ZMP
si:ch73-289n4.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
CACNA1F
Human Description:
calcium channel, voltage-dependent, L type, alpha 1F subunit [Source:HGNC Symbol;Acc:1393]
Mouse Orthologue:
Cacna1f
Mouse Description:
calcium channel, voltage-dependent, alpha 1F subunit Gene [Source:MGI Symbol;Acc:MGI:1859639]
Alleles
There are 10 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31671 | Nonsense | Available for shipment | Available now |
| sa13270 | Splice Site, Nonsense | Available for shipment | Available now |
| sa14651 | Nonsense | Available for shipment | Available now |
| sa21366 | Splice Site, Nonsense | Available for shipment | Available now |
| sa21367 | Nonsense | Available for shipment | Available now |
| sa1321 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa31671
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011078 | Nonsense | 364 | 1914 | 8 | 57 |
| ENSDART00000142712 | Nonsense | 324 | 659 | 7 | 15 |
Genomic Location (Zv9):
Chromosome 8 (position 46678445)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44867424 |
| GRCz11 | 8 | 44861330 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAGATGGAGGAGGACATGATCGGCTACATGGACTGGCTCATTGAAGCT[G/T]AGGATATGGATGAAGATGGAAATAAGCGTAATATAAACTTTATTTCTTAT
Long Flanking Sequence:
CTTTTTATAGTAATGTTAGCACATGTCGTCTGATTAGTTTTTTATTAACTGTGCCACTCAAGAAACTAAAATAAATGAATTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTACCATGTTTCTTTCAGATGAACGATTCTATTGGGTTTGAGTTGCCTTGGGTTTATTTTGTGTCTCTGGTCATTTTTGGTTCATTCTTTGTCCTGAATCTTGTATTGGGTGTGCTGAGCGGGTGAGTAATTCCAGCTCTTACACCTTTTAATAAAATGTTTTATAATATTCTACTAAATTAGTGAAATTATAAAATAGCATTAAGAAGGATTATGGTTACATCCTTTAAGGCTTACATTGTAATATTTTTTTTACCTCCCAGCGAGTTCTCTAAAGAGAGAGAGAAGGCAGTGTGTCGCGGTGAGCTGCAGAAGGCTCAGGAGAAACAGCAGATGGAGGAGGACATGATCGGCTACATGGACTGGCTCATTGAAGCT[G/T]AGGATATGGATGAAGATGGAAATAAGCGTAATATAAACTTTATTTCTTATTTTTATCACATGACAATCAAAATAAAAAAAAAATCAAAAGTTGACAATGAGCAATTGGCCCATTTTTACACTCAACAAAAATATAAAGTCAACTTTTGTTTACTTTTGTATTTTTTTTTGCTTTTACACCTCAACATTTGTTTCAGAACCTGGCGTGTTTGCCCTGTTAGCTTAATTTGTTTGGTATATGTGTACATAGCATTCGCGCTTTGATCCACGCCAAAACAATCGGTCTGAGATCTGAGCCTGAATGAGGTGAAAAAATTGACCAAAATGAACATTTGATTGTAACACAGGGAGAGACAGAGACAACTGAGGTGAGGATCCACATGCAGGTTTTATTCGGCAGTCAGGCAAGCAATGGTCAACACAGATGCAAACAGAGATATAAAGGCAAATCCAGAATCGTAGTCACTATAACAGGCAAGAGGTCGGTAGGCAGGCGGCAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13270
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011078 | Splice Site, Nonsense | 456 | 1914 | 16 | 57 |
| ENSDART00000142712 | Splice Site | 377 | 659 | 10 | 15 |
Genomic Location (Zv9):
Chromosome 8 (position 46682246)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44863623 |
| GRCz11 | 8 | 44857529 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATTTGCACATTTTACWCTTGCAAYTGTTAATTATTGTTCTCATCCTCAG[T/A]GAGYAACTGTACCACTTRAATGTAGTTATGAGGAWGAACTGTCGGGTTGC
Long Flanking Sequence:
TGGCTGGTACAAGCATAGTGAAGATGGAGGTACTGAGCATATTTTTATAAGTAATATATATGTTTGATATGTAAAAAGTTATAGGTTTTTTTTTTTATATTATTACATCTAAACACAATATTTTGTACAGAATCTGATTCTGATTCGGAGTTTGAAGCATTCCTGGATGATGACAATGGCTGCTGTGCTTCCATAATGTGAGCACAACATTCATTTTGTTGTTTCACATATTCTATAAAATAAGTTTTAACTGAGGATTAATACAGTTTCTTTCATTTTCTTAAGGGCACGACTGATGGCTATAAGTTTCTGGTAAGTGTTTGAGTAATTGCTGGAAAAACTGAAGTAAAAACTTTCCATGTTGAGCTGTTGAGGACCAGCAGACTAGCATTTTCCACACACCACAAATGTTTTTTTTTTTAGGAATCATTTCACATTCTTAAAGTATTCAATTTGCACATTTTACTCTTGCAACTGTTAATTATTGTTCTCATCCTCAG[T/A]GAGCAACTGTACCACTTGAATGTAGTTATGAGGAAGAACTGTCGGGTTGCAGTCAAATCCACCAATTTCTACTGGCTGGTGCTACTACTAGTGTTCCTCAACACTGCTGCCAGCGCTTCTGAACATTATGGCCAGCCCAAGTGGCTCACTGACATACAGGGTATGTGTGTGACCCTACAGTATCACCAAAGGGTTTGCCTTTATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAACGAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAGATTTACAGCTTCGGGTTTCAGATCTACTTCATGGCACTCTTCAATCGTTTTGATTGTTTCGTGGTGTGTGGTGGAATTCTGGAAACTGTGCTTGTGGAGATGGAGGTGATCCCACCCATTGGAATCTCTGTGCTGCGCTGTGTCCGTCTGCTCCGTATCTTCAAAGTCACAAGGTGATTCTACTCAAATGTGTATCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14651
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011078 | Nonsense | 458 | 1914 | 16 | 57 |
| ENSDART00000142712 | Nonsense | 379 | 659 | 10 | 15 |
Genomic Location (Zv9):
Chromosome 8 (position 46682250)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44863619 |
| GRCz11 | 8 | 44857525 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCACATTTTACWCTTGCAAYTGTTAATTATTGTTCTCATCCTCAGWGAG[C/T]AACTGTACCACTTRAATGTAGTTATGAGGAWGAACTGTCGGGTTGCAGTC
Long Flanking Sequence:
TGGTACAAGCATAGTGAAGATGGAGGTACTGAGCATATTTTTATAAGTAATATATATGTTTGATATGTAAAAAGTTATAGGTTTTTTTTTTTATATTATTACATCTAAACACAATATTTTGTACAGAATCTGATTCTGATTCGGAGTTTGAAGCATTCCTGGATGATGACAATGGCTGCTGTGCTTCCATAATGTGAGCACAACATTCATTTTGTTGTTTCACATATTCTATAAAATAAGTTTTAACTGAGGATTAATACAGTTTCTTTCATTTTCTTAAGGGCACGACTGATGGCTATAAGTTTCTGGTAAGTGTTTGAGTAATTGCTGGAAAAACTGAAGTAAAAACTTTCCATGTTGAGCTGTTGAGGACCAGCAGACTAGCATTTTCCACACACCACAAATGTTTTTTTTTTTAGGAATCATTTCACATTCTTAAAGTATTCAATTTGCACATTTTACTCTTGCAACTGTTAATTATTGTTCTCATCCTCAGTGAG[C/T]AACTGTACCACTTGAATGTAGTTATGAGGAAGAACTGTCGGGTTGCAGTCAAATCCACCAATTTCTACTGGCTGGTGCTACTACTAGTGTTCCTCAACACTGCTGCCAGCGCTTCTGAACATTATGGCCAGCCCAAGTGGCTCACTGACATACAGGGTATGTGTGTGACCCTACAGTATCACCAAAGGGTTTGCCTTTATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAACGAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAGATTTACAGCTTCGGGTTTCAGATCTACTTCATGGCACTCTTCAATCGTTTTGATTGTTTCGTGGTGTGTGGTGGAATTCTGGAAACTGTGCTTGTGGAGATGGAGGTGATCCCACCCATTGGAATCTCTGTGCTGCGCTGTGTCCGTCTGCTCCGTATCTTCAAAGTCACAAGGTGATTCTACTCAAATGTGTATCCAGCTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21366
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011078 | Splice Site, Nonsense | 511 | 1914 | 17 | 57 |
| ENSDART00000142712 | Splice Site, Nonsense | 432 | 659 | 11 | 15 |
Genomic Location (Zv9):
Chromosome 8 (position 46682498)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44863371 |
| GRCz11 | 8 | 44857277 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAA[C/T]GAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAG
Long Flanking Sequence:
GAGGATTAATACAGTTTCTTTCATTTTCTTAAGGGCACGACTGATGGCTATAAGTTTCTGGTAAGTGTTTGAGTAATTGCTGGAAAAACTGAAGTAAAAACTTTCCATGTTGAGCTGTTGAGGACCAGCAGACTAGCATTTTCCACACACCACAAATGTTTTTTTTTTTAGGAATCATTTCACATTCTTAAAGTATTCAATTTGCACATTTTACTCTTGCAACTGTTAATTATTGTTCTCATCCTCAGTGAGCAACTGTACCACTTGAATGTAGTTATGAGGAAGAACTGTCGGGTTGCAGTCAAATCCACCAATTTCTACTGGCTGGTGCTACTACTAGTGTTCCTCAACACTGCTGCCAGCGCTTCTGAACATTATGGCCAGCCCAAGTGGCTCACTGACATACAGGGTATGTGTGTGACCCTACAGTATCACCAAAGGGTTTGCCTTTATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAA[C/T]GAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAGATTTACAGCTTCGGGTTTCAGATCTACTTCATGGCACTCTTCAATCGTTTTGATTGTTTCGTGGTGTGTGGTGGAATTCTGGAAACTGTGCTTGTGGAGATGGAGGTGATCCCACCCATTGGAATCTCTGTGCTGCGCTGTGTCCGTCTGCTCCGTATCTTCAAAGTCACAAGGTGATTCTACTCAAATGTGTATCCAGCTCTTCCCAACAGGCACGCAACATCATAAGATGTTAGTATTAGGTTAGATTTTGGTCATGACATTAGGTGACCAAAATTCAGTTTAATTCAATTCAATTCAATTCAGCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTAGAACAGTGTAGTTCAGTTTTTAGTGTTTAAGTTCAGTTTAGTTCAGTGTGATTTAAAATCATTACTGAGAGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21367
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011078 | Nonsense | 1195 | 1914 | 35 | 57 |
| ENSDART00000142712 | None | None | 659 | None | 15 |
Genomic Location (Zv9):
Chromosome 8 (position 46702804)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44843460 |
| GRCz11 | 8 | 44837366 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCTCTCCTTTTGCTCTCAACATCTTTGTCTTGGATTTGACAGCATTA[T/A]TTTATAGATGCCTGGAATTCTTTTGATGCACTGATAGTGGTGGGCAGTTT
Long Flanking Sequence:
TCGTAGCGTCAGTGCGTGTATTATGCACTGAAAGCTCAACCAATAAAGATTTACATTCCCAAAAACCCTTCCCAACTTAAATTTTGGAAGATCATAAATTCCTCTCAGTTCGAGTATATCATGTTTGTCCTCATTCTGCTCAACACACTCACGTTGGCTGTACAGGTACACACACATACACATTTAAGCATGCTATAATTTCAATGTCCTACATAACTACATCACTAAATTGATTACATTACTGTGATCCCACAGCATTATGAGCAATCCAAACTCTTCAACTCTGTGATGGACATACTGAACATGATCTTCACGACGCTCTTTACTGTTGAGATGATCATCAAACTCATGGCTCTGAGACCTTATGTGAGAGTTTCTTTTACTTTTAACTTTGATCAAGGGATATAATATGCAGTCTTAAAACATGTTCATGTTTACGTTTCTGTTTTTTCCTCTCTCCTTTTGCTCTCAACATCTTTGTCTTGGATTTGACAGCATTA[T/A]TTTATAGATGCCTGGAATTCTTTTGATGCACTGATAGTGGTGGGCAGTTTGGTGGACATCATGATTGCAGAGCTGAGCGTATGTACTTATTCTGAAACTATTTCTCATGTATGAGAGAATCTCATCAATGCAAGTTTGTTTCATTAAAATGCATTATGCTTTGTTATCTTAAACACAGAAACTTACCATTTTTAATTTCAAATCTCTTCTGTTCATTTTCACTTCAAATCTCTGAAATATCCTGTTACTTCCCCAGGGTGGTGGAGGCCATGGTGAGGTAAGAATATGCCATAGTGATCTTGTTTAGCTGTGAAGATTTCAGCAAATAATTGCATCATTGGCCAGCACTATTCAATTAGATTTTTCTTTATCTTCATAGAGCATTTACAATGTGGATTGTCAAAGCAGCGTAGCATCAATTAAGAAAAGACAATAAAGGCTGGTAGGCAGGAGAGTAGGGAGCTGTTGTTGATATAGTCTTGCTTTCTACTGAATATCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1321
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011078 | Nonsense | 1874 | 1914 | 57 | 57 |
| ENSDART00000142712 | None | None | 659 | None | 15 |
Genomic Location (Zv9):
Chromosome 8 (position 46736911)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44809884 |
| GRCz11 | 8 | 44803790 |
KASP Assay ID:
554-1235.1 (used for ordering genotyping assays)
KASP Sequence:
AAGACCGCAAATTTGTTGACTTCGCAAAACGGGAGATTGCAGATGCCTGT[C/T]AAATGACTGTTGATGAAATGGAGAACGCCGCAACTGACCTTTTATGTAGA
Long Flanking Sequence:
ACGCAGCTTCAAAAATTTGTTTCAAACCGGAAGTACGAATTTGCTTGAATTACCGCAAAAACAACCAATTTACACTTTTTAGTGAAATATATGTGTCCTAATAGTGTTTATAGCAGTGTGGGACACATATACGACTGTCAACAGCTCAAAAAATGTGTTTTGGTGTTTCGTGACCCTTTAACAGATGTTTTTAATCCACCTCATTATGGTGGAACTTTATCATTTTAATTCTTTTATTTATTAGGTTGGAAAACAATTCTAAAAATATTGCCTTGAACTGTATGTATAAAAAGGCCTAGGCAAATTTTTTGTCATCCTTTTTGTCCTCAAATTGTCTAAGATCAAAAATAGGACCGTCTCTGTGCAACATCTGGTCTGACATTCGTTTTGTCTTGTGGTTTTTCCCTGTCTTTTAGATTCTGATTTCTGAAGGCTTGGGTCTATATGCCAAAGACCGCAAATTTGTTGACTTCGCAAAACGGGAGATTGCAGATGCCTGT[C/T]AAATGACTGTTGATGAAATGGAGAACGCCGCAACTGACCTTTTATGTAGAGGAAGGGCAGGGCAACCAACCGGACGCTTCGATGAGGATCTGTCTGATGAGATGAACTGTGTGATCTCGTACTAAATGAGCTTCAGTTTGATGCACAGGGAAGAAGTAAATTGTGAGTGTGATGTCATCAAAAACATTGACTTATTCATTTACTGAGCTCAGTTTGAAAGATGTAGTAATAGTTATATTCATTTCGAACAATAGACATGAGGAACATGTGATAACCACATAAACCCAATTGTTCATTTTCTTTTTTTATGGAAAAAAACTTTGGGAAAATATGAGATGATGCCAATGTTGGGTATGTATACAACACTTTCATATATTATATGTATGTTAATTATTACCTTACAGAGGAAAAAACACATTTGCTTCGGATGTGGTCAAATGTTAAAATGAAGCAGATGGTTTTGGATTATTTGTTAATGTGACATTACCATTACAAAATAC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |