ZMP

sfpq

Ensembl ID:

ENSDARG00000011564

ZFIN ID:

ZDB-GENE-040426-2452

Description:

splicing factor, proline- and glutamine-rich [Source:RefSeq peptide;Acc:NP_998443]

Human Orthologue:

SFPQ

Human Description:

splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774]

Mouse Orthologue:

Sfpq

Mouse Description:

splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) Gene [Sourc

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa17716	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa17716

Status:

Available for shipment
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Availability:

Order Allele From ZIRC
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Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000017359	Essential Splice Site	599	638	9	10

The following transcripts of ENSDARG00000011564 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 19 (position 40993668)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	40446206
GRCz11	19	40033326

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ACCAGGGACTAAGTGGATCAACACAAGGGGGCCTAGCGTCCAACGAAATG[G/A]TAATGTTTTCATGAGTTKAAAGCATGAGTGAATGTGAGCNNGTGTGTGTG

Long Flanking Sequence:

TTATCTAAGTTCAATGAAGCACAACCGTGCAAGAGATTTTTTTAACTACAACTGTTTATAAGGTATGATACTGATTAGAACTTGGAAGTGGCAATGAGGTCTTAATATTCTGAGAAGGTCTTTTAAAAGTCATAAAAAGGTATTGAAATTACCTTTAGGATTCCTGCATATACCCTATAGTAAGCATAAGTTCTTTATCATAAATCTTACTATAAATCAAGCTATATGATTTTAAATTCTAATGTAGCATGGAACAAACAAACAAAAAAACATACACAAACCAGTTTATAGTCTTTGTGAGGTTTGTAAGCCGTTATAAAAATATACATTTGAGGTTGTGCTTTACAGGGTTATTGACACTAATGTTTACCCCTTTTAAAAATTGAATAGATATGTCATTTGGATCACCAAACCAGAAGTTCTCATTGACCGGAATGAGCTTTGATGGACACCAGGGACTAAGTGGATCAACACAAGGGGGCCTAGCGTCCAACGAAATG[G/A]TAATGTTTTCATGAGTTGAAAGCATGAGTGAATGTGAGCGTGTGTGTGTGTGGGGGTCATTTTTGGTCTATATTGTTTGAGGTGACCTGTAGTGGTTTATAAGAAATGAGGGACTTTTCTGTTTGTAAGTGGATGGATTTTTTATAGGCTTGTCAGTGGACAGCGCTTTTATTTACTTCCTTGGGATTTGATTATATTGCCTCCATCTAGTGGTAGATGTTGTTGACCACACTTAAGCTCAGCTTCCTCATTTTTCTTTTTGTTGATTTACTAGTCTGTCTGTACTAAAGCCCAGGTATTTTATACATATGTTTACGACTCCTACTTGTAAGTCCTGTCTAAACGACCAATAAAGACAGGCATTTTGCACTCTGTTTGATGTGTAGTCTTTAATTTTGCAATCTGCCATCAAACACCCAGTGAAACGAAATGAGAAGCAATACCCTATGAAATGCTGTGCTTGTTTTTGTCTTGAAGTACTGTAGTTTTTTACTCTTGCA

Associated Phenotype:

Not determined