ZMP

col7a1l

Ensembl ID:

ENSDARG00000069692

ZFIN ID:

ZDB-GENE-030131-9861

Description:

Novel protein similar to vertebrate collagen family [Source:UniProtKB/TrEMBL;Acc:Q1LYN6]

Human Orthologues:

COL24A1, COL27A1

Human Descriptions:

collagen, type XXIV, alpha 1 [Source:HGNC Symbol;Acc:20821]
collagen, type XXVII, alpha 1 [Source:HGNC Symbol;Acc:22986]

Mouse Orthologues:

Col24a1, Col27a1

Mouse Descriptions:

collagen, type XXIV, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:1918605]
collagen, type XXVII, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:2672118]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6935	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6935

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000101592	None	None	589	None	14
ENSDART00000141566	Essential Splice Site	1067	1722	22	64

Genomic Location (Zv9):

Chromosome 4 (position 14987750)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	15923603
GRCz11	4	15922358

KASP Assay ID:

554-4626.1 (used for ordering genotyping assays)

KASP Sequence:

ACCCAGAAGCTCTTGCTAAACCAGAAGGACCTTGTCCGCTTAAYTGCAAG[G/A]TAAATGCTTTCTCTGACAAATGTTATCTCGATGTTACTGTATTTTTTCAC

Long Flanking Sequence:

ATGCTTTGGCTCTCCGACTTATATGTTTCAACAAACAACAGAGGTAAACTAAAATTGTATGAATGTATTTTAAAAAGTACACTTACTACTCCATCAGCGTAGACTTCAGTATAAGCAGAAGTGAATGCTAAACATCAGTTTCTGCTACTTGTCTGTTAGGGGTCAGTGTGTTGGTCATCGGCATCGCTCACGCCGACATGGAGGAGGTGAGGACAATCGCGTCTCCCACCACATACAAGAACATCTTCTACGCCAGTGATTTTGACGACCTCCCATCCATCGAGAGAGAGTTCATCGGTAGCATTTGCAGCGAAGCCCTGCAGTCCGAATTTAAACAACACGACGAGGTGAGCCATGCAGATAAAAGAAATTATAGCTATAAATATACCCAACACTAATAATATGTTCATATTTTTGTGTAGTCTGCTCAACTGGACACACCTACAGAAGACCCAGAAGCTCTTGCTAAACCAGAAGGACCTTGTCCGCTTAACTGCAAG[G/A]TAAATGCTTTCTCTGACAAATGTTATCTCGATGTTACTGTATTTTTTCACAGTAAATTACATTAGCATTACTTTACAGGATTTAACTGTGAAATTCACAGTATGTTGTATTCAGAATTGTATTGCGAAATTAAGGCTGGAAGCATAATTATTGTAAAAGGGGCTATAAATTTAGCTGATTTAATCGTTAATTTGTGTTTTATTCAACATAGAAATTAATACACCTCAACTTTTATGCTAGTGCACACAATTTATTTTTATATTTAGATATATTTACAAAATGTAGGATACTGATGTCATGTTTCATGTGAAACCTAATTCCTGGTTTGTTTTCATTCTCAGGGTCAGAAAGGAGAAAAGGTAAGTGGCTGTTGTGGTGCTGTGTTGATATCGATCGTGTTATTATAACTGATGGTATGATTGCATGTATTTTCTCTGCTGCAGGGCGATGGGTTTGGTCATGGAGGCCTGGTATGTTTCTTCATTTCCTTCTGGTTTTCT

Associated Phenotype:

Not determined