ZMP
si:ch211-222g23.4
Ensembl ID:
ZFIN ID:
Human Orthologue:
TBC1D4
Human Description:
TBC1 domain family, member 4 [Source:HGNC Symbol;Acc:19165]
Mouse Orthologue:
Tbc1d4
Mouse Description:
TBC1 domain family, member 4 Gene [Source:MGI Symbol;Acc:MGI:2429660]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34676 | Nonsense | Available for shipment | Available now |
| sa7334 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa13545 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa34676
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109137 | Nonsense | 227 | 1246 | 2 | 20 |
| ENSDART00000143766 | Nonsense | 211 | 1230 | 2 | 20 |
| ENSDART00000147813 | None | None | 202 | None | 5 |
Genomic Location (Zv9):
Chromosome 9 (position 31633005)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 30788951 |
| GRCz11 | 9 | 30599697 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAATGGGCAGCGGAACTCCACTGAAGCCCCTGTGGAGTTTATTATGGGC[G/T]AGGATCCGTTAAGTTCATCCCTCTGTGAAGTGGATGAACCAGAATCTGAG
Long Flanking Sequence:
CCGTTTCCTTTTCAAATAGTCAGTCTGCTTTGGCTTTTGTATTACTGACTCTTAAATTGCTCCTCAGGGGCTGAGCCTAGTTTAGTTATGCAACCTGCACGTCTCCCTGCAAAAGTTTAACATAACAACCGAGCCTTTTAATGGAGGTTTTGTCCTTGTTTGCCTTTTGGAATGTTGATTTAGAAGTTTTACGGTTGATCTGATGCCTTACCCTGTTTCCCCAGGTGCCTGAGGTTATTAGCAGCATCAGACAGGTGTCCAAAGCAGCTCTTAAGGAGGAAAGCAAGCCCAAGCAAGAAAGCGATGAGTCTTTCTACAACTCCCAAAAGTTTGAAGTGCTTTACTGTGGAAAGGTGACCGTCAACCACAAGAAAGCCCCGTCCACTTTGATCGATGACTGCATTGACAAATTTCGCCAACATGAGATTGAACGTAAACGCTTGCGGCTACTCAATGGGCAGCGGAACTCCACTGAAGCCCCTGTGGAGTTTATTATGGGC[G/T]AGGATCCGTTAAGTTCATCCCTCTGTGAAGTGGATGAACCAGAATCTGAGCCCAGCTTGACTGAGGAAGAGCTGTCTGAGGTGGGCAATGGGAAACTGGACCTGGCGAACTCCTCCAGTACGGGCAGCCTGCGAGGGGCCTTTCCTGAGTGTATCTTGGAGGACTCTGGGTTTGGGGAGCAGCAGGAGATTCGGACGCGGTGTAACAGCCTGGCAGGTGGCCTGCAGAAAAGACCCAGAGAGGCTGGCAAAGGGACGACTAGGAGGAGACATGCTAGCGCACCAAATAACGTGCAGCCATCTGATGCCGACAAGAACCGCACAATGCTTTTTCAGGTAATGTGGCAAGATACACCAGCCCGAACGAACAAGGACATGTATTTTGTTTTATGCATTGTCAGAAAAGCAAACTAAATTTGTTCTACAATGTACAAATGAGATCTTACAAATTAAAGGTGCAGTATATAAGTTTGATGCCCAGTGGTTGAGGCGCAGGTTGCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7334
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109137 | Essential Splice Site | 556 | 1246 | 9 | 20 |
| ENSDART00000143766 | Essential Splice Site | 540 | 1230 | 9 | 20 |
| ENSDART00000147813 | None | None | 202 | None | 5 |
Genomic Location (Zv9):
Chromosome 9 (position 31644043)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 30799989 |
| GRCz11 | 9 | 30610735 |
KASP Assay ID:
554-4449.1 (used for ordering genotyping assays)
KASP Sequence:
ACAAGTGYATTGSTTTTGTTTTCACTAGTTMATTTCATTGTTTGTTCYCT[A/G]GGGGGCGAGCCGTATGCGAAWGCGCCTGGGCAGCATGGGTAGTTTTGACC
Long Flanking Sequence:
TCCCAAAACACTTGCAATCAGCAGTAAAGGGTGTGTCTGGTAACAGTAGTTAAGATTTCAAATAAGGGTGAAATCATTTTGTTACTTGAGTGTGTTGCTTTCAGATATCAACACCCTTTTTCAATTTAAGCATATTCTTTACAGTGTTATTTTATTAATTTAAAATGTTTTATGTGCCATTTAACATGTTACCGTTTAGAGATATAAAAAAGGAGATCACTTGAAAATTCTCAATTCATATAGTAATATTTAAGCTGCTAAAAAATGAATGAAAGTAAATTGAGAAATGACCTCAAAGTGTTCTATAATGGTGCAACGTCTCATAAAAACTATCAATTGTTGCATGGAAAGAGCAGCTTGAACATTCTTCAAAATATCTGCTTTTGTTTTTATTAAAACATTCAAATTTGATAATGATCAAAGGCTTATTTGTTAAAGCATGACAATTGAACAAGTGTATTGCTTTTGTTTTCACTAGTTAATTTCATTGTTTGTTCTCT[A/G]GGGGGCGAGCCGTATGCGAATGCGCCTGGGCAGCATGGGTAGTTTTGACCGCGTGAGTATCACACAGCACGTGTGTTCCAGGATATGTCATTTTAACCTCAGCTCTTGTTCTTCTTCTGCTAAGAATCACGTCTCCGTCCTGCCGCTGCCACCAGTCATGTTTCTTCGGTGTCAGTTACTGTACCGCCACATGCTGCAAATGATACCAGTGCTGTGTTATGATAAACTACACGCTTATGTTTTTCATAATCAGCATGAGCAATATTATTGAAACTGGAGCTGTCAGCCCGGTCAGGGGGTCTCGCTTGTTTCAGGTGGGTTGTTTTGACCCTGCCCTCCTCTCGGTCTCAGTCGGGTGTGAAATGTGAGGTGTGTGTGATGGTAGGCTCGGGTCTCTGTGGAAAGCAAATCAGTCAGATCTTTCTTCACACTGGGTCCTCACGTGGCTTCAGAGAAGCTGTCAATGTGAGCGCTGTATTTCAGCTCTCCACAACATGCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13545
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109137 | Nonsense | 809 | 1246 | 13 | 20 |
| ENSDART00000143766 | Nonsense | 793 | 1230 | 13 | 20 |
| ENSDART00000147813 | None | None | 202 | None | 5 |
Genomic Location (Zv9):
Chromosome 9 (position 31657350)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 30813296 |
| GRCz11 | 9 | 30624042 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAAAGCCATCCACCAACAAATTCTGCTCATCAGAATGGAGAAGGAGAAC[C/T]AGCRCCTGGAAGGTCAGTTATTCTCTTTTTTATTTATTTACATTTGTTTC
Long Flanking Sequence:
TGCAGAGCTTTTTTAAGTTGACTCAAGTTGCCTTACAATTTTAAGTTGAGTAAATGTTTTTCTACAGTGATGTTGTTCCAACACAAATGAACATAGTTTATAAATGATATGAGAATGAACAAATGAAAGCAAAAATCCTTTTTTAAGTGTGTTATCTTAATGTTAAAAGTATAGTCATTTATTCTTGTTGCCTTATGGTTTTAGATATGGTCTTAGTCCCATCATAGTACATTTTATTATTATAAATTAATTCCATGCAACTAAAAGCGTGAATCCAAGACATTCTGTTGAGCATCTGCTGTTTTCCAGACCACATGGACGGTCGGGAGCTGCTGCCACTTTCTCCTCGGGCACTGACTCAGGATCAGGGGGATCAGACGGGCCCTCAGTCCCCAGAGCAGTCCTCAGCCGGACAGAAGCGGAGCCCAGCTGACTACAGGGGCCTGTGGAAGAAAGCCATCCACCAACAAATTCTGCTCATCAGAATGGAGAAGGAGAAC[C/T]AGCGCCTGGAAGGTCAGTTATTCTCTTTTTTATTTATTTACATTTGTTTCCTCCCACATTTCTCTTGTTTAGATTTGTTCTAACTTGTGCAGGCCCACTTCACTTAGTCACTGTTTGTTAAACAAAAAAATTTATTCTGTCAACATTTTCTAAACCTTGTGCCTTTTAAAAATTTTGATGAATTTTCCTTTCATGGAACACAAAAGGAAAAATAATGTTTATGCAGCATTTTTTTTTCTAAATAGGGAATGGAACAGTTATCAGGGGCTAACAAATTGGACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAAAGAAATAAAAGCAAACTCTTGTACTATTCGGATTCCTAAAGATGGTTCATTCCACTCGAATGATTCCTGATATTTATGGCTTCAGAGGACATGGAATGTAGTGTTTATTTTTTTAAAGAT
Associated Phenotype:
Not determined