ZMP
PTPN6 (2 of 2)
Ensembl ID:
Description:
protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:9658]
Human Orthologue:
PTPN6
Human Description:
protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:9658]
Mouse Orthologue:
Ptpn6
Mouse Description:
protein tyrosine phosphatase, non-receptor type 6 Gene [Source:MGI Symbol;Acc:MGI:96055]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6438 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa6438
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000126617 | Essential Splice Site | 109 | 265 | 3 | 6 |
Genomic Location (Zv9):
Chromosome 16 (position 33973296)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 31795780 |
| GRCz11 | 16 | 31751368 |
KASP Assay ID:
554-4840.1 (used for ordering genotyping assays)
KASP Sequence:
TTATTGAGCTCAAATACCCYTTAAACTGTTCCGATCCCACCACAGAGAGG[T/A]AAGCAATCATATCTGACCCTCAWTCAGGACATTTCCAGGTGTGTTTGCCA
Long Flanking Sequence:
TTTTATCCTGAATTTCTTTTTGAAAACACTTTGGTGAAAAGCATGATTGATATGGGTAATCAATATCTATGACAGCAAAAAAAATAGCTGCAATGCTTTGCAAAAAAGTCTTCTTCTCAGGTAATTACTACATACTCACATAACATTTCTACACACTAACTTTCTGTTTCTCAATTTCCTTTGACATTGCATTCTGATGCTGATAGATTTTGTTCTGATTAGTCTATGTTTAGCGATTTTTCCGATGATAAAGTAGAAATACTTATTTTACATCATCAACTGTCTTCTCTTTTTTTTTCTCCAGAGTTGGGGAGATCATCACCCACATTAGGATTCAAAACACAGGGGATTATTATGACCTGTATGGTGGGGAGAAGTTTGCCACATTGGCAGAGTTAGTGGAGTACTACACTGGAGATCATGGAACCCTACAGGATAAAGATGGGACTGTTATTGAGCTCAAATACCCTTTAAACTGTTCCGATCCCACCACAGAGAGG[T/A]AAGCAATCATATCTGACCCTCATTCAGGACATTTCCAGGTGTGTTTGCCAAGTTAAACAAGAAATAGCTCAAATTAGCCATTTTATTTGACCTTTGGCTTTGGGAGATTCTGATATTCCGCATACTGACCTTCAGGATGAGTTTTATCTGCATTTTACCAATGTACTTAGTGTTTTATGAAATGTGACATTTGCTAACCTTGTCTATGCAAAGTCCAGACTCCCATCATACCATTTAAAATATTATGGTTATGATGTTTACATAGGTTAATCATGGAATCATTCCATTTAAATTTTCACATTTACAATACAACCGAGCAAGCATTTTTTTGTGCGTTTAATAAATGTCTAATAGACATCTTGACTAAAACAAGGTTAAATTTGAGCTGTCAGTGAATATCTAGTAGAGATATAACGATAGTCTTAAATATTGTATCTTGGAACTATTGTTAGATATTTATTAGATTTTTTTCTAAAAAGCCTATGTCTATTATTAACAAA
Associated Phenotype:
Not determined