Busch Lab

ZMP

hnrnpa3

Ensembl ID:
ENSDARG00000059351
ZFIN ID:
ZDB-GENE-060224-1
Description:
heterogeneous nuclear ribonucleoprotein A3 [Source:RefSeq peptide;Acc:NP_001038904]
Human Orthologue:
HNRNPA3
Human Description:
heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941]
Mouse Orthologues:
AC114648.1, Gm7551, Gm8991, Hnrnpa3
Mouse Descriptions:
heterogeneous nuclear ribonucleoprotein A3 Gene [Source:MGI Symbol;Acc:MGI:1917171]
predicted gene 6793 (Gm6793), non-coding RNA [Source:RefSeq DNA;Acc:NR_033513]
predicted gene 7551 Pseudogene [Source:MGI Symbol;Acc:MGI:3648704]
predicted pseudogene 8991 Pseudogene [Source:MGI Symbol;Acc:MGI:3644227]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa16864 Nonsense Available for shipment Available now
sa7170 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa27318 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa16864
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102934 Nonsense 140 234 4 8
ENSDART00000135273 Nonsense 140 312 4 11
ENSDART00000137210 Nonsense 140 234 4 8
ENSDART00000144822 Nonsense 140 241 4 8
Genomic Location (Zv9):
Chromosome 9 (position 1687746)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1696251
GRCz11 9 1698399
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTTGAGTGCTACGGCAAGATTGAGACCATYGATATCATGGAGGAGCGCT[C/A]GACTGGGAAGAAGAGAGGATTCTGCTTCGTCACCTTCGACGATCACGACA
Long Flanking Sequence:
AAGCATTACTGACTTGGCTTTGTTTACTGCAGCAAGTTGGCATGGCAACTGTTTCAAACCATTCCTGAGCGCTGCGTTTCACGTTTTAAGTGCAGAGATGCATTCTGCGTGAATGTCTCCCAAATCCGCGCATGTGGTGGACATTTTGCAGTAAAAACTGCCTGGTCGCACACAACAATTTTATGCACTCGCACAAATGCTCCCAAATATATTTTGAGGTCGCATAGATACAATTTCGGGCGCATATGCGGCCAAAATGGTCACATTTCTAGCCCTGCAACAGGCTTCCATACACTCAGTTCACTCTGAAATAAAGATCTCTGCATAATGAAGATGTAATTGAACATTCATTATCCAGGACTCTAATAAACCCGGAGCTCATCTGACAGTGAAGAAGATCTTTGTCGGCGGGATTAAGGAGGACACAGAGGAGTATCACATCAGGGAGTACTTTGAGTGCTACGGCAAGATTGAGACCATCGATATCATGGAGGAGCGCT[C/A]GACTGGGAAGAAGAGAGGATTCTGCTTCGTCACCTTCGACGATCACGACACCGTCGACAAAATTGTTGGTAAGCTTGAATGGAAAGGATCACTTTCAATGGCTAGTCAGACAAAGCAGAATACATATTTTATCTGTAAATTACAAGACTAAGTAAAAATAAACAACATTTTATGATGTTTTTATTTATTATTATTTTTAATTATTAGTGTGCATGCAGTAGGTCTGCATGATACTGAGAAAATATGCAAAATTCGACGTTGTCATTGAATACTGCGAACAATATTTCTTACAGTTTAACATTTTCCTACAGAGATACTGTTTTATTTGTGAATTGTGTTTCATTTATGTAATGATCATACTAAAATCAACAGATATTACATATTTTTCGTATCTAATTCAAGCAAAACAAAACTATTACGAGGCGCTAGCATTCACAACTGTTTCAGAGGCGAGGCGTAAGGCTAGTCTTAAATCAATTTACATTCATTCATTTTCATTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7170
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102934 None 215 234 7 8
ENSDART00000135273 Essential Splice Site 245 312 None 11
ENSDART00000137210 Essential Splice Site 215 234 None 8
ENSDART00000144822 None None 241 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1684656)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1693161
GRCz11 9 1695309
KASP Assay ID:
554-4671.1 (used for ordering genotyping assays)
KASP Sequence:
AACTATGGTGGTGGTCCTGGTGGATATGGAGGCGGCCGCGGAGGATACGG[T/C]GGAGGTCCAGGATATGGCAACCAGGGAGGTGGAGGAGGCTTYGGTGGATT
Long Flanking Sequence:
TTAATAATCTGATTAAGACAATACTCTGATTAAGAGTCTACCATGTAAACAGCAATTTCTGATGACCTTAATCTGACTAAAGTCATAATTGAACTACACAGAAATCGAATTAAGACAGTGGAGTAAATGGAGTATTCCTATTATTATTGAAGTGCAGTGCAGACTTGTAAACACTTTAATCAAACTATTACCGTTTTGTAGGACTTTTTGCTACATTTACTGCACTTCAATAATGTCACTAAAATAAATGTACTGCACATGTCTGAATTTAATTTCTATTTAGTTTAATTATGTCTTTAATCAGATTAAGGTTATCAAAAATCACTGTTTACATTGTCTTAATCAGAGTATTGTCTTAATTGTATTAAAATTGGAGTATTGGTGTCCGTGTAAACACACCCAGCGATATTTTCTGAAGGTCAGACTGATGTGTCTGTGGTTGTAGGCGGCAACTATGGTGGTGGTCCTGGTGGATATGGAGGCGGCCGCGGAGGATACGG[T/C]GGAGGTCCAGGATATGGCAACCAGGGAGGTGGAGGAGGCTTCGGTGGATTTGACAATTACAATGATAGAGGAAATTTTGGAGGTGTGTTATGTTTTAAAGGGCACCTATGATGCAAAATGAACTTTTAGAAACCTGTTTGGACAGAAATAAATGGAGAAATAGTGTATACGCCGCCATATTAGAATGGTATAAACTCATCAAGTCCTTTTTTTTTTTTTAATAAATAATCTAACGTTAATTTAAAATCCTAATCCCAGCGATTTTTGTATAAATGGAGGGATTAATAAATTAATCAATTGAAAAGTGATAAATTATTAAAATAAAAATAGAGAACAAAATGCATGAAATATTCTACATTAGAGATTTCTTACCTTTTTTACTTCGGGTCGCTTCTCACCTCTTTCTCTGTTCAATTTTGCAAGGCCCACTTACAGCTTCCATTTCCTCTTAGGAGTTGTTTGTTTCCAATGCGCTACTTTTCTTTTGTTTTTAAATGCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27318
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102934 Splice Site None 234 None 8
ENSDART00000135273 Nonsense 296 312 10 11
ENSDART00000137210 Nonsense 218 234 8 8
ENSDART00000144822 None None 241 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1682933)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1691438
GRCz11 9 1693586
KASP Assay ID:
2260-1366.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCTAACACTCAATCCTGATCATTGTCATTGCTCTGATAGGTGGAGGATA[C/A]GGCTCTGGTGGCGGAGGCGGAGGCGGAGGTTACGGCTCCAGGAGATATTA
Long Flanking Sequence:
TGTCATAAGTTCTGTTTCCTAACGTTTAAATCAAACAAAATCAGCATATTTTTTAGGTTGCCCGAGCTCATGTGCTCGCGAAAGGAACGAGATCACGACACCAACCTCATTTATGCCAGTGTTACACATTATCATCATCTAAATAATGATCGTCCGATTGCGCTGCTCTTCTGAAGTAATTCACAATTGGTCTTGATGGCGACTCTCCTCCAGAAATGACAGAGACTCTTTGTTTACAAGTTTGTGGGCATTTCAGTGGTTGCTGTCATGTGATGTGTATTTAGAGAGACAGACTGTACCTTGACTGTTACACTTTTTCCCATTCAAAACTATACGAGTGACACGTTTGTGTATTCTACAGTCTTTGATCTAAATGCGCGCATCATTTAGAATGCCTGTTCTTTGAAATTTAGAACAGGTTCTAAAATGGAACAGGTTCTCGATACTCTACCCTAACACTCAATCCTGATCATTGTCATTGCTCTGATAGGTGGAGGATA[C/A]GGCTCTGGTGGCGGAGGCGGAGGCGGAGGTTACGGCTCCAGGAGATATTAGCAGATTAATTGGAGTGGTAAGTTCAGCGCCACCACTGGAAAGCAAAACACAGCCTCGGCAGACGCATAACACAGGATGACTTGTGATGTTTCACCCTGTGTCTGTTCAACAGGCCTCAGACCCCCAGTTAGAGGGTTGAGAGGAAAGAAAAGCTAACTGAGAAACAGTGGTGTTTACTGTGGTGTTTACCGTTAGCCATCAGAGAGTGTAGTCAGACACTCCAGAAACTAGCCAATGGACATTCGCTTTTCTTTGTGCTCTTCTTCTTCCCTTGTGACTTTTGTTGAGCGTAAAACCAATATTATGTTATCAAACTAACTGTAGACAGAGTTGTGAGTTGTTGTGATGTTGTGGCCCTGAGTATATCGTTTGGTTTTATATTTTTGAGTTGACTCGAAGACAGTGATGTGATTTTATTTTTTGTCACGTGTGTTTTTTTATACATCTAT
Associated Phenotype:
Not determined