ZMP
si:ch73-26o5.1
Ensembl ID:
ZFIN ID:
Description:
Vacuolar ATPase assembly integral membrane protein VMA21 [Source:UniProtKB/Swiss-Prot;Acc:B8JLV7]
Human Orthologue:
VMA21
Human Description:
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:22082]
Mouse Orthologues:
2610030H06Rik, Vma21-ps
Mouse Descriptions:
RIKEN cDNA 2610030H06 gene Gene [Source:MGI Symbol;Acc:MGI:1914298]
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene Pseudogene [Source:MGI Symbol;Acc:MGI:3
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene Pseudogene [Source:MGI Symbol;Acc:MGI:3
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6971 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa6971
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000142112 | Nonsense | 4 | 104 | 1 | 3 |
Genomic Location (Zv9):
Chromosome 5 (position 24461234)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 22174106 |
| GRCz11 | 5 | 22677906 |
KASP Assay ID:
554-5463.1 (used for ordering genotyping assays)
KASP Sequence:
AACGGTTTTCTTATTTTGGTCGATGAAAAAAAACACAAAATGCAAAATTA[C/A]GACAAGAAAGAGGTGGGCTCAGTGCCCGGAGCCATGCCTRATTTCAGAGG
Long Flanking Sequence:
TACAGTATTATACTGCAAATGTCTGATATGCAGTAAGTTACTGTAAATGTTTGAAAATCACCCACAATCCAGTGCACGTTTGTATCTTTTTAAGTAGGACATACTTTAGGCTACTTCGTGGTGCTCTCTCTATCTCTCTCTCTCTCTCTGTTTAAATGTACAATAATAAAATAGTATGCTAATACTTACTGTGAAAGGTGATATGAACTGAATATCAAACTGTTCATATGAAGACAATATCCAGTCGTGTATGAGATCCAGAACATTATAAGGTTCTGAGAGTCTTTAATCAGTTCGCCGCCTGCACTGCTCGAGCGGCGCCCTCTAGCGGACATGCGCAAACACTGACAGACACTACTGCTGTCATGACCATACAGATCATGTGACAAAGACCCGGAAGCGCGAATAATTCAAGATGTCGCAGCACTGAATAACAAGGGATTGAGTTCCAACGGTTTTCTTATTTTGGTCGATGAAAAAAAACACAAAATGCAAAATTA[C/A]GACAAGAAAGAGGTGGGCTCAGTGCCCGGAGCCATGCCTGATTTCAGAGGGTAAGATAACCTGCATCGTATGCCTATTTCACATAAGTTAATTCTGCTCAAACTGCACGTGACCTCGTATCAAAATCACAATCAATAAACACATGAAATTTAGCGGATTCAAATCAACTAGACACCTTTACACATATTTAACATGAAGTGTACATGATAGTACACTTGATTTCGTTTAATATTCAGATTTCCAGTCGTACTTAGACTAATCTCTCCATGTCCTCTTTCTTCCTCTTTCTTCATTCAGGAATGACGGGTCTCTTGTCTCTGTGCTCAAGACTCTACTGTTTTTCACTATTCTGATGATAACTCTACCCATCGGACTGTATTTTACATCAAAGTCCCTTCTCTTTGAAGGTATTTCGCTTTAAAGGCTGATCAGCCATGTATTTACCTAACGTTATTTAAATATTTATAACAACTCTGATGATCTCATTATTATTGGCTCCA
Associated Phenotype:
Not determined