ZMP
vasa
Ensembl ID:
Description:
probable ATP-dependent RNA helicase DDX4 [Source:RefSeq peptide;Acc:NP_571132]
Human Orthologue:
DDX4
Human Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 [Source:HGNC Symbol;Acc:18700]
Mouse Orthologue:
Ddx4
Mouse Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 Gene [Source:MGI Symbol;Acc:MGI:102670]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa15900 | Essential Splice Site | Available for shipment | Available now |
sa6158 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa18973 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa9472 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15900
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000105384 | Essential Splice Site | 65 | 700 | 6 | 26 |
ENSDART00000121729 | Essential Splice Site | 82 | 715 | 6 | 26 |
ENSDART00000125262 | Essential Splice Site | 65 | 688 | 6 | 25 |
ENSDART00000128866 | Essential Splice Site | 81 | 716 | 7 | 27 |
Genomic Location (Zv9):
Chromosome 10 (position 6557550)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 6934178 |
GRCz11 | 10 | 6892878 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGG[T/C]GAAATTTATATGCATGCTTGATTTGAAGCTGTCAGTTTAATCTGGTATAA
Long Flanking Sequence:
GTAGTGCATAATGACACTGGGTATACTGACCCCACCTTTCTATTAGATTTAGTTTGTGGTGATGAGATAAATGCAAGTGCTTCAATGTCTGATTTGGCCTTTGGCGAGACAGTTCACATTTTTAAGCTTAAAGAAAAATTCAGGGGTTTGTCACTGTGATTATCAATCTGGTTGTTGTATCTGTTTTTTGTAGCTTCTGTCATTTAAAAGTGCTTAAGTATGCAGCATACAGATCTGATCATCTGAAATGTCATGTTTGCAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGTAAGAAGGGGAGGAGTCTGAAATTAAATAACAGTGTTTCGCTAGTTCACATTGTTATTCTTAATGTGATGGGCAAATGTGCATTTTGCCAACTTGCATAGTGAAAGCTTTTGTCTTATGGCATGTTTTCAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGG[T/C]GAAATTTATATGCATGCTTGATTTGAAGCTGTCAGTTTAATCTGGTATAAAAATACAGTTTTTAGTTAATTTTTATTCTAAACAGCTTTGTAACAGCAAAAAAAAAAACATCACAAATTAAGGAACGTGCATAAACTAGTTTATGTATTAAATTAGATTTAATTGAGTTACTTTTATTCTGAGTGTCACAATACACCAATGCCGTAGTTTGGTTCAGTTTCCAGAGGGAGCAGGGCTTGTGCTGTTTCATCAGCAATGTTATTAAACACCAGATTCACTTTTGACTTGACTTAAATAGCACTAGCTTCATGTTAGTCAACTGATCTGGGTAAATCAAAATCTCCATATCAGAATAGTCAGAAATAAACCGCTTCCATACAGTACATTTGGAATGTTACAAAATGCTTGAAATACTCAATCTGAATAACAGCAGTATAAATCACTGCTCTCCCTTTAAGGCATTTATCAGCTTTCGAACATTAATTGTTTGAGTTCACATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6158
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000105384 | Nonsense | 205 | 700 | 16 | 26 |
ENSDART00000121729 | Nonsense | 219 | 715 | 16 | 26 |
ENSDART00000125262 | Nonsense | 193 | 688 | 15 | 25 |
ENSDART00000128866 | Nonsense | 221 | 716 | 17 | 27 |
Genomic Location (Zv9):
Chromosome 10 (position 6561271)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 6937899 |
GRCz11 | 10 | 6896599 |
KASP Assay ID:
554-5272.1 (used for ordering genotyping assays)
KASP Sequence:
TAATCCATTTTAWTGTTTTCCTGTTTGTTCAGTCACAACTGCAGACAAGT[T/A]GGATCAAGAAGGAAGTGAAAATGCAGGTGGGCANNATGTTATACATAAAG
Long Flanking Sequence:
GCGATTTCAACCAAAATAAGCAATTACACCCTATCAAACATATCTATAATAAGGAGCATGGTTGGTTACGGAGTTATTAACGCCACAAGACCAAACTAGGAAAGGATGGACTTTGAAGGAATAAACTATGGCAGGAAAGCTTCATTAAATTGCACTGAACAAGTTCTGGCCATGCATGCTCGAGGCAGGCAATTCCGTACAATTGCGTAATTTAGCAGCTTAAATTTATCGAGCTAATTATGACATCGGACCCATAACAATAAACTTAAAAGTAGCATTTATTGGCTGATAAACGATATGACCGTCTATATCTTGCATCCCTAAAATTAATCTATTTCTTTGACTACTGTTCAGGTTTTAGAGGCCGGAATGAGGAAGTATTTTCCAAGGGTAATTTACTGCATTTATATAAAATGTTCTAAAGTGTTAACTTTTTTTTTTATTATTATTTAATCCATTTTATTGTTTTCCTGTTTGTTCAGTCACAACTGCAGACAAGT[T/A]GGATCAAGAAGGAAGTGAAAATGCAGGTGGGCAATATGTTATACATAAAGTAATCATCATGTTAAAATTGATTTAAGGAATTGGGGAGGAAGTAGAATTGATGGTCTTTAAACGAATTGTCTCGTAAATTGCTAAATTTTATACAAGAAGTGTTTTCCATAGTTTTTGGAGCTGACTTGCAAAAGATCAGATACAATTTAAGGACTGATTTAATACCAGACATTTTAATCATGGTGTTTGAGTCTTTTTGCTCTTAAATGACTGATATTAAAGAGGAGGAGAGAGTTGTAGTTTGAAGTGATAGATTTTCATCTGATAAAGTATTGCTTCAAGTAAATTGAATGGCCTTTTTTTTTTCAGGACCCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18973
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000105384 | Nonsense | 684 | 700 | 26 | 26 |
ENSDART00000121729 | Nonsense | 699 | 715 | 26 | 26 |
ENSDART00000125262 | Nonsense | 672 | 688 | 25 | 25 |
ENSDART00000128866 | Nonsense | 700 | 716 | 27 | 27 |
ENSDART00000105384 | Nonsense | 684 | 700 | 26 | 26 |
ENSDART00000121729 | Nonsense | 699 | 715 | 26 | 26 |
ENSDART00000125262 | Nonsense | 672 | 688 | 25 | 25 |
ENSDART00000128866 | Nonsense | 700 | 716 | 27 | 27 |
Genomic Location (Zv9):
Chromosome 10 (position 6569553)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 6946181 |
GRCz11 | 10 | 6904881 |
KASP Assay ID:
2260-2843.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTCTTATTTGTAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCA[C/T]AAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAA
Long Flanking Sequence:
GCGTTGACGCTGAAGTCCCGTGTGAATATGGCGTTACTGTTACCCTGTAACTGAACACTCCTCAACAGAAGATAAACAGAGGAGATCAGCTCAGCCAAAAGGAGTTAAAAATCAAACATCCCTATTTTATAAGTTGAATTCCTTTTCATGTCTGAAGTTTATGAGCCTTTTTGATTGATCTACCAATTTAAATAACTCCTCCCACCACCCGTAACTTAGATAACCTTGTTGCATAAAGTTTATTTGCTTAATGTTCAGTGAATAAGTCAGTGTATGCGCTCAAAATAGTTTATCAAAGGACAACAGTGTCCTGGCTTAACTGGCTTAACATCTTTATTACTGAAGAAAGTCACCTACATCCTGGATGGCCTGAGGATGAAAGCAGCATTTATTTTTGGATGAACTTAAAGTTGAGTTTCTGAATGCTGTGGTAAACTTGAGTGTCTAAATGGTCTTATTTGTAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCA[C/T]AAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAACTGGCCTCACACCTGTTATATTTATTTTATTTTTATTTTATTTGTGCGAGCTTCTTCAATACCATTTCAGGATATTTGTTAATGTTGAATGACTAAAGTAGCATTAGGATAAAGCTGTTGTATTTAGAGTCACATTGAATGCTGTAGGTTTGACCTCAAGGACGATAATCAAGACTAATACCTTTTGGCAGTTTAATTTGATCATCTTTTTGGTATCACTCGTTTTGACTGGAGCACATCTGAAATAGTGGATTTGTTTTACTAGAGCACAAGTGCAGAAGTGGGTGGGTTTGTTTAATCACATTTTAACACTTTGCTAGGAGTGTATTGAGTTTTGTAAGCTTTGACCTAAAGGTGTTTCCTACAGTTAAATCTATTAATCAGTTCTATTGTTGATTGTGACTGTTTGTAGGTTATTTTTCTTGACATTTCCGTCTTGAAGCCAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9472
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000105384 | Nonsense | 684 | 700 | 26 | 26 |
ENSDART00000121729 | Nonsense | 699 | 715 | 26 | 26 |
ENSDART00000125262 | Nonsense | 672 | 688 | 25 | 25 |
ENSDART00000128866 | Nonsense | 700 | 716 | 27 | 27 |
ENSDART00000105384 | Nonsense | 684 | 700 | 26 | 26 |
ENSDART00000121729 | Nonsense | 699 | 715 | 26 | 26 |
ENSDART00000125262 | Nonsense | 672 | 688 | 25 | 25 |
ENSDART00000128866 | Nonsense | 700 | 716 | 27 | 27 |
Genomic Location (Zv9):
Chromosome 10 (position 6569553)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 6946181 |
GRCz11 | 10 | 6904881 |
KASP Assay ID:
2260-2843.1 (used for ordering genotyping assays)
KASP Sequence:
GGTCTTATTTGTAGGGAGGATCCTTYAAGAGCGATGAGCCGCCACCATCA[C/T]AAACATCTGCCCCGAGYGCAGCAGCTGCTGCAGACGATGAGGAATGGGAA
Long Flanking Sequence:
GCGTTGACGCTGAAGTCCCGTGTGAATATGGCGTTACTGTTACCCTGTAACTGAACACTCCTCAACAGAAGATAAACAGAGGAGATCAGCTCAGCCAAAAGGAGTTAAAAATCAAACATCCCTATTTTATAAGTTGAATTCCTTTTCATGTCTGAAGTTTATGAGCCTTTTTGATTGATCTACCAATTTAAATAACTCCTCCCACCACCCGTAACTTAGATAACCTTGTTGCATAAAGTTTATTTGCTTAATGTTCAGTGAATAAGTCAGTGTATGCGCTCAAAATAGTTTATCAAAGGACAACAGTGTCCTGGCTTAACTGGCTTAACATCTTTATTACTGAAGAAAGTCACCTACATCCTGGATGGCCTGAGGATGAAAGCAGCATTTATTTTTGGATGAACTTAAAGTTGAGTTTCTGAATGCTGTGGTAAACTTGAGTGTCTAAATGGTCTTATTTGTAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCA[C/T]AAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAACTGGCCTCACACCTGTTATATTTATTTTATTTTTATTTTATTTGTGCGAGCTTCTTCAATACCATTTCAGGATATTTGTTAATGTTGAATGACTAAAGTAGCATTAGGATAAAGCTGTTGTATTTAGAGTCACATTGAATGCTGTAGGTTTGACCTCAAGGACGATAATCAAGACTAATACCTTTTGGCAGTTTAATTTGATCATCTTTTTGGTATCACTCGTTTTGACTGGAGCACATCTGAAATAGTGGATTTGTTTTACTAGAGCACAAGTGCAGAAGTGGGTGGGTTTGTTTAATCACATTTTAACACTTTGCTAGGAGTGTATTGAGTTTTGTAAGCTTTGACCTAAAGGTGTTTCCTACAGTTAAATCTATTAATCAGTTCTATTGTTGATTGTGACTGTTTGTAGGTTATTTTTCTTGACATTTCCGTCTTGAAGCCAGA
Associated Phenotype:
Not determined