ZMP

casd1

Ensembl ID:

ENSDARG00000023900

ZFIN ID:

ZDB-GENE-060503-329

Description:

CAS1 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1LW89]

Human Orthologue:

CASD1

Human Description:

CAS1 domain containing 1 [Source:HGNC Symbol;Acc:16014]

Mouse Orthologue:

Casd1

Mouse Description:

CAS1 domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2384865]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa23580	Nonsense	Available for shipment	Available now
sa6566	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa23580

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000049842	None	None	781	None	18
ENSDART00000138555	Nonsense	186	806	4	17

Genomic Location (Zv9):

Chromosome 19 (position 41973620)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	41425874
GRCz11	19	41012994

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATCCCTTTTGTCGATGGTGATTCCACTGTGGTAAGTGATTTTAATTTGTG[G/A]TTTCTTAAAGTTTGAGCAAATGTTGATTTTATTTAGATCCTTTTAATTAT

Long Flanking Sequence:

GCACCTTTGGGATGTGGTGGAACTAGAGATTCGCATCATGGATGTGCAGCCGACAAATCTGCAGCAACTGTGTGATGCTATCATGTCAATATGGAATCTCTGAGGAATATTTTCAGTATCTTGATAAATCTATGCCACTAAGGATTAAGACACTTCGGAAGGCAAAAGTGGTTCCAACCCGGTACTAGTAAGGTGTACCTAATAAAGTGGCCAGTGAGTGTATATTGCAGAAATGAAATATTGCAATGTTAGATTTTTGCAATATCGTGCAGCCTCCTATAAGTGAAGAATGAGTAAATGATGACAACTTTCATTTTTGGATGAACTATCCCTTTAATGCTAAGCTTTTATTTTTTTAAACCATTAATAATAATTATTATCAATTATTGTTGATGGTTTAATAATATATCGCCCTTTTGTTTGCATAAATTATGTCATCAGCATGAGAACATCCCTTTTGTCGATGGTGATTCCACTGTGGTAAGTGATTTTAATTTGTG[G/A]TTTCTTAAAGTTTGAGCAAATGTTGATTTTATTTAGATCCTTTTAATTATTTTTTTTAATGACAGATCAAAATAAGTTGCGAATGTCTCCATTTCAGAATTTCCTGTGGTACGCAGAAGTGAACAATTCCTTGAAGGAGCAGTTAATGTTATGGACTGAGGTAAAGACAATCATATTATTGTACAGCATGCAAAAGAGCCAAGTTATAATATCACGGGCTTCTGATTTTATCTCCTCTCTCAATAACTCTAGGGATCTGCTTCCAAACCACATGTCATCATCATTGGTGCTGCTACGGTGAGTTCTTGTTTGCAGTCATAATGCCTAGAGGCGCTATTGTTGAAGATCTTTTTAATGACTGATGTGTATGGTTTCCAACAGTGGTCCATTAAGTTGCACAACGGCAAGAGTGAGGCGCTTTTTCAGTACAAGGCAAACCTCACAGCTATAGCAGACACACTGGAAAAACTAGCCGAGCACAGTGAAGTCTACTGGGTTCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa6566

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000049842	Essential Splice Site	413	781	9	18
ENSDART00000138555	Essential Splice Site	472	806	9	17

Genomic Location (Zv9):

Chromosome 19 (position 41978295)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	41430549
GRCz11	19	41017669

KASP Assay ID:

554-4717.1 (used for ordering genotyping assays)

KASP Sequence:

CATCTAYATCTTCGTTCTGGGTGTCTTCTACAGTGAGAACAGCAAAGAGG[T/C]ACTGCAAATTTTARCCTGTATTTATASTCTCAAGTAGGGCTGYACAAAAT

Long Flanking Sequence:

CATATATATGACTGTCAACATGGTAAAAAAATGTGTTACGTGACCCTTTTAAATTAACATTTTTTTTATTTCTCCACTTTGTCAGGGCGCCATGGTACTTATGAACTCCATGTGCAACAAGATCCTGAAGCCCATTGATGGCTCCTGCTGTCAGAGCGCTCCTCCGCTAAGCGTCCTTCAGAAGCTAGCAGCTGCTGTCCTCCTGGTGTCCGTCGTCTGCTTCGTCCTGCTGGGCTTCAGCTCACATCGGAAGAGCAGACCCGCTCCTGATGTGGAGAGCGGAGAGGAGAAAAAACACCCCGCTGCTGTGGGGCAGCTCAACCCAAAGGGACCATTACTGGCCATCGGCAAGATGAGCCTCATCATGCTGTACTTCTACCTGTGTGACCGGGCTGACATCTTTATGAAGGAGCAGAAATTCTACACACACTCCGCTTTTTTCATTCCTCTCATCTACATCTTCGTTCTGGGTGTCTTCTACAGTGAGAACAGCAAAGAGG[T/C]ACTGCAAATTTTAACCTGTATTTATAGTCTCAAGTAGGGCTGTACAAAATATTGCTTCAGCATTGATATTGCAATGTGTGCATCTGCAATAGTCACATCACAGGATCTGTGATGTTGAGATGGGTTTATGTAGTTGACCAGGGGTCCGTTCTTCATACCTCGCTTAAATGATCTAAGATGATTTGGCAGATTCTGGATCTTTTAATCTTGATAACTGATCTCTCGCTAATTTGGTTCTTCAAACAAGTTCGCGAATCAGATTAGAATGTCTGGATAAACTGATCTGAGATCGCTGCGTGTGTTGTTAAGGACAGATCTATCGATCCTCGAAATCATGATCAGCAATGCAACGATTGGCTGACGGCACAGCAGCGTAATGACATCATCTGATTAATATTCAATTATCCATGTGAGCAAAATTACATCAAATTAGCAGTAAACGGCTTGTTAAATATGACACGCAATAAGCTGCAGGCTTTACACTTTCATTTGTCAAGACA

Associated Phenotype:

Not determined