ZMP

trim55a

Ensembl ID:

ENSDARG00000029596

ZFIN ID:

ZDB-GENE-040718-50

Description:

tripartite motif-containing 55 [Source:RefSeq peptide;Acc:NP_001002358]

Human Orthologue:

TRIM55

Human Description:

tripartite motif-containing 55 [Source:HGNC Symbol;Acc:14215]

Mouse Orthologue:

Trim55

Mouse Description:

tripartite motif-containing 55 Gene [Source:MGI Symbol;Acc:MGI:3036269]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa44543	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa7518	Missense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa44543

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000047055	Essential Splice Site	172	443	3	10

Genomic Location (Zv9):

Chromosome 2 (position 42226104)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	42275568
GRCz11	2	42124986

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCAGACCTGTGAGGTCGCTCCACTTAAATCTGTCTATGAGTCCCAGAAAG[T/C]AAGACGTTTACCCATCGTTCTGCTTCCTCTCTCTCCACTGCTGTCTTCAT

Long Flanking Sequence:

TGGAACTTTTTTTTGTACATAGTGTAAAGCACAATTTTAAAATAAAATGAGAATGCACCTTATTTCATTAACAGCTAAGATGATCATGAAAAATATAGCAAAAATGAAAATGTCTTCTTTCCCAATGCTGGGTTGCAGCTGGAAGGGCATCTGCTGTGTAAAACATATGCTGGATAAGTTGGCGGTTCATTCCTCTGTGGCGGCCCCTAATGATGAATACAAGGACTAAGCTGAAGGAAAATGAATGAATGAATGAATGAAAAATATCTTCATAAGGATGCTCAAGGGTTTAGTCAGATCTGTCTGATTGTGTGTAAGCAGCAGTAAACCTGAGCCACAAGTGAAGGAAGAGGTGCTGATGTGCGAAGAGCATCAGGACGAGAGGATTAATATCTACTGCGTGACGTGCTCTGTTCCTACTTGTTCGCTATGCAAAGTGTTCGGGAGTCATCAGACCTGTGAGGTCGCTCCACTTAAATCTGTCTATGAGTCCCAGAAAG[T/C]AAGACGTTTACCCATCGTTCTGCTTCCTCTCTCTCCACTGCTGTCTTCATGATGACTGACCAGTTTATGTGTACATCTACAGACAGAGCTGTCCGATGGCGTTGGCCTGTTAGTTGGAAACAATGACAGAATTCAGGGAATTATCAGTCAGCTAGAGGAAACCTGCAGATCTGTGGAGGTCAGTGTGTTCTTTATTCTTTGTTTAAGAACAGGAACAATACTCAGTTTTTGTACCATAATGCACAACATAAACCTTTATGTAAAGTATTTAAAGTTTACCTTTAACTATTGAACTTTTTCAAGGTTAAAAGTTGTTGAAAGAAAGGTCAAGGTCCCATAATGCAATTCAAAAGCATTAATAAACGACAAAAAAGAACAAAAAAAAAAAAACATGAACCACAAAATACAGAACTGTTAATTAATAAAAATGAACTATTTTTATGTAGTGATGTCCGCGCATGTGTGTTTGTGTGCAGGAGAACGGTCGCAGGCAGAAGTCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa7518

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Missense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000047055	Missense	283	443	7	10

Genomic Location (Zv9):

Chromosome 2 (position 42223300)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	42272764
GRCz11	2	42122182

KASP Assay ID:

554-4056.1 (used for ordering genotyping assays)

KASP Sequence:

GCAACCAAGTTTTTCTAGTGAAAKTTCTTATCAATATRTCTCTCTTACAG[A/T]ACACGAAGCCTCTGCTACAACAGTAAGAACCAGATATTTATCTTTATTCT

Long Flanking Sequence:

TGTCTCAGTAGTCCTTCATTAGCATAGAAAGAAATTTTCTCAGCTTACAGGGCTAATAATATCGACCTTAAAATAATGATAACTAAAATAATAAAAGTTTTTATTCCAGTAAAATTCAAATAAATAAGACTTTTTCCTGAAGATTAAATATAATAGAAAATATTGTGGGTGTCCTTGCTCCGTAAAACATCACTTGGGAAATAATTGAGAAATAATTCAAATGTCATGTTATTTTTTAACACTTTTCTCTACTACTAAGTATCTTTACGTTTTCATAATGTATAATACTATTATCATCTGTGCAGGTACAGAGAGCATCTGGATAACTCAGCTAAACTAGTGGAGACAGGAATTCAGACAATGGAGGAATCTGAAATGGCTATCTTCCTGCAGGTCTGTGAAGTTCTTCATTGTGATCTTGCATGCTTTTTTTTTAAAGGAATTAAATATGCAACCAAGTTTTTCTAGTGAAATTTCTTATCAATATGTCTCTCTTACAG[A/T]ACACGAAGCCTCTGCTACAACAGTAAGAACCAGATATTTATCTTTATTCTGCATCTAAACTCTTTTATTTAGTCAACTTATTCATTCTCGTCTCTTTAACCTCAGGATTGCAGAAAGCCGGAATGTGTCTCACTTAGAGAAGGTTGAGCGTGGATATGAAAACATGGATCATTTCTCTGCAAACTTCCAGTCGGAGCGAAGAGCAATCCTCAGTATAGACTTTATCAAGGGTAAACCAACTCTAATCCTTTCAGTTTAATTTTAGTCTGTCCCTTTATTGACCTTATTCTTATATGTTAAAGCAAGCACAGCCATCGGAACCTAATTGGCCTAAAAGACTTCTGTTCTCATTCACTTAAACTTAAAGAACAAGCTTGTTATGCTGACTGATTTTACAAACTGTTATTTTTATATATTTAGTCATAAGCACACTTGTTTGTAGAGAAAGTAGTTTGACCGTTTGTTATTCCAAGCCATTTTTCTTAGGGTTGCACATCATT

Associated Phenotype:

Not determined