Busch Lab

ZMP

prdm5

Ensembl ID:
ENSDARG00000006288
ZFIN ID:
ZDB-GENE-040708-1
Description:
PR domain zinc finger protein 5 [Source:RefSeq peptide;Acc:NP_001002301]
Human Orthologue:
PRDM5
Human Description:
PR domain containing 5 [Source:HGNC Symbol;Acc:9349]
Mouse Orthologue:
Prdm5
Mouse Description:
PR domain containing 5 Gene [Source:MGI Symbol;Acc:MGI:1918029]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa37594 Nonsense Available for shipment Available now
sa24242 Nonsense Available for shipment Available now
sa14875 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa37594
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127443 Nonsense 109 634 4 16
Genomic Location (Zv9):
Chromosome 23 (position 2047085)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 2015180
GRCz11 23 2025588
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACTCTGTGTGTGTGTGTGTGTGTTCACAGGATGGAGAGAATATCTTTTA[T/A]CTGGCGGTTGATGACATCGAGACGGACACGGAGCTGCTGATTGGTTACCT
Long Flanking Sequence:
CAATATAAAAGCCAGACACTAAGCTTTCTTTGCACTGCAACTGATAATCAACAGTCAAAATGGCAAGTTGTATCTCTTCCCAACAGAGAAAACCAGCAACAATGAAGAATGCATGACTATATGGAGTCATGGCTTTGCAATAAATAAATGTGATTATAATGGAAGTCAAAGGGGCAAAAACAGCCCCCAACACAACGAAAGGGTAGTAAATTTGCCTTTAAATTTGTGCATTGTTGAATTTTTGACAACTGACAAAGCATTTTCCAAAATATGTGTCAAAATAAGATTTAAAATTTATCCCCAAACATCCTCCCATTTGCCGATACACGGAAAAAGCTAATACTAAATCACCAGTGCAACATCAAGCAGCATAACAAGCTGATTTTAACTTTTAAAAATCTGCATATCGTCTTTTCTGACCCGTTTAATATATCTCAATGTGCTTTCTCTCACTCTGTGTGTGTGTGTGTGTGTTCACAGGATGGAGAGAATATCTTTTA[T/A]CTGGCGGTTGATGACATCGAGACGGACACGGAGCTGCTGATTGGTTACCTGGACAGTGATATGGAGGAGGAAGAGGAGGATCTGGAGGAAGAGCAGGACATCAAAGATGAAGACGAGAACAGTAAAGACAGCAAACAACTCAGTGCAGACACAGGTGTGTGTTCAGTGGCTCTCTAAAGGCCTAGTTCTCACTACATGACTTAAAACATAGGCAGATCACTGTGCTGTTCAGACTACCTGACTTGATTTATTCATTCATTCAGTTTCTTTTCGGCTTAGTCCCTTTATTAATCCAGGGTCACCACAGTGGAATGAACCGCCAACTTATCCAGCACGTTTTTATGCAGCGGGTACTCTTCCAGCCGCAACCCATCTCTGGGAAACATCCACACACACTCATTCACACTCATACACTACGGACAATTTTGCTTAGGAAATTAACCTAAAAATAAACGAAAGACACTTGGCAAATGATCATTTTGACACCAGGCATGATCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24242
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127443 Nonsense 155 634 4 16
Genomic Location (Zv9):
Chromosome 23 (position 2046949)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 2015044
GRCz11 23 2025452
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGAAGAGCAGGACATCAAAGATGAAGACGAGAACAGTAAAGACAGCAAA[C/T]AACTCAGTGCAGACACAGGTGTGTGTTCAGTGGCTCTCTAAAGGCCTAGT
Long Flanking Sequence:
GCAATAAATAAATGTGATTATAATGGAAGTCAAAGGGGCAAAAACAGCCCCCAACACAACGAAAGGGTAGTAAATTTGCCTTTAAATTTGTGCATTGTTGAATTTTTGACAACTGACAAAGCATTTTCCAAAATATGTGTCAAAATAAGATTTAAAATTTATCCCCAAACATCCTCCCATTTGCCGATACACGGAAAAAGCTAATACTAAATCACCAGTGCAACATCAAGCAGCATAACAAGCTGATTTTAACTTTTAAAAATCTGCATATCGTCTTTTCTGACCCGTTTAATATATCTCAATGTGCTTTCTCTCACTCTGTGTGTGTGTGTGTGTGTTCACAGGATGGAGAGAATATCTTTTATCTGGCGGTTGATGACATCGAGACGGACACGGAGCTGCTGATTGGTTACCTGGACAGTGATATGGAGGAGGAAGAGGAGGATCTGGAGGAAGAGCAGGACATCAAAGATGAAGACGAGAACAGTAAAGACAGCAAA[C/T]AACTCAGTGCAGACACAGGTGTGTGTTCAGTGGCTCTCTAAAGGCCTAGTTCTCACTACATGACTTAAAACATAGGCAGATCACTGTGCTGTTCAGACTACCTGACTTGATTTATTCATTCATTCAGTTTCTTTTCGGCTTAGTCCCTTTATTAATCCAGGGTCACCACAGTGGAATGAACCGCCAACTTATCCAGCACGTTTTTATGCAGCGGGTACTCTTCCAGCCGCAACCCATCTCTGGGAAACATCCACACACACTCATTCACACTCATACACTACGGACAATTTTGCTTAGGAAATTAACCTAAAAATAAACGAAAGACACTTGGCAAATGATCATTTTGACACCAGGCATGATCAAACTGTCTATACTAGATGTTGAATTGGACATAGGTTGACTCATTTGTATATACTACTTAATGAAGCACCTCCTAAGTGTAATTACTGCCAGGCTGCTCCTACCATAAAACATATTTTGTTGGATTGTGGAAGTTTGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14875
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127443 Nonsense 347 634 9 16
Genomic Location (Zv9):
Chromosome 23 (position 2027417)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 1995512
GRCz11 23 2005920
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAAAAAGTTCATCTCCACCAATCAGCTGAAGAGACACATGATCACACAYT[C/A]AGGTAAATTCACACACTAGTAAAGGTGATGATACACAGGCGACTTTAMAA
Long Flanking Sequence:
TGCCAAAACTGCTATTGAAGTAATAAAAACCGCAATATCGAAGTGTGAACTCTTGAAATGACATTTGAGAATAATATTTAATCAGACACATTTAAACATGTCAATTTATTTGTTCATTTTTATTTTTAGTCATTTATATGCATTGTTATGCTTCAATTATTAAATTAATATTTTGATCATTATAACTGGAACTCCTGCTCCCCCAAACTGCTTATGTGTGCGACTTTTCAAAATGCGCGAGACTTGAGTGTAATGGTCATGCATGTCCATCAATTGCATGGTTACAATAAAAAACAATGCACAAGTAGCGCACTGGAATGAAAAACAATGCATTCTGTTTGAATAAGCTCTAAAGTGTGCACTTATTGTTTTGAAGGTGTATGAATTATACACTAATTACATGTTGGTGCATTTTCAGGTTCATGAGGTGTTTGACTGCGACGCCTGTGATAAAAAGTTCATCTCCACCAATCAGCTGAAGAGACACATGATCACACACT[C/A]AGGTAAATTCACACACTAGTAAAGGTGATGATACACAGGCGACTTTACAAGCAACTTTTTCACAATATTACCCTTATTAGGCAACCAAATGAGAAACATGGCGACTATTTAGCGTTCTGGAGATTAGGCAACAGCCATTCTGCCACCACCATGCTATGCTGTAGGAATGGTATTAGCCTGGTGATGAGCGCTTCCTGGTTTTCTCCAAATGTAACACCTGGCATTCACTTCAAAGAGTTCAATTTGAGTCTCATTAGACCAGAGAATTTAGTTTCTTATGGTCTGAGAGTCCTTCAGATGCCTTTTGAGGCAAATTCCAGATTGGCAGTGGCTTCCATCTGGCCACTCTACCATACAGGGCTGATTGGTGGATTGCTGCACAGATGGTTGTCCTTCTGTAAGGTTCTCCTCTCTCCACAGAAGAACGCTGGAGCTTAGAAAGAGTGACCATCAGGTTATTGATCACCTTCCTGACTAAGGCCCTTCTCCCCCGATCACTC
Associated Phenotype:
Not determined