCAGTGCTGATTCAGTCTCAAACGCAGACTGCGTCCTCGCTCGGGCCCCAGAACCCTCCGCATAGCCTGAGTATCCCCTTGCAGACACCCATGTTACCCCAAACGTTGCCCACTGCAGTTGCACAGATGAAGAAGAAGAGTGGCTTCCAGATCACCAGCGTCACCCCGGCGCAGACATCTGTGAGCACCAACAACAGCATTACAGAAGACACAGAGAGTTGTGACGACCTGGATGAGTCCCACACAGAGGACTTGTCATCCTCTGAAATCATGGATGTGTCTCTTCCACGGGCCAACAATTCAGGAGGTCCTGAAAGAA[G/T]CTCCTCTGAGGAGACGCTGAATAATTTTCATGAGGCGGAGACCCCTGGTGCCCTGTCACCCAACCAGCCACCCATTATAACCCAAGCACACCTGCATGGCACCATGGTTAACGGAACTGTTCACCACCACCATCACCACCACCACCATCATCACCATCATAATCCTGTTTCCTCTGGAAAAACCCATCCTGCTGGAGGGACACTGATTGGGGTACCTTTGGGTGCCCCGGTCACATCTGTGGTGACCTCAAGTTCGGCTAGCACAGGCCAGAAAATGCCTTCAAATGTGGTGGGATTGATTGAGAATGCCTCTGTTGGCACAACTAGTGCCATCGGACAGCCTTTGGCTACTCTCGCCTCTGGAACTGGAGTGATTTCTGTGACTTCAGGTGCCACGATTAGTACTGGTAATACTTTAACTAATAATGTTTCCGTGTTAAACTCTGCCAGTGTGCCTGTTGTGGGTGGCAAGACTACCAATAGTAGCAGTGTAAACTACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2483
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000055868 | None | None | 145 | None | 3 |
| ENSDART00000131267 | Nonsense | 599 | 838 | 1 | 3 |
| ENSDART00000131626 | None | None | 118 | None | 3 |
| ENSDART00000143165 | None | None | 145 | None | 3 |
| ENSDART00000145401 | None | None | 133 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 19430990)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 18805232 |
| GRCz11 | 9 | 18812944 |
KASP Assay ID:
554-2479.1 (used for ordering genotyping assays)
KASP Sequence:
TGGTCCAGGTTGTGCCGCAGCTGGTGCAGTCCACYGGCACCACTCTTATA[C/T]AGCAGACACCAGGCCAGCAGCTCACCTCACAACCCTCCATGGAGCAGCAG
Long Flanking Sequence:
CAGCAAACATTCAGCAGCAACCGCCTGCATCTATCGGAGGATTGCAGACCACGATTGTTCAATCGTCTGCACCTCTACCCTCTCATATGCCCAAACTGACATATGCCCAAGCAGCCCAATCCCCTCCTGCTCAAGCTCTGCCTGTGGTGACCCAGCAGCAGATGGGCTATCCGCCCGCACAGCAGCCAGCTGCACCAGCCCAGGTAGCACCAACACATGTTAACCCCTTAAGCCAGGGAGGCAGCCTGCCATCTGACTTCTCCCAATCCAAGCAGATCCTGAGCACTGTGCCACCTGGGTCAACAAAAACTCTGCCCCACCTGTCCGCCTCCATCCCTCCTGTGGCTCTCGCTGGTAATGGTCAGATGATCACACCCTCCTCGCAGCCCCCTACTGCTCAGCCACTTCCGCAAGGGCTCCTGCAGCCACAACAGACACCCGCCCCGCAGATGGTCCAGGTTGTGCCGCAGCTGGTGCAGTCCACTGGCACCACTCTTATA[C/T]AGCAGACACCAGGCCAGCAGCTCACCTCACAACCCTCCATGGAGCAGCAGCAGCAGTCACAGCTCGGCAGTCAAGCCCGTGGCACCCAGTTCGTCCCAGCCGTGACCTCATCAAGCGTGCCTCCTAACATTCAAAGTGATCCCCAGTCCAGTTTGTTTCAGAACGGCTCAAAGGAGACTGGGCCGCAACCTGCTGTTAGCACCCGGCCCTCGGTGATGCCGCTGGAGGATGCCCAGCTACTTCTGTTACAGCACCAGGCTCTGCTCGCACAAACCAAGCCAGCCGGTGGTGAAAGTGCCTCCCAAACCGGTACCTCTCGTGGTCCAGAGGGAAGCAGTGGAGTCAATGCCTTATCCGCCTCGGCCAGCCTGCTGAAGAGTTTACCTGTTGATGGAGAGGAGGATGGGTAAGTTCCACTGCTTGTTTTTTTTAATTGCATTGCTTATTTCAGTTCAATTTAGTTTGTAATTATTTCAGCTTTATTAAAAAAATCACACATG
Associated Phenotype:
Not determined