ZMP

cldnh

Ensembl ID:

ENSDARG00000069503

ZFIN ID:

ZDB-GENE-010328-8

Description:

claudin-3 [Source:RefSeq peptide;Acc:NP_571842]

Human Orthologue:

CLDN3

Human Description:

claudin 3 [Source:HGNC Symbol;Acc:2045]

Mouse Orthologue:

Cldn3

Mouse Description:

claudin 3 Gene [Source:MGI Symbol;Acc:MGI:1329044]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6673	Nonsense	Mutation detected in F1 DNA	Not yet available
sa43654	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6673

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000101211	Nonsense	103	214	2	2

Genomic Location (Zv9):

Chromosome 21 (position 25120842)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	21	25704179
GRCz11	21	25740784

KASP Assay ID:

554-5174.1 (used for ordering genotyping assays)

KASP Sequence:

ATCATCTTGGCTGTTCTAGGTGTGATGATCTCCGTCATGGGCGCCAAATG[C/A]ACCAATTGTATTGAGGATGAAGGTGCTAAGGCTAAAGTGATGATCGTCTC

Long Flanking Sequence:

TTCACAACACCTTCACAGGCTACACAAAGAAAGGAAAGATTGAGACGGCTTCAACAAAGACATCTCGACACTTGGTAAATGACATTCATTACTCCATTTTGGATTATTTTATGTGATATTATTGCTTTGTTTTGTGTATACGATTACAACTAATGAACTTTTCCATATCTTAGATACAAAAGTACACCTAAAATGTCGATGGGACTGGAAATTGGGGGCATTGCCCTGGGTATTATTGGTTGGATAATTAGCATTGTGGCTTGTGCTCTTCCCATGTGGCGTGTCTCGGCCTTCGTTGGCGCCAACATTGTCACGGCGCAAGTAATGTGGGATGGTTTATGGATGAACTGTGTCGTTCAGAGCACTGGACAGATGCAGTGTAAGGTCTACGACTCAATGCTGGCTTTAGGTCAAGATCTGCAGGCGTCCAGAGCCATGACTGTCATTGCCATCATCTTGGCTGTTCTAGGTGTGATGATCTCCGTCATGGGCGCCAAATG[C/A]ACCAATTGTATTGAGGATGAAGGTGCTAAGGCTAAAGTGATGATCGTCTCTGGCATCATGTTCATTATTGCTGGCATCCTGGATCTCATTCCTTCAGCCTGGGTGGCAAACCAGATCATTCGGGACTTTTACAACCCGTTACTGCCCGGCGCTCAGCAAAGAGAGCTCGGGGCATCCATTTACATAGGTTTCGCTGCTGCCGCTCTCTTAATCATTGGAGGAGCCATGCTGTGCTGCACTTGTCCTCCAAAAGAGAAGAAGTACAAGCCGGCAAGAATGGGCTATTCTGCTCCACGCTCAGCCAGCGCTGGATATGACAAGAAGGACTATGTTTAAATCTGTAGAAGAAGAAAAAAAAAACAAAGACGGATGAAAAGGGTGAACATGCATATGAAAGGACTCCATAATGAAGGGATGTGATGCTGTTAATATTTGCTTTTCGTTGGTTTAAGACTTTGTGTGTGTAAGGGATGATGTCTATCAGGGACTTTTTTGTTTGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa43654

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000101211	Nonsense	137	214	2	2

Genomic Location (Zv9):

Chromosome 21 (position 25120740)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	21	25704077
GRCz11	21	25740682

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGCATCATGTTCATTATTGCTGGCATCCTGGATCTCATTCCTTCAGCCTG[G/A]GTGGCAAACCAGATCATTCGGGACTTTTACAACCCGTTACTGCCCGGCGC

Long Flanking Sequence:

ATTATTTTATGTGATATTATTGCTTTGTTTTGTGTATACGATTACAACTAATGAACTTTTCCATATCTTAGATACAAAAGTACACCTAAAATGTCGATGGGACTGGAAATTGGGGGCATTGCCCTGGGTATTATTGGTTGGATAATTAGCATTGTGGCTTGTGCTCTTCCCATGTGGCGTGTCTCGGCCTTCGTTGGCGCCAACATTGTCACGGCGCAAGTAATGTGGGATGGTTTATGGATGAACTGTGTCGTTCAGAGCACTGGACAGATGCAGTGTAAGGTCTACGACTCAATGCTGGCTTTAGGTCAAGATCTGCAGGCGTCCAGAGCCATGACTGTCATTGCCATCATCTTGGCTGTTCTAGGTGTGATGATCTCCGTCATGGGCGCCAAATGCACCAATTGTATTGAGGATGAAGGTGCTAAGGCTAAAGTGATGATCGTCTCTGGCATCATGTTCATTATTGCTGGCATCCTGGATCTCATTCCTTCAGCCTG[G/A]GTGGCAAACCAGATCATTCGGGACTTTTACAACCCGTTACTGCCCGGCGCTCAGCAAAGAGAGCTCGGGGCATCCATTTACATAGGTTTCGCTGCTGCCGCTCTCTTAATCATTGGAGGAGCCATGCTGTGCTGCACTTGTCCTCCAAAAGAGAAGAAGTACAAGCCGGCAAGAATGGGCTATTCTGCTCCACGCTCAGCCAGCGCTGGATATGACAAGAAGGACTATGTTTAAATCTGTAGAAGAAGAAAAAAAAAACAAAGACGGATGAAAAGGGTGAACATGCATATGAAAGGACTCCATAATGAAGGGATGTGATGCTGTTAATATTTGCTTTTCGTTGGTTTAAGACTTTGTGTGTGTAAGGGATGATGTCTATCAGGGACTTTTTTGTTTGTATTTCCTCTTTGACATCATTTTTAATTTGCCTATTTTTGTTTAGCTGTTTGCTTTGTTTGTGTACATGGTGTCAAAATGTATCATAAATGATTTGTGTATTT

Associated Phenotype:

Not determined