ZMP
sec23a
Ensembl ID:
ZFIN ID:
Description:
Protein transport protein Sec23A [Source:UniProtKB/Swiss-Prot;Acc:Q7SZE5]
Human Orthologue:
SEC23A
Human Description:
Sec23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:10701]
Mouse Orthologue:
Sec23a
Mouse Description:
SEC23A (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1349635]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6460 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa6460
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000003246 | Nonsense | 98 | 765 | 4 | 21 |
| ENSDART00000145617 | Nonsense | 98 | 765 | 4 | 20 |
Genomic Location (Zv9):
Chromosome 17 (position 10505810)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 9939514 |
| GRCz11 | 17 | 10095548 |
KASP Assay ID:
554-4554.1 (used for ordering genotyping assays)
KASP Sequence:
TTAATATTGTTAAACAATATCCCTGTGCTTTTATAGTTCCCACCAACCTA[T/A]GCTGGRATATCTGAAGKCAACCAGCCTGCTGAGCTACTTCCACAGTTTTC
Long Flanking Sequence:
TTGATTCCCGTCTTGCGGTCCTATGCTGATCCTTCCCCTCTCTCTGCTTTCCTGTCAATACACTCTACTATCCTATCCATTAAAGGTAAAAATTCAGAAAAAAATTATTAATATATATATATAAAATATAATATATATATATATATATATATATATATAAATGTCTTTTAAAAAAAATCAAAAACTGCTTTTATTCCAGCCGAAATAAAACTAATAAGAATTTCTCCAGAAGAAAAAAACATTATCAGACCTTCTCTGAAAATTTCCTTGCTCTGTTAAACATCATTTGCAGAATATTTAAAAAAGACAAAAAAAATCAAAGGGGGGTATAACTGTATGTTGTTTTAAATAATAAAATTTAAATAGACTTTCGGATGTTTTCCATGCATAAGTAAGGTTTTTACAGCCTTAAAAAAAGTGCATTGCATTTTTAAAGCTTTTTTTTTTGTATTAATATTGTTAAACAATATCCCTGTGCTTTTATAGTTCCCACCAACCTA[T/A]GCTGGAATATCTGAAGTCAACCAGCCTGCTGAGCTACTTCCACAGTTTTCAACTATTGAATATGTTGTCCAGGTAAAGCTATTAATTACACCTTTTCAAGGTATATAAAAAGTGAACAATAGAATTGGATAAACCATTGTATGGTCCTAAATATGGATCTAATGTGGTATATAAACATACCAAACAGCTATTAGAAATATATTAGAAATTAATAAATTATAATAGTTTACTTATCGAATTGATCTCACGTCTCAAATGTATAATATTTTTATTAACATGAAAGTTTAACGTCTGTTTTAGCTAATGTTATAATGCTTTCTGCAATTATATTTAAACTTTGATTGAATGATTGTGTTGCTATTGAATAGCGTGGTCCACAAATGCCCCTAAACTTCCTGTATGTGGTGGACACGTGCATGGAAGATGATGATCTGCAGGCGCTGAAAGAGTCCCTTCAGATGTCGCTCAGTCTGCTGCCCCCTACTGCCCTAGTGGGCCTC
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Entity | Quality | Tag |
|---|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
cranium ZFA:0000737 |
malformed PATO:0000646 |
abnormal PATO:0000460 |
|
| Larval:Day 5 ZFS:0000037 |
pectoral fin ZFA:0001161 |
malformed PATO:0000646 |
abnormal PATO:0000460 |
|
| Larval:Day 5 ZFS:0000037 |
swim bladder ZFA:0000076 |
aplastic PATO:0001483 |
abnormal PATO:0000460 |
|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
anterior/posterior axis BSPO:0000013 |
decreased length PATO:0000574 |
abnormal PATO:0000460 |
| Larval:Day 5 ZFS:0000037 |
yolk ZFA:0000084 |
quality PATO:0000001 |
abnormal PATO:0000460 |