ZMP
nkx2.7
Ensembl ID:
ZFIN ID:
Description:
NK2 transcription factor related 7 [Source:RefSeq peptide;Acc:NP_571494]
Human Orthologue:
NKX2-3
Human Description:
NK2 transcription factor related, locus 3 (Drosophila) [Source:HGNC Symbol;Acc:7836]
Mouse Orthologue:
Nkx2-3
Mouse Description:
NK2 transcription factor related, locus 3 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:97348]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa7159 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa7159
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023639 | Nonsense | 118 | 269 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 8 (position 52509720)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 50296844 |
| GRCz11 | 8 | 50285490 |
KASP Assay ID:
554-5478.1 (used for ordering genotyping assays)
KASP Sequence:
CATTTACCGACTCCAGTTACAGCRGTAAAAACGGCGAGACACTCCRGGAG[A/T]AACCGAAGCAGAGGCTGCGCAGGAAACCGCGKGTGCTTTTCTCCCAARCT
Long Flanking Sequence:
CTTCGTGCATTCATGAGTAGAAAAAAATATATAGTAGTCAACATTTAAAGTAAATAATCACCTTTCAAAGTTGTCCTTAATCTATTAAACAACACCCAGTTATGTCTTTGGACAATTTTGAACAACTTTTTGATTCACTTTAAATGTTGACTACTGCATTTGTTTGCTCTTATTTTAATGTTGTTTTTAAATGCTGGGTTCCACACAATTCCTTCACGTTGTCCCAACACAAATTGATTGAGTTAACTTAATCGTTTTTAGAAAAATTAAAGTGGATCGAACATAAAATAATTACGTTGTAAATTTAGTTGTCTAAACTCATTTTGACAGATCATGTTTGTTGCAAATGGACACGTTTTTCCCCAATAAACGTTTGATGTCTTTCAACAACTTCCTGCGTGTATGAATATAAAATATACATTTGATTGCTTTCTTTTTCAGGCATGTGTCCATTTACCGACTCCAGTTACAGCAGTAAAAACGGCGAGACACTCCGGGAG[A/T]AACCGAAGCAGAGGCTGCGCAGGAAACCGCGGGTGCTTTTCTCCCAAACTCAAGTGTTTGAGCTGGAAAGACGCTTTAAGCAGCAGAGATACCTTTCGGCCCCGGAGCGTGACCACCTGGCTCTTGCACTGAAGCTCACATCCACACAGGTCAAAATTTGGTTCCAGAACCGGAGGTACAAGTGTAAGAGACAGCGGCAGGATAAATCCCTGGAGCTGGCCGGCCCGCGGAGGGTGGCGGTGCCTGTGCTGGTGCGCGATGGCAAACCCTGTCACGGAGCTCCGTACAATGTCACAGTATCATATCCCTACAATAACTATTACAACAGCTATGGAAATAACCCATACCACTGTAACTTCACTTCTGTGCCATCATTTGCCAACACGAGTCAAATACCCAATCACTTTGTGGACATGAATCTGACAACGGGAAGCGTTGATAGCATCAGAACTTGGTGAGACATCAGAGAAGAACTTGGATTAAAGACTCTTTTATCAAAT
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
swim bladder ZFA:0000076 |
aplastic PATO:0001483 |
abnormal PATO:0000460 |