ZMP

LOC568980

Ensembl ID:

ENSDARG00000079931

Human Orthologue:

SNX19

Human Description:

sorting nexin 19 [Source:HGNC Symbol;Acc:21532]

Mouse Orthologue:

Snx19

Mouse Description:

sorting nexin 19 Gene [Source:MGI Symbol;Acc:MGI:1921581]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa2818	Nonsense	F2 line generated	Not yet available
sa6369	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa2818

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000112024	Nonsense	46	956	1	11

Genomic Location (Zv9):

Chromosome 15 (position 16462621)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	17507584
GRCz11	15	17443606

KASP Assay ID:

554-3225.1 (used for ordering genotyping assays)

KASP Sequence:

TTGGCCTGGATGGTCTTGTTCCACCTTCTGGTCAACGTTTGGCTCCTCTG[T/A]GTTTTCACAAGCCTCTTAGTGGTCTTAGGTGGTTGGCTGGGTTCTCAGGC

Long Flanking Sequence:

TGGGAAACAACACTCTCATTCACACACATACACTATGGACAATATTGAAAATGTGTTTAATATTTCATTAATATTTTTGGTGTATATTTCTAAATAGAAAACATTTCCCCTGAAGTTCTAAGTTATCAATACCAATAATTATCTCAAACTTGTACTCTTTTACTGGCAGGGTTGGGATGTATACTACTGGTCACAAAAATTAAGAAAAACACCCCCTGAACTTTGCTGTCTTTGTATTGGGGCCTTAAGCATAAAAGAAAAGTTAACTTTGTGATCAATGCATTAGGGCTTTTATGTTTCCGGGTTTTAAAATAATTGCTCTGCTTCATAATTTTCATTGACAGGAGAATGTAAACATCTGCAATGTCTCAGCCTGAGCATCTCAATGCAAGTCCCTGGGGCTTGTCTGAGTTATTGGTCCAGAAGAGGCTGCTTGGTTTTGGGGCGCTGTTGGCCTGGATGGTCTTGTTCCACCTTCTGGTCAACGTTTGGCTCCTCTG[T/A]GTTTTCACAAGCCTCTTAGTGGTCTTAGGTGGTTGGCTGGGTTCTCAGGCTGTCCTAGTCTCAGACAGTGTTGTTCATCTGGAGCGCTTTATTAAGCTGGAGGAGATCCAAGATAGTGCTGAGAGTGAACAACAATTGGAAGATGAAATCCAAAAGACAGTCGATAAAATCGTACGCGACTTTGTCACATCATGGTACAGTACTGTTTCCGATGAGCAAGAGTTTGAGGATGAGGTTCACAATGCCATGATCTCTATGGCCATGGAGCTGAAGGGTCGAGCATCAAGGGTTGACAGGAAAACTTTGTCCCAGAGGGTGCTTGATCTCTCTGGATGCCATCTTCAGGGCTTCTTGAGTGCCAGTGGAAAACAAGAGGTTGACAAAGATGGAGATCTCTGGGGGACATACAGCAAACTCTGTCCTCCTCATCCCGCTCTTCAGAGCGCTGCTGTCGAAGTAAACTATGTACGGGCCATTGTAGATCTCCTTCTACATGTTCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa6369

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000112024	Nonsense	381	956	1	11

Genomic Location (Zv9):

Chromosome 15 (position 16463625)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	17508588
GRCz11	15	17444610

KASP Assay ID:

554-4757.1 (used for ordering genotyping assays)

KASP Sequence:

AACCGACTCYGATTTGGAATCTCCTCTGACGGACTTCAAGCGGGGCTCCK[T/A]GGAATCATTGRTTCTAATTGGYACAGAGGAAACCCTTTCAGAAAGACTCA

Long Flanking Sequence:

ACCTCCTCCACATTTAGAAACACGAACAGGTCGATTTGTGGTGGGCGAACTTATAACATGCAATGTTATTCTGCCTTTAATTGCAAAACTATCTGATCCAGATTGGCTAAATCTTTTAATTGTAAGCATTTTCACCCAATCCAGTGAACCTGGTTCAGAACCAGAACCAGTAGAAATTCAATCTCCACCACAGGTTGTATCTGCTCAAGAAAATGCACAGCAAGAACTTGCGGTTCCTTGCGTTCTGACCCTAAAAGTTACCCCAGACACACCCAACATAACAGAGGCCTCAACGCCAGAACTTGCGGCTTATGATGTCATTGATTCCGCAGAACTTTTTTCTCCACACAACCTGGAAGAAGATGAATCTCGGACAACCAAACCATTCCCGTTGGGTTTTAGTCCCAGGGATTACCTGCGACTAAGCAAGCCAAATCCATTCTACCAAGAAACCGACTCCGATTTGGAATCTCCTCTGACGGACTTCAAGCGGGGCTCCT[T/A]GGAATCATTGGTTCTAATTGGTACAGAGGAAACCCTTTCAGAAAGACTCACCGAATGCGTCACTCCAGTTGACCCTTTGTTAGACCTTGAGGATGACCTTCCAACTTACACCAATACAGCAGAGAAGGAGCCATCAGCAGCACATTCTGCCAGTGTCCCAGAGGAAGAGGCATCAAGTTTTTGTACTCTCCAGCCATCGGAGAAGTGCAACTCGAGTATAGACCAGCCAGGCCTGTTAAATCCTGGTGACCTGGCTTTGAATACACCCATCCAGGTCACTTCACCAGGTGGGATGGCGTCTCTGGCACCTTTCAACTTTGAGCCCCTCAGTAGTCCAGAGGGTCCGGTTATTATCCAGAACCTCCGCATCACTGGTACCATCACTGCCAAGGAACACAGAGGCACTGGATCCCATCCCTACACTCTCTACACTGTAAAGGTGAAATATGTGTCTTTTTTTCCTGAAGAGTAAAGTAAAAAAAACTTGGGTATGCCATAAA

Associated Phenotype:

Not determined