ZMP
sdr16c5
Ensembl ID:
ZFIN ID:
Description:
short chain dehydrogenase/reductase family 16C, member 5 [Source:RefSeq peptide;Acc:NP_999936]
Human Orthologue:
SDR16C5
Human Description:
short chain dehydrogenase/reductase family 16C, member 5 [Source:HGNC Symbol;Acc:30311]
Mouse Orthologues:
Sdr16c5, Sdr16c6
Mouse Descriptions:
short chain dehydrogenase/reductase family 16C, member 5 Gene [Source:MGI Symbol;Acc:MGI:2668443]
short chain dehydrogenase/reductase family 16C, member 6 Gene [Source:MGI Symbol;Acc:MGI:2685269]
short chain dehydrogenase/reductase family 16C, member 6 Gene [Source:MGI Symbol;Acc:MGI:2685269]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa7094 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa7094
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000049264 | Nonsense | 245 | 306 | 6 | 7 |
| ENSDART00000129798 | Nonsense | 245 | 306 | 5 | 6 |
| ENSDART00000144009 | None | None | 240 | None | 5 |
Genomic Location (Zv9):
Chromosome 7 (position 59958105)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 58410714 |
| GRCz11 | 7 | 58713154 |
KASP Assay ID:
554-4904.1 (used for ordering genotyping assays)
KASP Sequence:
TGTGTATTTTGCAGATGGCCTAGACTCATGCCTATTCTTGACCCAGATTA[T/A]GCATGTAGGAAAATTGTGGATGCAATTCGAAGGGAACAGGTTTACCTTTA
Long Flanking Sequence:
CGATGTTTTCATTTCCTCAGCGGTTTTCCCCTTTGGCCATTGACTAGCAATAGCATAATCGCACCTGCTGGGGTGGTGGGTATAAAGATAGTGAGACCCCATTTGATTGATCAAATTAAAATAGAAAACTACAAAACCTGTGTGTGGAACACTCTCATGCTTGGCCATTAAATTAAATGTTACATTTTAAAATGATGCACTTTTTTAATAATTTGTGCAACACTATTTAGTACACTTTTATCTTTACTATAAATCTTCACAAATTTAAACTATTAGTTCAATAAGATAAATAAAAATAGTTTTTAGACTATGAAAATAGATTTATTTGCGGTTAAGACTATTAGCAGGTTTAAAGAAATAAAAACAATTGTCAAATTAGATAAAATACCTGAAAAGGAACCTGTTTAACTGCTTTGTCAGCACAAAAACTATTGGTCATGTTGTTGTTTGTGTGTATTTTGCAGATGGCCTAGACTCATGCCTATTCTTGACCCAGATTA[T/A]GCATGTAGGAAAATTGTGGATGCAATTCGAAGGGAACAGGTTTACCTTTACATGCCTCGGAGCATCTACATCATCATCGGTTTAAGGAAGTAAGTCAAAATGGATTCAGTGTTGAAGATCTGTTTTCCTTTTATATTTTATTACTAAAATGTAGACAATCATATTGAAGAACAGCAATTATTGATTTACTAAAATGTAGACATTGATATTGAAGAGCAGCATTTATTAATTTACATTTATATAGTATTGAAAAACAGTACATTATTAAAACAAAGGTTAATGGTTTACATTTACAAAAAAAAACCTGATTATGGTGATTATGTTTGCAATATTGCTGTTGTTGCTGAACAAGTCGCAAAGGCAACAAGATTTTCATTTTCCCAATTTTATATGTTTTAGGTAAGCTTAGATCACAATATACAGCATACAATAAAAGACTGCATTGCTGGTGTCATGACATTTTCCACTGGCTGAGCTTGTCAATAAATGCAATAAATGCA
Associated Phenotype:
Not determined