ZMP

si:ch73-353p21.4

Ensembl ID:

ZFIN ID:

Human Orthologues:

ERCC6, PGBD1, PGBD2, PGBD3, PGBD4

Human Descriptions:

excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:HGNC S
piggyBac transposable element derived 1 [Source:HGNC Symbol;Acc:19398]
piggyBac transposable element derived 2 [Source:HGNC Symbol;Acc:19399]
piggyBac transposable element derived 3 [Source:HGNC Symbol;Acc:19400]
piggyBac transposable element derived 4 [Source:HGNC Symbol;Acc:19401]

Mouse Orthologue:

Pgbd1

Mouse Description:

piggyBac transposable element derived 1 Gene [Source:MGI Symbol;Acc:MGI:2441675]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa649	Nonsense	F2 line generated	Not yet available

Mutation Details

Allele Name:

sa649

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110526	None	None	468	None	4
ENSDART00000140905	Nonsense	614	626	3	3

Genomic Location (Zv9):

Chromosome 22 (position 5644251)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	5690318
GRCz11	22	5720164

KASP Assay ID:

554-0557.1 (used for ordering genotyping assays)

KASP Sequence:

TTGCATTGTGCCTTGTTTCAAATCGCAACTGTTACGTTAAGTGGCATGAA[C/T]AAGATAGTGATAGCGAGGAGGANNNTGACGATGATGACGASTGAAGCTCCAAC

Long Flanking Sequence:

CAACAAGTAAGTTTATTTTCAGTGTTAAATCATCTTGTCCTTTATTCGCTAAACTGTACATCTGATACATTTCTTTTCATTACAGATACAAGGGAGGAGAGGATGTGTCTAATGCACTAATCGGGTATTACACCGTTTTTCGTCAAACAAAGAAGTGGTATCGGTCCTTTTTCTACCACTTTGTCGACATCGCCATAGTCAATGCCTTCATTCTGCACCAGCAGATGGCCAAGTCGAAGAACCAGAAGGCCATGACCCAGAAGGCCTTTCGTGAAACACTTATTACAGAGCTTACAGGAATAGGGTCTGCCTCAACCTCTACCCCTAAGGCTCCTGTTCCTACCACTGGCCTCCACCTGCCCAGGTACATCAGTGGGGACAGCACAGTAGGAAGGCGGAAATGCAAACTGTGTCAACTTAAAACACCAATGATCTGTGCAACTTGTGATGTTGCATTGTGCCTTGTTTCAAATCGCAACTGTTACGTTAAGTGGCATGAA[C/T]AAGATAGTGATAGCGAGGAGGATGACGATGATGACGACTGAAGCTCCAACATTTTTCCAATTCGTTGATCCTAGGGGAAAAAAGTCATGCACAGAAAGCTTGCAAGCAAGTCTAATGTGGTTTCTCAACCACGTTCCTGGAAGACCAGCAACACTGCATGTTTTTACTGTCTCCTTTGTCTTTCAGTTTCAGATAATGAGCTGATGATCTGAATCAGGTGTGTTTGTTTAAGGAGATACATGGGGCTTACACATTTGTTATGAGTCTGTTACAGGACAAACTGCAAAACGATTCAAAGTTGAATCTCATGCAGTGACATTCAAGTCGAAAAGGAAGTATTCTGTCAATTTAATTGATCCTGAATATAGATTGGCCGTACGTCAGAGGTATAGACACGCATACCAAACAACATTATGGGTAAATGTCCGTGCCCCTCACCAAGCTTTGAAACCAGCATACAACCCACGTCTCATAGACATCTAAACGTAGACAGCTTGGCT

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461