Busch Lab

ZMP

si:ch211-244a23.1

Ensembl ID:
ENSDARG00000040004
ZFIN ID:
ZDB-GENE-060503-789
Description:
fibrocystin-L isoform 1 [Source:RefSeq peptide;Acc:NP_001123871]
Human Orthologue:
PKHD1L1
Human Description:
polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:HGNC Symbol;Acc:20313]
Mouse Orthologue:
Pkhd1l1
Mouse Description:
polycystic kidney and hepatic disease 1-like 1 Gene [Source:MGI Symbol;Acc:MGI:2183153]

Alleles

There are 18 alleles of this gene:

Allele Name Consequence Status Availability
sa23518 Nonsense Available for shipment Available now
sa1501 Nonsense Available for shipment Available now
sa14766 Nonsense Available for shipment Available now
sa23519 Nonsense Available for shipment Available now
sa23520 Nonsense Available for shipment Available now
sa10779 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa23518
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050456 Nonsense 495 3895 15 70
ENSDART00000124987 Nonsense 521 4201 16 76

The following transcripts of ENSDARG00000040004 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 23433211)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 23362626
GRCz11 19 22946949
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATTTTAAAGGATGGAAGCCAACAAGCGCTATCAGAGAGGTTCAGATTT[T/A]GAGAATCAGCAGTGCATGTTTTTCTCTGAACACCTGTGAACTCACATACT
Long Flanking Sequence:
AGTCAAAATGGGAATGTGTTTTGCACTTTTTACTTGATGTTATTAATATTATATAAGTTGTACTGTCACATTTTTAGATGATTATTGTATGTTCTGTAAAATAAGGTATTTTAAACCTTATTTCAACTGAAAATTCTCTTCACGTGCTACAGGTACTATATTGAGGTTTTAGTGCACGGATATTCAGGATCAGCATCAGTAGATGTGGGCTTTTTCAAAGAGATCAGCCCTTTCACGGCCCAGCAGGCAGTCGAAGCTGTTAATGAGAAACAGCAGATTAATGCATACTACGATGTGCTGCCTGAAAAACAGGTTAGTAAAACATCATCTAATATAGAGGGTAGCCTCACAAGTTTATTTTCTGCTTTGTATTTATATAAGTTCAGTAGGTCTCATGGATGAGCTCCCATACATGTACAGTATATATACATTATTGTTTTGTTAGGTGGTTCATTTTAAAGGATGGAAGCCAACAAGCGCTATCAGAGAGGTTCAGATTT[T/A]GAGAATCAGCAGTGCATGTTTTTCTCTGAACACCTGTGAACTCACATACTACCAACTGGCATATGGAAATCTTACAACAGGTAGTTCTCAAATGAATATGTGTTTGAAGAAGGCAAACCCCAAATGTATTCTCATATATTTTTTTTTTTTTTGCGTTCACCCTTCAGCTCCATGTTTAATGCAATTGCTTTGTTTGCTCCAGGGCCAATCCTGGTTAGTGCGTCAGCGATGGATTTGCAGAACGCTCTGAATGACTTGTGGACGATTAAACCAGACAACGTTACCGTAACAAAGCAGGAACTGGACACTGAGTCGGTGTACAATGTGACGTTCAACTCTAAAAGAGGTGAACTTAAAAAAAATAATAATAATTCCTAAATTTTCTGACAATACAACATATGTGCTTTTATATTTCATTGTCTTGAGTAAGTGCCAATACTAAGGCTGTGTTTATGATACAAATGTGTTTTCATTTTAAATGGCTTTTTAAAATCAAAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1501
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050456 Nonsense 2408 3895 44 70
ENSDART00000124987 Nonsense 2595 4201 48 76

The following transcripts of ENSDARG00000040004 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 23465556)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 23394971
GRCz11 19 22979294
KASP Assay ID:
554-1426.1 (used for ordering genotyping assays)
KASP Sequence:
GGACAGTTCTTCAACAATACAGTGCATTCGCAGGGTTGGTTTGGCTTGTG[G/A]ATTTTCCAAGATTTTTTCCCCATGGAGACCGGCAGCTGCAGCTACTCAAC
Long Flanking Sequence:
CTCTTTTAGCTCTTCAATGTTGGACAAGCGTTCCGTCTAGAACGCTACCCAATCCATTGGCATCTGATGGGTGACGTTCATTTCAAGTCATATGTGCGTGGATGCAGTATCCACCAGTCCTACAACCGTGCCGTCAGCATCCACAGCACTCACAATCTGCTGGTGGAGCAAAACGTCATCTACAATATCATGGGTGGAGCCTTCTTTATTGAGGATGGCATTGAAACTGGCAACATCCTACAGTACAACCTGGCAGTGTTTGTAAAACAGAGCACCAGTTTACAAAATGAAGACATAACTCCAGCTGCATTCTGGATCACCAACCCTAATAACACCATTAGACATAATGCTGTGGCAGGTGGGACACACTTTGGGTTTTGGTACCGCATGCCTGATGATTTCAACGACCCAATTTATGATGCCTACATCTGTCCGAAGAGAGTGCCTCTGGGACAGTTCTTCAACAATACAGTGCATTCGCAGGGTTGGTTTGGCTTGTG[G/A]ATTTTCCAAGATTTTTTCCCCATGGAGACCGGCAGCTGCAGCTACTCAACTCCAACACCAGCAGTGTTTCGCCGCTTAACTTCTTGGAACAATGAGAAAGGAGCAGAGTGGGTGAATGTAGGATCGGTTCAGTTCAGTGAGTTCCTGATGGTCAATAATGAGAAGGCAGGAGTGGAGGCCAAGAGAATCATCTGGCACTATGTCAGCGGATGGGGACTGGATGGAGGAGCCGCTGTGGTCAACAGCACAATGGTGGGTCATGTGGATGAACTGGGATTAGGAAGTGACTACTGCACCAATCGTGGTATTGTCCTGCCCCTTGATGATGGGATGAGTGTCATCAACACAACATTTGTGAACTTCAATCGTTCATCATGCGCTGCAGTGAGTTTGGCAGAAATTGCTGAAAGCTGCTCACCTCGCTGTGGAGGCTGGAGCGCGAGGTTCAGTGGGATAAAGTTTTATCATTCACCAAACAAGGCCTGGCTCAGATGGGAACA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

Allele Name:
sa14766
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050456 None None 3895 None 70
ENSDART00000124987 Nonsense 2853 4201 50 76

The following transcripts of ENSDARG00000040004 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 23467103)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 23396518
GRCz11 19 22980841
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTAGGGTCATCAGTGCTACCGTTCCTTTATAMATTTATGACCCATTCATA[T/A]GGCTGGATGGCAATGCTCCCCACAGGCCAAACATACAACTGGTTATTTAA
Long Flanking Sequence:
CAAATCAAGTCAAAACAGAAAGCTTTGGATGAGATGTATAGGTTGTTTGTGGACAAAAACTTGACAAATGACTTGAAATAATTCAAAAGTTGAGTTGTGGTAACCATAATATAATTGGAATAATTGATGATAGACCATTTAATTATGGAAGATTAATCTACATCTGTGGAGTAGCCACTCCACTTCTCATCATGACTATATTACCACCCCTGGTGCACATTCATTTCTAATAATTTAACAACTGCTTATCAGTAATTCCTTACATAACACTTTGTCATGTCTGATATATTGCAAAAGATGCTAGATGTAGGTATATGGAGCCTTATTACATATTAAAGCTAAGAAGAACAACAATTCTGATGGGAATGTTCTAAGTTTGTTAAGTTGAAGTTAGTTGTAAAGGGTATAGTATACCTTAGCTGGAATACTTACTCACTTTCATTTCACTCTTTAGGGTCATCAGTGCTACCGTTCCTTTATACATTTATGACCCATTCATA[T/A]GGCTGGATGGCAATGCTCCCCACAGGCCAAACATACAACTGGTTATTTAATGGTGCCTCCCAAATCACTTCCATCTCATACTATGGAATGGTCTACAGCTTTCGGGTAAAGTGAACACATTACATATTTCAAACAAATGTATTGTTCATTCAAAGGAAAACTGTCAAAAGGTTTTGTTCCTTGACATTTGTTGTCATTTACAGTATCTGTGGAGCATTTAGAAAATTGTAAAGTCTCTTGTTGCTCAACAACAGTTCATAATGATTAAAAGTATAATCATTTAATTTCTGAAATGATTGTTCTCATTTTTTTTGATGTTCTAAATGTCTCATTAAGGCATTTAAATGCTAAATATTTCAATACACAAAGACACATTTAGATTATCTATAAAAATTGTTACAAAAAAGCATTTGTTTTATATTTATATTTGTAAAGTTATAATGTATTTTTAGATTTTTTTATAAAAAAAGGAAAAAGAAATTAAAACATTAAAACATTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23519
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050456 Nonsense 2953 3895 52 70
ENSDART00000124987 Nonsense 3244 4201 58 76

The following transcripts of ENSDARG00000040004 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 23471523)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 23400938
GRCz11 19 22985261
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAAATGTGGCTTTACTGACCAGGAACATCCAGATCATTGGTCAGGAGTA[T/A]CCGGATATGTTCACAGAGTCTTATGGAGCTCGAGTTCTGGTGGGAACCTT
Long Flanking Sequence:
ACCCTTGGCAAACAGAAATACGCACCATCGCTGCAGTCTCCGATTATGGCCGCACACTGACCTTGGACCAGCCTTTAACATATACACACATTGGTAAGTCCACCTAGATCCATAGAAATAATAGGAATTGTGCTGTATTCATAAACTGTTCCATTAAAGGTACATACAGTATATCAAATATAAAATTAATATGTGATAATGAGGGTTTTTATTATCATTACTTTTTGAAAGAAGATTCTTTTGCAAACTATAAAGACATTTTAATGTCACTTTTTATCAATTTATTACATACAGTACCCACCAAATAAAAGTATTTACTTAATTAAAAATGTCACACTAATGCAATCAATTATAATATTAATGAATGTATCGGCCTTAATATCAAATGTATCTGCTCATATAGGTGAGAGCTACAGTGTTCCAGGTACTTCAAGAAGTTATCAGCTTGCAGGAAATGTGGCTTTACTGACCAGGAACATCCAGATCATTGGTCAGGAGTA[T/A]CCGGATATGTTCACAGAGTCTTATGGAGCTCGAGTTCTGGTGGGAACCTTCTCTGGTTTCAGAGGTATAAACTTTAGTAAATTCTCATAAAGAACTAATAATACACAAACCACCAAATATATTTTGGGTTTATTCACTAATAAGTATTAGACTGTAAATATGAGGGAATTTTGCTGATGATAAGATTAAAAGAAAAACATTTTAGTAAGAGATAATCCTCAGTAGATGCAGGAAGACAATTAAGACCAGACTCTAAACTATGGAAACACTTGGGCTAAACAAACAGACTAATCATGGGAACATTGGATAACATACAGGCAAAGTCCACAACATTACATGAAAGATAAGACAAAAGAATTAGAATTTTGGTGTTTAAAAGACCGATATTATTTAAAGAAGTTCATGTCACAATAATATTTCTGCATTTGCATTTTGTTTTAGTTGTTAATCATCTCAATCTAGCACAGTTTAAGTAACACCTTTTCATTAATTCTATCATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23520
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050456 Nonsense 3366 3895 62 70
ENSDART00000124987 Nonsense 3672 4201 68 76

The following transcripts of ENSDARG00000040004 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 23476559)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 23405974
GRCz11 19 22990297
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAAGACTTGGATGGCAGTTTCCTGGGAGCTGTGGGAGCAGTGGTTCCC[C/T]AGTCGGAGTATGAATGGAATGGAAACCCTCGGCATGGACTGGGTGACTAC
Long Flanking Sequence:
TCCTCTGGGTGCTCCGGTTTCCCCCACAGTCTAAAAGCATGTGGGATAGGTGAATTAAATAAACTAAATTGGCGTAGTGTATGAGTGTGAATTAGTGTATATGGATGTTTCCCAGTGATAGGATGCAGCTGTAAGGGCATTCGCTGCATAAAACCTATGTTGGATAAGTTGGTGGTTTATTCTACTGTGGCGACTCATGTTTAATAAAGGGACTAAGCCGAAAAAAAAATTAATGAATGAATTGGGGTTAGGACTACCACTGGTTTAACATATTTGAAGCGTAACACTGAGTTTAACATGCTACTAAAGATACTAAAATGGGTGTAAAACAGTTTATTCTAATAAAGGTGGCTGAGTCATTTGTTATCAATTATTGGTTGTCTCGTATCAGCAAGGTGAACCCATCGGACTGTGTGGACATGGACTGTGATGCTAAGAAGAAGACTATGTTGAAAGACTTGGATGGCAGTTTCCTGGGAGCTGTGGGAGCAGTGGTTCCC[C/T]AGTCGGAGTATGAATGGAATGGAAACCCTCGGCATGGACTGGGTGACTACCGAATCCCAAAAGTCATGCTCACTTATCTCAATGGCAGCCGCATACCTGTCAATCAAATCTCTCCTTACAAAGGTACAGTACGTCTGAGTGCTGTTCATTATTCACAGTAATCTAAAAGAAATCACATGATGTGACTGTTTTATCTGTGCAGGTGTGATCAGAAGCAACTGTACCTACATGAGCACCTGGCAGAGCTACAAGTGCTTTGGGCTTAACTACAAGATGCTGGTCATCGAGAGTCTGGACACTGACACTGAAACCAGGCGTCTTTCACCTGTAGCCATCCTGGGGGACAAATATGTGGATTTGATTAATGGTATGACACCCCTGATGTCTATTTATTATCTTCTTTTTATGTGTCATATACTTAATGTATAATACATAAAATGGTAAGTTCTGTCATGAAACTCTATTGTTCGCCCAGGCATTACATGGTGTAGGTGGTTGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10779
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050456 Nonsense 3477 3895 64 70
ENSDART00000124987 Nonsense 3783 4201 70 76

The following transcripts of ENSDARG00000040004 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 23479498)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 23408913
GRCz11 19 22993236
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTACAGGCCCACAAGACYACAGCTGGTGCTCTGGCTACAYATGTCGGAAG[C/T]GAATTTCTCTCTTTCACGCCATTGTTGCCACAAACAAATCCTTTGAYAWC
Long Flanking Sequence:
TTCAATCTTTCACTCACTTGTACTTAGTCATTTTAGCGAACACCTCAGATACTGTTGGTTGTGAGTTGTCGGATACTGGTTGTGCGTCTTTTTTACCGACGCCATTATAACGACAAAGATCACTGCCTATTCACGAGTCCCGCAGAAAAAGTGATTGTCAGGTGGTATTTATGTGTGTATCTTGCCTTTATTCATTTACTGTATGATTTGTTTATGGGTAAAACAAAGACCATGCAGGTCAGTTGGTTTAAACGGTAGGCTACAAATAGTTAATTGGTCATTCATTAATTAATTATTCATAATCGAAAATCGAATCGAATCGTGCTTTTAGAATCGAAAATGTAATCGAATCGAGGATTTGGAGGATCATGACACCATTAATATTTACATACTATAAGCAGAAAAGGTTTCATTGTGTATTAATACATTTTAAAATCTTTGAATCTCTGATTACAGGCCCACAAGACCACAGCTGGTGCTCTGGCTACACATGTCGGAAG[C/T]GAATTTCTCTCTTTCACGCCATTGTTGCCACAAACAAATCCTTTGACATCTATTTCACCAGCACAACACCACAGAAACTGAGACTTATGTTACTGAATGCTGGACCTACCGAGGTTAGTCTGACGATGAAGATGTCACAGTATCTATGTTCTATGTTATATTGATGCTTGATTATATACATCATCAAACATTAGTTTTAGACAATATTTAGATTTTAGTGTTTTATTTACTATCTTACATCACTGTATACTAATCTTCCGTTGTCTTCAGTCTGTCAGAGTGGCTGTATTTTACTCAAACCCTCAGCGGTTGGATGTGTATGTTAACAATAGTTTGGTTGGTCCAACAAATGCTCAGTGGAATGTGGACAAAACTGACTACACATTGCTTGAGCCAACATATACAGGTAGAATATATCACAATAATGCATAATAATACAACTTGCCTAATGAACTTTTATTGTTCTGTGATTGGGGAATGGCTTGCCAAACTCTGTTTGA
Associated Phenotype:
Not determined