ZMP
npas4
Ensembl ID:
ZFIN ID:
Description:
Neuronal PAS domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q1ECW2]
Human Orthologue:
NPAS4
Human Description:
neuronal PAS domain protein 4 [Source:HGNC Symbol;Acc:18983]
Mouse Orthologue:
Npas4
Mouse Description:
neuronal PAS domain protein 4 Gene [Source:MGI Symbol;Acc:MGI:2664186]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa701 | Nonsense | Available for shipment | Available now |
| sa16063 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa701
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078154 | Nonsense | 6 | 933 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 14 (position 31512132)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 30302189 |
| GRCz11 | 14 | 30642503 |
KASP Assay ID:
554-0609.1 (used for ordering genotyping assays)
KASP Sequence:
AAGCTCAGAAAYAGTTTTCATCGTWGCTATCCACAATGTAYCGGTCCACT[A/T]AAGGAGCCTCGAAAGCTCGAAGGGACCAAATAAATGCGGAAATTAGGAAC
Long Flanking Sequence:
TCAGCATTGCTCGCACTGATATGAGACGTATAAATCCCTCTTGGCCCCCCTTTACTCCATCCCCCCTCCCCTCGCGCTTTTTTTACGTCGGTGTTGGCGCGTTGGGAGCCCCCCTGCTCTGGTGGAGCCCCAGCCTATATAAGTTACCGGCTTGCAATGTTACTCCACCAGATTTACGGACTCCCTATATCTGGGCGAGACACGGCTTCAGCAGCAGCCGACTGACTCAATCCCCAACCTGGAGGAAAGAACCATCTATCCTCCGGTCCCCGCAACCTGAGCCAGGCGCTGTGGCGGAACCGAAGGGGGAAACCCGGGAGAGGCAGGCGAATGGAGAACAGCCGAACTCTGGACATGTGCTGAGATGACACACCTGTGAACGCGCCTAAACTCTTTTGGGAAAGAGCCTAACACTTTTCTTAACTTGCAAGGCAGTCCACTTATTCAGCAAAGCTCAGAAACAGTTTTCATCGTTGCTATCCACAATGTATCGGTCCACT[A/T]AAGGAGCCTCGAAAGCTCGAAGGGACCAAATAAATGCGGAAATTAGGAACCTGAAGGACTTGTTGCCCATCTCCGATGCGGACAAGTCTCGGCTCTCCTACCTGCATATCATGTCGCTGGCGTGCATGTACACGAGAAAGTCTGTCTTCTTCAGTCAAGGTAAATATTTAAATATGTCTTAAAAATGTATAAAATCGAATAGAAGTGTGTAATCCTTAAAATATGAACTTTATAGACGCTTTATAGATCTGCGTTTGTGTTGAAGCATTCATGTACATCGCGTTCTTTATTTATTGAGTTGATGCAACAGGTGCATGTTTTTTTTGTAATATCTACACTGCATATTCGAATGATGATACAAATTGAAAAATATCCTTAAAAACGTACTGAAAACTGAAATTGAAACGTAATGAAAGTGCTTTAAACCGCCAATTCTCTCCATGGTGCTGAAACACAAACGCTGTCCATGGTGCTGAATTGTAAATCTCGCTACCGCGTTC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa16063
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078154 | Nonsense | 635 | 933 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 14 (position 31509233)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 30299290 |
| GRCz11 | 14 | 30639604 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GRAGTTCGGGGTCCRCTATACGTGGACGTCCCTCACGGGCCGCTCCCTTA[C/A]CCACCAGAAGGTCTCCTAACACCAGAAGCCTCACCTGGAAAACAGCCAAG
Long Flanking Sequence:
ATTTTGCTGCCACCGGCATTCCAGATAGATCCTCCTTTGCCAGTCCTGCCCCTTCCTCTTCCACCTGTGCCTACCTCCCAGGCACAACAGACCAAAGAGTTTGTGTGCACACCCCCATACACACCTCAGCTAGGTGGAAGCAATTTCCCCTTCGGGGAACCTCACTTTAGCTTTGATCCCACTGGAGCCACCTCACCACCTCCACTTGGTCAAACCGCAACAGTAACAACGACAACAGCACCATCTCTTTCTCCATCCGCGCCATCAAACCCACAAAGCAGCCCACCACCTCCAACAACAACACTCTCATCTCTTTTGCCACTCACGATAACATCTCCAACCACAGAGATTCTCTTTCCAGTGGAGCCGTGTAGTGGGTCACTCTATGAGAAACTCCCTCCTACTCCTGACAGTCCTGGTGACGGTGACTGCACAGTCATGACTTTACCTGAAGTTCGGGGTCCGCTATACGTGGACGTCCCTCACGGGCCGCTCCCTTA[C/A]CCACCAGAAGGTCTCCTAACACCAGAAGCCTCACCTGGAAAACAGCCAAGTCTGCCCTTCTTCTCCTCACTGCGTGACAGAGAAAAGGAGAGAACGGAGATCTCGCTTTTAGCACAGCACATCAGTACACTAGCAGAGGGCTTCTACCTAGATCCACTCCTGGCCAAGCTGGTCCCGTCCACCCTTTCTGAACACTCTCAGTCTCCGGACTCTGATGGACTTGATTCAATTCCACTGCTGGGTGAATTCTACCCACTCAAGTCCTGGAAAGGCTTGGACCTGCCCATCTTCCAGGATGACGAGTCGCTGTTCGAGGAGAGTGTCTTAGAGACCCTTCTCCAGGACCTCTCATCCTCCCCTCCGCTCTCACCGACTCCCTCTTCCTCCTCTCACTCTAGCCCCCCCTCTTCTCCCTCCACTCCTGAGTGCTGGTGTCCATCCTTGCACTTTGACGGGGTCTCTGCTGTGAGTGCCGGTCACTTCTGTAGCGTCCAATCGGC
Associated Phenotype:
Not determined