Busch Lab

ZMP

si:ch211-198b21.5

Ensembl ID:
ENSDARG00000031678
ZFIN IDs:
ZDB-GENE-030616-13, ZDB-GENE-030616-13, ZDB-GENE-030616-13, ZDB-GENE-040724-3, ZDB-GENE-081104-515
Description:
collagen alpha-2(V) chain [Source:RefSeq peptide;Acc:NP_001139254]
Human Orthologue:
COL5A2
Human Description:
collagen, type V, alpha 2 [Source:HGNC Symbol;Acc:2210]
Mouse Orthologue:
Col5a2
Mouse Description:
collagen, type V, alpha 2 Gene [Source:MGI Symbol;Acc:MGI:88458]

Alleles

There are 14 alleles of this gene:

Allele Name Consequence Status Availability
sa13820 Nonsense Available for shipment Available now
sa34725 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa7208 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa14075 Nonsense Available for shipment Available now
sa7207 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa8629 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa13316 Essential Splice Site Available for shipment Available now
sa16186 Essential Splice Site Available for shipment Available now
sa44710 Nonsense Mutation detected in F1 DNA Not yet available
sa657 Essential Splice Site F2 line generated Not yet available
sa31741 Nonsense Available for shipment Available now
sa11735 Essential Splice Site Available for shipment Available now
sa21557 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa13820
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 Nonsense 74 171 2 7
ENSDART00000041807 Nonsense 161 1575 2 54
ENSDART00000048817 Nonsense 46 1259 1 45
ENSDART00000144744 Nonsense 107 1521 2 54
Genomic Location (Zv9):
Chromosome 9 (position 43746754)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42871924
GRCz11 9 42673711
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTGGAACCATCCTGTGCGATGAGGTACAATGTGATGAGGTGTCGAACTG[T/A]GCAAAGGTAGTGATCCCACCGGGAGAGTGCTGTCCGGTCTGCCAGGGCGA
Long Flanking Sequence:
ATGATTTCTATAAAAACATTATATATATATATATACAGTGAAACAAGCATTGATGTGAATTACATTAAATTAGGAATAAAAAATAAAAAATATTGATCACAATTTCAATCACATGGAAATGTTCTAAAACATTTTATGTATGATTGCACATGTGAGGTTCATGTAATTTTGCAAATTATTACAAAAGTCATCAAGTTTCATACCATTTATATGAAAGATTCTTAAACATTTAAAATGACAGAACAAAGCAAAAGAGCTAACGTCACCACATAATTCTCATTATTAACAGTTTGCCATATAATCTCTCTCTCTGTGTGCATGTGTGAATTATTTACATAGTGTTTTACCTTTTTTCCCTCAGAGGATGAGTTGAGCTGTACAGAGAACGGGCAGGTGTACACAAACAGAGACATCTGGAAACCTGAGCCATGCAGGATCTGTGTTTGTGACAGTGGAACCATCCTGTGCGATGAGGTACAATGTGATGAGGTGTCGAACTG[T/A]GCAAAGGTAGTGATCCCACCGGGAGAGTGCTGTCCGGTCTGCCAGGGCGATGCAGCTGAAGGTGGCAATGGCAGACCAGGTGAGACTGCACCAGAATAAACCTTCAAAACAGATGAAAATTTGGTTTTAATCATCATGTAAATCTGCAGTGGTGTGAATTTTAAGTTTTTGTCTGTTATGTTTCTTCTTGTCAGGAGGCAGAATCGCCAAGGTAAGCTATGTCACAATCAGCACTGTTAACTGTCTCTTATTTCAAAGTACTGTAAATAAGTAAAGAAAAGAAACATTTCTGTTCACTTTTTTTTTTTTTTGCTTTGTTTCTTTATTTCAGGGCCAGAAAGGGGAACCTGGAGTTGTACCACATGTGTGTTAAAATTATTATTTATCTAAATTGTACAAAATATGGATATATAATAATTTTGCATAAATTGTAAAATAATAATTCTGTCTTGATTTCAGATCGTTGGAATAAGAGGTCGTCCTGGACCAATGGTGAGTGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34725
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 357 1575 13 54
ENSDART00000048817 None None 1259 None 45
ENSDART00000144744 Essential Splice Site 303 1521 13 54
Genomic Location (Zv9):
Chromosome 9 (position 43741712)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42866882
GRCz11 9 42668669
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGGTGGTGTTGTTTGAATTTGCATTAATGGCTCACTAACATCTGTGCTC[A/G]GGGAGGAAGAGGATTTCCAGGGACACCGGGGCCCCCAGGCTTAAAGGGCC
Long Flanking Sequence:
ATTCCAACTAAAGCTACTTACTATACTTTCTGTATTGTTTAGAAATTAACAGCACTGTTAGAGCATGGATGAGTTTTGTCATGAAACTGACTAACAGCTGAAATACCCGCATCAATGCTGCTGTTATAATAATTTCCTCTTTCACCTATCTCTTTTCAAAATTGATTCAGGTGGAAATGCACTGTTTTTATTACTAAAAGAGTTTAATGTTTTGTACTGTATAGGGTGGCGCTGGGCAGAGGGGACCAGAGGGTCCTCCGGGAAAGCCTGGTGAAGATGTGAGTACATCATAAACATATACACAATAATGTGGAAAGTTTACATGGGATCTAAAATCTGAAAGTTTTATGTTGTAATAGGGAGAAGCAGGTACTCCAGGAAGTGCAGGAGAAATGGGATTCCCTGGATCTCCGGTAATAACCGTCATTCTTCAACTGCAGCTTTTACTAGTAGGTGGTGTTGTTTGAATTTGCATTAATGGCTCACTAACATCTGTGCTC[A/G]GGGAGGAAGAGGATTTCCAGGGACACCGGGGCCCCCAGGCTTAAAGGGCCACAGAGTGAGTAAATTATTTGACTTTCAGCTTAATTTAAGATTTACATAACATGGGGGTGACACGGTGATTCAGTGGTTAGCACTGTTGACTCATAGCAAGAAGGTCGCAGGTTTGAGTCCCAGCTGGGACTCAAAAAAAAAAAAAAAATTAGAGTAACATGAGAGAGAGCAATTCAATAAAATCCCAGATGAGAGTGGAAAGTTCTGGAAATGTATAAATTTAAAAACACAGAAGCAGCAGAAGAAGAATAAAGTGAACAACAAACAATTGAGTATTATCACAGGTAATCATCACAACAACAATGTGATTTAAACACACTGACCTTGTCTGTTAAATAATGTGCATGTACTACACTCAAAAAATGGCTTTTGTTCAAACTGTGTATTCAAAATGAGTAGAAACAACACAATTCTTAACCCTCTACTGCACGGCATAACCATATGGCAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7208
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 557 1575 22 54
ENSDART00000048817 Essential Splice Site 297 1259 15 45
ENSDART00000144744 Essential Splice Site 503 1521 22 54
Genomic Location (Zv9):
Chromosome 9 (position 43736822)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42861992
GRCz11 9 42663779
KASP Assay ID:
554-4803.1 (used for ordering genotyping assays)
KASP Sequence:
ATTTAGGTGTTGCTGGATTTAAAGGAGAGGCTGGACCTAAAGGAGAACCT[G/A]TAGGTTATGATTTCTAANNNGTGAAAAAGCYAAGAGGTTGGGTTTTTTNNAACA
Long Flanking Sequence:
GTGAAAGATCGAAAACTTCGATCATCAATTATTTATAAATCTTATGCATGCAACTAAACATGATTCTGGAATTTTCAGGGCCCTATGGGCACTGATGGTGGTCCAGGTTCCAAAGGCCCAGTGGTATGTAAAAAAAAAATCACATCAACAAATTTAAAATATATAATCTAGATAAATTAAGTTTGAATATTGTCTTTAACAACATATCATTTTATCCAGGGAGTTCCTGGTCCTCAGGGTCCCGTTGGTCTACTTGGGCCAACTGGCCCACCAGGTCCTCAGGGAAGCACTGGACAGCCTGGGATCAAAGGTCAATTGGTAAGGCTTTCTACATTCACACGGTGGCATATACATTTATATTTTTGATGTAAATGTGTATCTGGAAACTCAAAATGAGATAATAGTAAAAACATACCAAATCATCCTTGTTTGTGTGTTCTGTTTAGGGAGATTTAGGTGTTGCTGGATTTAAAGGAGAGGCTGGACCTAAAGGAGAACCT[G/A]TAGGTTATGATTTCTAAGTGAAAAAGCTAAGAGGTTGGGTTTTTTTAACACAAGAAAAACAAACATTGCCTTTGTGGCTTTTAGGGTCCACCAGGATCACAGGGAGTACTTGGACCTCAGGGAGAGGAGGGAAAACGTGGACCCAGAGGAGATCCTGGTTCTATTGGCCCACCTGGACCTGTTGGTGAGAGAGTGAGTCTAGTTTTACATTTTAATGCCTATGCAACAGCAAAATGACATGTATGAAATAGTGAAAATTACTTCAATTTTCAATGTTTTTTTTTTATTCTCTAATAAAGGGGGCACCTGGAAACAGAGGCTTTCCAGGTCAAGATGGCTTACAGGGTCCAAAGGTAATAAGAGAGTTAAATTAGATACAAACTATTAACTTGCTGAATATGATTACCTGAATACTAAAATTATTTTGTTTCGGATCAAAGGGTGCACAAGGAGACCGTGGAACTTCAGGAACCTCTGGCCCTAAAGGTTCAACTGGTGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14075
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Nonsense 567 1575 23 54
ENSDART00000048817 Nonsense 307 1259 16 45
ENSDART00000144744 Nonsense 513 1521 23 54
Genomic Location (Zv9):
Chromosome 9 (position 43736710)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42861880
GRCz11 9 42663667
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACATTGCCTTTGTGGCTTTTNAGGGTCCACCAGGATCACAGGGAGTACTT[G/T]GACCTCAGGGAGAGGAGGGAAAACRTGGACCCAGAGGAGATYCTGGTTCT
Long Flanking Sequence:
AAGGCCCAGTGGTATGTAAAAAAAAAATCACATCAACAAATTTAAAATATATAATCTAGATAAATTAAGTTTGAATATTGTCTTTAACAACATATCATTTTATCCAGGGAGTTCCTGGTCCTCAGGGTCCCGTTGGTCTACTTGGGCCAACTGGCCCACCAGGTCCTCAGGGAAGCACTGGACAGCCTGGGATCAAAGGTCAATTGGTAAGGCTTTCTACATTCACACGGTGGCATATACATTTATATTTTTGATGTAAATGTGTATCTGGAAACTCAAAATGAGATAATAGTAAAAACATACCAAATCATCCTTGTTTGTGTGTTCTGTTTAGGGAGATTTAGGTGTTGCTGGATTTAAAGGAGAGGCTGGACCTAAAGGAGAACCTGTAGGTTATGATTTCTAAGTGAAAAAGCTAAGAGGTTGGGTTTTTTTAACACAAGAAAAACAAACATTGCCTTTGTGGCTTTTAGGGTCCACCAGGATCACAGGGAGTACTT[G/T]GACCTCAGGGAGAGGAGGGAAAACGTGGACCCAGAGGAGATCCTGGTTCTATTGGCCCACCTGGACCTGTTGGTGAGAGAGTGAGTCTAGTTTTACATTTTAATGCCTATGCAACAGCAAAATGACATGTATGAAATAGTGAAAATTACTTCAATTTTCAATGTTTTTTTTTTATTCTCTAATAAAGGGGGCACCTGGAAACAGAGGCTTTCCAGGTCAAGATGGCTTACAGGGTCCAAAGGTAATAAGAGAGTTAAATTAGATACAAACTATTAACTTGCTGAATATGATTACCTGAATACTAAAATTATTTTGTTTCGGATCAAAGGGTGCACAAGGAGACCGTGGAACTTCAGGAACCTCTGGCCCTAAAGGTTCAACTGGTGATCCAGGAAGAACAGGTGAACCAGGTCTACCAGGAGCAAGAGTAAGTAAAATTGACCATGCCAATGTGCTATTTTGAGTTTAAAATATAGCTCTGGTTATTTTTTTGCATCCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7207
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 645 1575 26 54
ENSDART00000048817 Essential Splice Site 385 1259 19 45
ENSDART00000144744 Essential Splice Site 591 1521 26 54
Genomic Location (Zv9):
Chromosome 9 (position 43736201)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42861371
GRCz11 9 42663158
KASP Assay ID:
554-4262.1 (used for ordering genotyping assays)
KASP Sequence:
TTTGAGTTTAAAATATAGCTCTGGTTATTTTTTTGCATCCTTTGTTTCAC[A/T]GGGTTTGACAGGTACGCCTGGAGTTCAGGGTGCTGAAGGAAAACCAGGAC
Long Flanking Sequence:
GGAGAGGAGGGAAAACGTGGACCCAGAGGAGATCCTGGTTCTATTGGCCCACCTGGACCTGTTGGTGAGAGAGTGAGTCTAGTTTTACATTTTAATGCCTATGCAACAGCAAAATGACATGTATGAAATAGTGAAAATTACTTCAATTTTCAATGTTTTTTTTTTATTCTCTAATAAAGGGGGCACCTGGAAACAGAGGCTTTCCAGGTCAAGATGGCTTACAGGGTCCAAAGGTAATAAGAGAGTTAAATTAGATACAAACTATTAACTTGCTGAATATGATTACCTGAATACTAAAATTATTTTGTTTCGGATCAAAGGGTGCACAAGGAGACCGTGGAACTTCAGGAACCTCTGGCCCTAAAGGTTCAACTGGTGATCCAGGAAGAACAGGTGAACCAGGTCTACCAGGAGCAAGAGTAAGTAAAATTGACCATGCCAATGTGCTATTTTGAGTTTAAAATATAGCTCTGGTTATTTTTTTGCATCCTTTGTTTCAC[A/T]GGGTTTGACAGGTACGCCTGGAGTTCAGGGTGCTGAAGGAAAACCAGGACCATTGGTACGTTTATCTGATGTTTTCCATGCATAATAAAATATCCACACATGTACTGTAACAGGAAAATTAATAAATGTTACTTTTCACATTCTACAGGGTGCTCCAGGTGAGGATGGACGTCCAGGGCCTGCAGGGTCGACAGGAACAAGAGGCCCTATCGGAACTATGGGACCAATAGGACCCAAGGGTTTTAGTGTGAGTGGATTTTGAATATGAAATTTGGAAATTGAACTTAGAAATTGTATTTAGAAATTGTTTTAAAATGTATTGCACATAAAACAGAACAAAACAAACTTAAAATTTTGACAATATTCTAGGGGGATCCAGGAAAGGCAGGTGAGCAGGGATCTGCTGGAGTTCCTGGGCAAAGGGTGAGTAACAGCTATTGAGCTGACAAAAGTATTGATTTGCATTACTCACATTACTAAGACAAACTATCTCAGAACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8629
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 731 1575 29 54
ENSDART00000048817 Essential Splice Site 471 1259 22 45
ENSDART00000144744 Essential Splice Site 677 1521 29 54
Genomic Location (Zv9):
Chromosome 9 (position 43735503)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42860673
GRCz11 9 42662460
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACCTGGCAAAGATGGAGAAGTAGGCCCAGCTGGTCCACCAGGTCCACAT[G/T]TAAGKGTCCCATTCCTACTTATACATTAGTGTGTGTGTNNTGTGATGCTATT
Long Flanking Sequence:
CAAGAGGCCCTATCGGAACTATGGGACCAATAGGACCCAAGGGTTTTAGTGTGAGTGGATTTTGAATATGAAATTTGGAAATTGAACTTAGAAATTGTATTTAGAAATTGTTTTAAAATGTATTGCACATAAAACAGAACAAAACAAACTTAAAATTTTGACAATATTCTAGGGGGATCCAGGAAAGGCAGGTGAGCAGGGATCTGCTGGAGTTCCTGGGCAAAGGGTGAGTAACAGCTATTGAGCTGACAAAAGTATTGATTTGCATTACTCACATTACTAAGACAAACTATCTCAGAACAGCTTAGTAATTAATTGTTGTATCAACAGTATAGCATCTTTAAAGTGTATTATCTTAGTTTTTGAGGTCAAGCTCCACTAACTAAAAATCTAAATATTGTTCTACAAAAAAACAAACTCTATCCTTTAATTTTGACTTTTTATAGGGTCCACCTGGCAAAGATGGAGAAGTAGGCCCAGCTGGTCCACCAGGTCCACAT[G/T]TAAGGGTCCCATTCCTACTTATACATTAGTGTGTGTGTTGTGATGCTATTGCAATTACAATTAGAAAAGGAAATTCAGAGCAACTCTATGAAAACTCTATGTTTTCATTTTTTGATTTTCAGGGTACAGCAGGCGAGCGAGGTGAACAGGGACCTCCTGGAATGCACGGTTTCCAGGTGTGTAGTTTGTGTCTTATGAAAATATTTTCTTTTTATGTTATTAGGTCCTATATAATGTGAATCACCTTACCTGTTTTTTAGGGGTTGCCTGGACCAGCAGGTGCTCCTGGGGAGGGAGGAAAACCTGGTGATCAGGTGTGCAGTTAATTGACTAACTTTAACTAAATAATGAATTTCTAGGAAAATACAATGGAGAAACAGCATAAAACAATGCTAACCAGGAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTAAGGGTATCCCTGGTGAGGGTGGTCCAGTTGGCCAAATTGGACCAAGGGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13316
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 732 1575 30 54
ENSDART00000048817 Essential Splice Site 472 1259 23 45
ENSDART00000144744 Essential Splice Site 678 1521 30 54
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 732 1575 30 54
ENSDART00000048817 Essential Splice Site 472 1259 23 45
ENSDART00000144744 Essential Splice Site 678 1521 30 54
Genomic Location (Zv9):
Chromosome 9 (position 43735382)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42860552
GRCz11 9 42662339
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAATTCAGAGCAACTCTATGAAAACTCTATGTTTTCWTTTTTTGATTTTC[A/T]GGGTACAGCAGGCGAGCGAGGTGAACAGGGACCYCCTGGAATGCACRGTT
Long Flanking Sequence:
ATTGCACATAAAACAGAACAAAACAAACTTAAAATTTTGACAATATTCTAGGGGGATCCAGGAAAGGCAGGTGAGCAGGGATCTGCTGGAGTTCCTGGGCAAAGGGTGAGTAACAGCTATTGAGCTGACAAAAGTATTGATTTGCATTACTCACATTACTAAGACAAACTATCTCAGAACAGCTTAGTAATTAATTGTTGTATCAACAGTATAGCATCTTTAAAGTGTATTATCTTAGTTTTTGAGGTCAAGCTCCACTAACTAAAAATCTAAATATTGTTCTACAAAAAAACAAACTCTATCCTTTAATTTTGACTTTTTATAGGGTCCACCTGGCAAAGATGGAGAAGTAGGCCCAGCTGGTCCACCAGGTCCACATGTAAGGGTCCCATTCCTACTTATACATTAGTGTGTGTGTTGTGATGCTATTGCAATTACAATTAGAAAAGGAAATTCAGAGCAACTCTATGAAAACTCTATGTTTTCATTTTTTGATTTTC[A/T]GGGTACAGCAGGCGAGCGAGGTGAACAGGGACCTCCTGGAATGCACGGTTTCCAGGTGTGTAGTTTGTGTCTTATGAAAATATTTTCTTTTTATGTTATTAGGTCCTATATAATGTGAATCACCTTACCTGTTTTTTAGGGGTTGCCTGGACCAGCAGGTGCTCCTGGGGAGGGAGGAAAACCTGGTGATCAGGTGTGCAGTTAATTGACTAACTTTAACTAAATAATGAATTTCTAGGAAAATACAATGGAGAAACAGCATAAAACAATGCTAACCAGGAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTAAGGGTATCCCTGGTGAGGGTGGTCCAGTTGGCCAAATTGGACCAAGGGTGAGATCTTGTTTTACCTCTGTAAAAACATCTTTGTGGTCATTATCTATCGTTCATGGTAAACTGAATGATTTAACAGGGTGAACGTGGAATCCCTGGAGAGAGAGGAGAGTTGGGACCTGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16186
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 732 1575 30 54
ENSDART00000048817 Essential Splice Site 472 1259 23 45
ENSDART00000144744 Essential Splice Site 678 1521 30 54
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 732 1575 30 54
ENSDART00000048817 Essential Splice Site 472 1259 23 45
ENSDART00000144744 Essential Splice Site 678 1521 30 54
Genomic Location (Zv9):
Chromosome 9 (position 43735382)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42860552
GRCz11 9 42662339
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAATTCAGAGCAACTCTATGAAAACTCTATGTTTTCWTTTTTTGATTTTC[A/T]GGGTACAGCAGGCGAGCGAGGTGAACAGGGACCYCCTGGAATGCACRGTT
Long Flanking Sequence:
ATTGCACATAAAACAGAACAAAACAAACTTAAAATTTTGACAATATTCTAGGGGGATCCAGGAAAGGCAGGTGAGCAGGGATCTGCTGGAGTTCCTGGGCAAAGGGTGAGTAACAGCTATTGAGCTGACAAAAGTATTGATTTGCATTACTCACATTACTAAGACAAACTATCTCAGAACAGCTTAGTAATTAATTGTTGTATCAACAGTATAGCATCTTTAAAGTGTATTATCTTAGTTTTTGAGGTCAAGCTCCACTAACTAAAAATCTAAATATTGTTCTACAAAAAAACAAACTCTATCCTTTAATTTTGACTTTTTATAGGGTCCACCTGGCAAAGATGGAGAAGTAGGCCCAGCTGGTCCACCAGGTCCACATGTAAGGGTCCCATTCCTACTTATACATTAGTGTGTGTGTTGTGATGCTATTGCAATTACAATTAGAAAAGGAAATTCAGAGCAACTCTATGAAAACTCTATGTTTTCATTTTTTGATTTTC[A/T]GGGTACAGCAGGCGAGCGAGGTGAACAGGGACCTCCTGGAATGCACGGTTTCCAGGTGTGTAGTTTGTGTCTTATGAAAATATTTTCTTTTTATGTTATTAGGTCCTATATAATGTGAATCACCTTACCTGTTTTTTAGGGGTTGCCTGGACCAGCAGGTGCTCCTGGGGAGGGAGGAAAACCTGGTGATCAGGTGTGCAGTTAATTGACTAACTTTAACTAAATAATGAATTTCTAGGAAAATACAATGGAGAAACAGCATAAAACAATGCTAACCAGGAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTAAGGGTATCCCTGGTGAGGGTGGTCCAGTTGGCCAAATTGGACCAAGGGTGAGATCTTGTTTTACCTCTGTAAAAACATCTTTGTGGTCATTATCTATCGTTCATGGTAAACTGAATGATTTAACAGGGTGAACGTGGAATCCCTGGAGAGAGAGGAGAGTTGGGACCTGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44710
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Nonsense 740 1575 30 54
ENSDART00000048817 Nonsense 480 1259 23 45
ENSDART00000144744 Nonsense 686 1521 30 54
Genomic Location (Zv9):
Chromosome 9 (position 43735356)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42860526
GRCz11 9 42662313
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTATGTTTTCATTTTTTGATTTTCAGGGTACAGCAGGCGAGCGAGGTGAA[C/T]AGGGACCTCCTGGAATGCACGGTTTCCAGGTGTGTAGTTTGTGTCTTATG
Long Flanking Sequence:
ACTTAAAATTTTGACAATATTCTAGGGGGATCCAGGAAAGGCAGGTGAGCAGGGATCTGCTGGAGTTCCTGGGCAAAGGGTGAGTAACAGCTATTGAGCTGACAAAAGTATTGATTTGCATTACTCACATTACTAAGACAAACTATCTCAGAACAGCTTAGTAATTAATTGTTGTATCAACAGTATAGCATCTTTAAAGTGTATTATCTTAGTTTTTGAGGTCAAGCTCCACTAACTAAAAATCTAAATATTGTTCTACAAAAAAACAAACTCTATCCTTTAATTTTGACTTTTTATAGGGTCCACCTGGCAAAGATGGAGAAGTAGGCCCAGCTGGTCCACCAGGTCCACATGTAAGGGTCCCATTCCTACTTATACATTAGTGTGTGTGTTGTGATGCTATTGCAATTACAATTAGAAAAGGAAATTCAGAGCAACTCTATGAAAACTCTATGTTTTCATTTTTTGATTTTCAGGGTACAGCAGGCGAGCGAGGTGAA[C/T]AGGGACCTCCTGGAATGCACGGTTTCCAGGTGTGTAGTTTGTGTCTTATGAAAATATTTTCTTTTTATGTTATTAGGTCCTATATAATGTGAATCACCTTACCTGTTTTTTAGGGGTTGCCTGGACCAGCAGGTGCTCCTGGGGAGGGAGGAAAACCTGGTGATCAGGTGTGCAGTTAATTGACTAACTTTAACTAAATAATGAATTTCTAGGAAAATACAATGGAGAAACAGCATAAAACAATGCTAACCAGGAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTAAGGGTATCCCTGGTGAGGGTGGTCCAGTTGGCCAAATTGGACCAAGGGTGAGATCTTGTTTTACCTCTGTAAAAACATCTTTGTGGTCATTATCTATCGTTCATGGTAAACTGAATGATTTAACAGGGTGAACGTGGAATCCCTGGAGAGAGAGGAGAGTTGGGACCTGCTGGTCTGCCTGGAGCCAAAGGTATCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa657
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 815 1575 33 54
ENSDART00000048817 None None 1259 None 45
ENSDART00000144744 Essential Splice Site 761 1521 33 54
Genomic Location (Zv9):
Chromosome 9 (position 43734827)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42859997
GRCz11 9 42661784
KASP Assay ID:
554-0565.1 (used for ordering genotyping assays)
KASP Sequence:
TGCCTGGAGCCAAAGGTATCCCAGGAGCACCTGGTCCTGATGGCCCAAAG[G/A]TAGAAAATAAATTAGATAAGATCATATTTGCTATTGATGCTTTTAAAATG
Long Flanking Sequence:
GGTGTGTAGTTTGTGTCTTATGAAAATATTTTCTTTTTATGTTATTAGGTCCTATATAATGTGAATCACCTTACCTGTTTTTTAGGGGTTGCCTGGACCAGCAGGTGCTCCTGGGGAGGGAGGAAAACCTGGTGATCAGGTGTGCAGTTAATTGACTAACTTTAACTAAATAATGAATTTCTAGGAAAATACAATGGAGAAACAGCATAAAACAATGCTAACCAGGAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTAAGGGTATCCCTGGTGAGGGTGGTCCAGTTGGCCAAATTGGACCAAGGGTGAGATCTTGTTTTACCTCTGTAAAAACATCTTTGTGGTCATTATCTATCGTTCATGGTAAACTGAATGATTTAACAGGGTGAACGTGGAATCCCTGGAGAGAGAGGAGAGTTGGGACCTGCTGGTCTGCCTGGAGCCAAAGGTATCCCAGGAGCACCTGGTCCTGATGGCCCAAAG[G/A]TAGAAAATAAATTAGATAAGATCATATTTGCTATTGATGCTTTTAAAATGCTAATTGCTCATTATGCTAATCTTTTTACAGGGCAGCCCTGGACCTACTGGTACATTGGGCAATCAAGGCCCTCCTGGTCTGCAGGGAATGCCAGGTGAAAGAGGGATCTCTGGCCCACCTGGTCCAAAAGGAGACAGAGTGAGTTGTTATGAATTTAGATTTACAGTATGTACACTGACATTTCTATATATTTGAATTAACCTCTTCCTACATTTTTAGGGAGCTATTGGTGAGAAAGGATCAGAAGGCACCCCGGGAAGTGATGGTGCAAGGGTAATTATCAGAAGTATTTTCAGATTTTTAATAAACCTTAATTGGTTCACATAAGGTCATTCTAAAAGTTGCTTTATGAATTAGCTAAAGTATTAATAGCTACTGTATAATTTTAGTAAATTATCTTCAGAAAATAGTTTTAAGCAGAATAATGTTTAATATATTTCTCTCTGTGA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa31741
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Nonsense 1040 1575 42 54
ENSDART00000048817 Nonsense 729 1259 33 45
ENSDART00000144744 Nonsense 986 1521 42 54
Genomic Location (Zv9):
Chromosome 9 (position 43733036)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42858206
GRCz11 9 42659993
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGCCAAGGAGAAAGAGGCCCCCCTGGGCCTGCTGGAGGCCCTGGGGAC[A/T]AAGGAGATTCTGGAGAAGATGGACCACCAGTAAGTGCGCATCAGACATTT
Long Flanking Sequence:
TGATAAAATGTTTCTATAATAAATCAAATGATACTGAATTATCTTAATTAGTATACTGAATTACAAATTAGAAATCTCCTTCTAATATCTGTAACTACAGGGTAAACTTGGTGTTGCTGGACCAAAGGGTGGTAGAGGAACACAGGGGGCACCAGTAAGTGGTTAAATGCATAACAAGGATAATTCCATTTGAATGAAATGCAAATTAACATACCTCAATGTTTAGGGTCCAACCGGGTTTCCTGGATCTGCTGGAAGGGTTGGCCCACCTGGTCCAACAGTAAGTTGCATTGACAACAGTTTCACAATAACAAATAAGATTATATATCAAAAAAAATATTCTTTAAACTCTTAACTGTGTTTTTTAGGGTCCTATTGGTGAACCAGGTCCTCTTGGTCTTCCTGGAAAAGAGGGTCCACCTGGACTTCGAGGAGACCATGGACCTCCAGGACGCCAAGGAGAAAGAGGCCCCCCTGGGCCTGCTGGAGGCCCTGGGGAC[A/T]AAGGAGATTCTGGAGAAGATGGACCACCAGTAAGTGCGCATCAGACATTTCTCAACTGAACTAATAAGTCTAAAAACAAACAAAAATTATCTTTGTTATTTCCATTAGGGACCTGACGGTCCACCCGGTCCTGCAGGAACAACAGGGCAAAGAGGAATTGTAGGCCTTCCTGGTCAAAGAGGAGAGCGTGGAATGGCAGGACTCCCTGGACCTGCAGTTAGTATCCATTAAAAACATTTAAAATTATGAAAAAAGTTCTCAAACAGGTAGTTGTTGTATGCTGAAATACAAGATTACTGATAGGGCAGAATGGTGACTTAGTGGTGAGCATTGTCGCCTCACAGCAAGAAGGTCACTGGTTTGAGTCCAAGCTTGACTACTTGCTGTTTCTAATCTTCTTTATCTCCTTTTTCTCATAAAGGGTCCTCCAGGAAAACAGGGTACATCAGGAGCCCCTGGAGACAAAGGACCACCTGGCCCTGTTGGAGTGCCGGGTGCTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11735
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Essential Splice Site 1085 1575 43 54
ENSDART00000048817 Essential Splice Site 774 1259 34 45
ENSDART00000144744 Essential Splice Site 1031 1521 43 54
Genomic Location (Zv9):
Chromosome 9 (position 43732818)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42857988
GRCz11 9 42659775
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCTGGTCAAAGAGGAGAGYGTGGAATGGCAGGACTCCCTGGACCTGCAG[T/G]TAGTATCCATTAAAAANCATTTAAAATTATGAAAAAAGTTCTCAAACAGGT
Long Flanking Sequence:
ATGTTTAGGGTCCAACCGGGTTTCCTGGATCTGCTGGAAGGGTTGGCCCACCTGGTCCAACAGTAAGTTGCATTGACAACAGTTTCACAATAACAAATAAGATTATATATCAAAAAAAATATTCTTTAAACTCTTAACTGTGTTTTTTAGGGTCCTATTGGTGAACCAGGTCCTCTTGGTCTTCCTGGAAAAGAGGGTCCACCTGGACTTCGAGGAGACCATGGACCTCCAGGACGCCAAGGAGAAAGAGGCCCCCCTGGGCCTGCTGGAGGCCCTGGGGACAAAGGAGATTCTGGAGAAGATGGACCACCAGTAAGTGCGCATCAGACATTTCTCAACTGAACTAATAAGTCTAAAAACAAACAAAAATTATCTTTGTTATTTCCATTAGGGACCTGACGGTCCACCCGGTCCTGCAGGAACAACAGGGCAAAGAGGAATTGTAGGCCTTCCTGGTCAAAGAGGAGAGCGTGGAATGGCAGGACTCCCTGGACCTGCAG[T/G]TAGTATCCATTAAAAACATTTAAAATTATGAAAAAAGTTCTCAAACAGGTAGTTGTTGTATGCTGAAATACAAGATTACTGATAGGGCAGAATGGTGACTTAGTGGTGAGCATTGTCGCCTCACAGCAAGAAGGTCACTGGTTTGAGTCCAAGCTTGACTACTTGCTGTTTCTAATCTTCTTTATCTCCTTTTTCTCATAAAGGGTCCTCCAGGAAAACAGGGTACATCAGGAGCCCCTGGAGACAAAGGACCACCTGGCCCTGTTGGAGTGCCGGGTGCTAATGGACCTCGGGGAGATCCTGGACCTGATGTAAAAAAATCTTAATATAATTGTTCATTAAATTTAACAGCTACTTTACACAATAAAAAGTTGTATATTTAAATGCATTAAAAAAAAAAAACATTTTAATTACCAGGGACCCGCTGGATCTGATGGCCCACCAGGAAAAGAAGGTGTCATAGGAGCCCAGGTGAGGACAAAAAACACTGAATGACCCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21557
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033544 None None 171 None 7
ENSDART00000041807 Nonsense 1213 1575 48 54
ENSDART00000048817 Nonsense 902 1259 39 45
ENSDART00000144744 Nonsense 1159 1521 48 54
Genomic Location (Zv9):
Chromosome 9 (position 43731818)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 42856988
GRCz11 9 42658775
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGACCAAGGGGAGATAAGGGTGATATTGGTGACCATGGGGAAAGAGGA[C/T]AGAAGGGTCATAGAGGATTTGCAGGCTTACAAGGTCTTCCTGGATCACCT
Long Flanking Sequence:
TGTCTATGTCTTCATTTCAGTCTGTTTATGCCAATCTCACAGAGCTGTTTAAAATTTAAAGGGTGATCGAGGAGATCCAGGCCCAGAGGGTGTGCTTGGAACTGTAGGACAGCCTGGGCCCCCTGGTCCTGTTGGTGCAACTGGGGGGGTTGGAAAGAGAGGAGAGCCTGTGCGTCTCATATTTTCCTTAAAATAATCATATAATAAATTAAACACGTAATGGAATGCCATGTCTAAAGGATTCTGACTTACATTTTTCTTGGTGTTGTTCTACAGGGTTCAAAAGGACCCTCTGGCCCTCCAGGTCCAGCTGGAAAACGAGGACTCACAGTAAGAAATCAGCAAAACAACACAATTTAACATATTAAGAATGGCTTACTTGACCGAAAATTTGCAGAAAAAAACAACACAACTACTCCCTCATTTTAAAATGTCTTTTTAAGGGACCACAAGGACCAAGGGGAGATAAGGGTGATATTGGTGACCATGGGGAAAGAGGA[C/T]AGAAGGGTCATAGAGGATTTGCAGGCTTACAAGGTCTTCCTGGATCACCTGTAAGTTTTTAGAGAGATTAAAAAAAAACTTAAAGAGAAACTAAAAGAAAATATTTAAACACAGTCTAAATATTGTGATATATAACACTAACCAATATAAGCATGTCAAATGAATAATTGACAAATTGCCTTTTTTAGGGCACAACTGGAGAACAAGGGGCCACAGGCATTGTTGGTCCAAGTGGACAAAGAGTATGTCTCCAGCTTAATTAGCCTAACCCTAATGCAACTGATTTATTACTAGTCAAAAAGTGACTGACAACATTTAAATAATTTGTCTCACAGGGACCTCCTGGACCTATTGGGCCACCAGGAAAGGAAGGCTACATTGGGCAACCTGGACCAATGGGACCTCCTGGTTCAAGAGGATCTAGTGGGGATATTGGACCAGAGGCAAGTTACTTGTTTCCAAATAGCTCAAATAACATTAAAACTTTGCCCACTCATTTT
Associated Phenotype:
Not determined