ZMP

cox16

Ensembl ID:

ENSDARG00000039136

ZFIN ID:

ZDB-GENE-050417-60

Description:

COX16 cytochrome c oxidase assembly homolog [Source:RefSeq peptide;Acc:NP_001017594]

Human Orthologue:

COX16

Human Description:

COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20213]

Mouse Orthologue:

AC132391.1

Mouse Description:

Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6323	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa35554	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6323

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000057164	Essential Splice Site	47	107	2	4

Genomic Location (Zv9):

Chromosome 13 (position 36720459)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	36193028
GRCz11	13	36318860

KASP Assay ID:

554-4486.1 (used for ordering genotyping assays)

KASP Sequence:

TGAGAGAATTCACTCAGATTAGATATGATGCTCAGAAGATCCAAAGAAAG[G/A]TAAGTGAAAGTATTGAGGTAAAGTTGATTTAATATTCGTTAGTTTTNGAT

Long Flanking Sequence:

TTATTACTAATCTTTTTTTTATTTATTACTCAACTTTTTAACGATTTTTAAAAGTGGAACCCATTAGCCTCTCTTCAGTCCCACACGGACGTATTATGCGGCTGTACAAGGGATTGTGGGTTTACATGGCGGCGCCCTGTAGAGAGATGTTTAGTTATGTCCTACTGACTTTACTATAAAATATGTGTAATTGTAGCATGACGTAGATGAACTAAACATGTGGAATCAAGTTCGTAAGCTGCAAAATAACCGGACAGTAAAATACGGGGTCCCGATGCTGGTAAGTGTCTTGACTGTACTGAAATATATTTATTTTAAACTCTTCCAACAATGTTAAACGCTATTGTATAGTTTCTGTTTTTGTGAAATCAACCAGTAATGTATCTGCTCATATGTCTTGTTTGTATGATGTTTGTCTGAAGCTGCTGATCGTGGGAGGCTCGTTTGGTTTGAGAGAATTCACTCAGATTAGATATGATGCTCAGAAGATCCAAAGAAAG[G/A]TAAGTGAAAGTATTGAGGTAAAGTTGATTTAATATTCGTTAGTTTTTGATGATTTGTGACTTGGTGCTTTGAACATTCGGTCTTAAATAGCATGTAAGGAACAATGTGGTACTTTGATAGTGATTGGCCGCTAATATGATTTCCCTTTTTAGAATTTGCAAAGAATTATTTTCTGAAATTATATTAAGAAGGTAAAAGTCTAAATGTTGGAATAAAAAAATCTATTTTACATCAATATTGAAAGCTAGAGTCACCGGCCACTTTATTAGATACACCTTACTTACAAGTACCGTGTTGGACCCCCCTTTGCCTTCAGAACTGCCTTAATCTTTCATGGCAAAGATTCAACAAAGCACTGTAAAATATTCCTCAAAAAATTTTGGTCCATATTGACATAATGGCATCTTACAATTGCTCCAGATTAGTCGGCTCCACATTCATGATGTGAATCTCCTATTTTACCACATTCCAAAGTTGCTCTATTGGATTGAGAATTGGTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35554

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000057164	Essential Splice Site	48	107	3	4

Genomic Location (Zv9):

Chromosome 13 (position 36718958)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	36191527
GRCz11	13	36317359

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTAAATATTTTTTTCTTTTTATCCTTTGGTTGATTTTGGTGTTAAATTTA[G/T]CTGGACCCGGCACTGGAAGCCAGAGTGAAGAGTCAGAAACAGTCTGTCAT

Long Flanking Sequence:

TTGTAACGAGTTGTTATTTGAGTCACTGTTGCCTTTCTATCAGCCAGTCTGGCCATTCTCCTCTGGCAGTAACAAGGCATTTGCACCCACAGAGCTGCCACCCTCTGGATATTTTCTCCTTTTGGACCACACTCTGTAAAGCTTAGAGATGGTTGTGCATGGAAATCCCAGTCGATTAGCATATTTTTAAATACTCAGACCAGCCCATCTGGCACCAACAACCATGCCACATTCAAAACCACTTAAATCACCTTTCTTCTCCATTCTGATGCTCGGTTTAAACTGCAGCAGATCGTCTTGACCATGTCTGCATGCCTAAACGCATTGAGTTGCTGCCATGTGATTGGCTGATTAGAAATATGCATTAATCAGCAGTTGGACAGGTGTACCTAATAAAGTGGCCGGTGAGTATAGAAAAAAAACCTATAATAAAATTTTATTGTTCTTAACGTAAATATTTTTTTCTTTTTATCCTTTGGTTGATTTTGGTGTTAAATTTA[G/T]CTGGACCCGGCACTGGAAGCCAGAGTGAAGAGTCAGAAACAGTCTGTCATCCTTCAGGAGGAATATGAGGTAATGAGAGAGAAAGACACCCTATGAAGTATTTCTAAAACTGAAACTTTTAGCTGGCTGTAAATGTTATAAGTGTCTTTTATATGATTAAAAAATAGAGTTCCTTGTGAAACTAGTTCAGATCTGGCTAAAAATACTAAAACCATAAGCTGATTGCATTATATGTGAGTGAGGCCCTTCCAGCTGCAACCCAGTACTGAGAAACATCTATACACACTTGTTCACACACATACACTACAGCCTATTTAGTTCATTCAATTCACCTATAGCGCTAGTCTTTGTACTGTGGGGGAAAACGAAGCACCCGGAGGAAACCCACGCCAACACGGGGAGAACATGCAAACTCCTCACAGAAATGCCAACTGGCCCAGGCGGGACTCAAACCAGCGACCTTCTTGCTGTGAGGCGACAATGCTAACCACTGAGCCACC

Associated Phenotype:

Not determined