ZMP
LOC565621
Ensembl ID:
Human Orthologue:
CLP1
Human Description:
CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc
Mouse Orthologue:
Clp1
Mouse Description:
CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) Gene [Source:MGI Symbol
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6358 | Essential Splice Site | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa6358
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000093232 | Essential Splice Site | 214 | 443 | 4 | 6 |
Genomic Location (Zv9):
Chromosome 14 (position 51248393)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 50001109 |
| GRCz11 | 14 | 48988866 |
KASP Assay ID:
554-5184.1 (used for ordering genotyping assays)
KASP Sequence:
TCATTTTGGCTCCACYACTCCAGGRACAAACATCAAACTTTACAACAAGG[T/A]AATAATGACACCGRTGCACTTAAGGGAGTGTTGTTTTTACACATCAGCTT
Long Flanking Sequence:
AATGCAGAGATTTTTTTCCAACACATTTCTAAACATAATGTTTCTAATAACTGATTTATTTTATCTATGCCATGATGACAGCACGTAATATTTGACTAGATGTTTTTTTCAAGATGTTAGTATTCAGCTTAAAGTGACATTTAAAGGCTTAACTAGGTTAATTAGACAGGTTAGAGTTATTAGGCAAGTCATTGTGTAACGTTGCTAATAATATTGACCTTAAAATGAATATAAAAACAATTATTCTAGTCGAAATAAAACAAATAAGACTTTCTCCAGAAGAAAAAATATTATAGGAAATACTGTGAAAAATTCCTCGCTCTGTTAAACATCATTTGGGATTAATTGTTTTGGCCTGCAGGTCTCAGTGCCTGGAACCATGTCGGCTCTGTGCATCGAGCGTCCTGCTGATGTTGAAGAAGGTTTCTCAGTTCAGGCGCCGCTCGTCTTTCATTTTGGCTCCACCACTCCAGGGACAAACATCAAACTTTACAACAAGG[T/A]AATAATGACACCGGTGCACTTAAGGGAGTGTTGTTTTTACACATCAGCTTTGGCTTGTATATCACTGGAACAGATGCAGCTGATTTAATGAGCAGCAAACAATGCTGGGGTTGTATAATCAATAATGAACAAGAGAAGATGCATCAATCTTTCTCCTAATGCAACTATATAATGTGGTTTATATAGAAATATCGGTAACACTTTACAATAAGGTTGTATTAGTTTGTTAGTTAATGCATTTACTAACATGAACAAACAATGAGCAACACGTTTATTACAGTATTTGTTTATGTTAGTTAAAGAATATAAAGTTATTCATGTTAACTCCCGATGCATTAACTAATGTTAACAAGCATGAATCTGGTTATAATGCATTAGTAAATGTTGAAGTATGATGAATAAATTGTTCATAAGTAGGTTATGTTAGAAAAAATACATTAACTAATGAAATGCATTCAAACCCAGGCGATTTTGCAAGTCATGAAAGAAAAGTGAAATGA
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 4 ZFS:0000036 |
brain ZFA:0000008 |
necrotic PATO:0000647 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
eye ZFA:0000107 |
degenerate PATO:0000639 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
head ZFA:0001114 |
decreased size PATO:0000587 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
pericardium ZFA:0000054 |
edematous PATO:0001450 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
trunk ZFA:0001115 |
curved dorsal PATO:0001468 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
trunk ZFA:0001115 |
decreased thickness PATO:0000592 |
abnormal PATO:0000460 |