ZMP
si:ch211-284e20.6
Ensembl ID:
ZFIN ID:
Description:
REST corepressor 3 [Source:RefSeq peptide;Acc:NP_001038494]
Human Orthologue:
RCOR3
Human Description:
REST corepressor 3 [Source:HGNC Symbol;Acc:25594]
Mouse Orthologue:
Rcor3
Mouse Description:
REST corepressor 3 Gene [Source:MGI Symbol;Acc:MGI:2441920]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29845 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa25185 | Splice Site, Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa6146 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa29845
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104498 | Nonsense | 172 | 551 | 6 | 14 |
| ENSDART00000143792 | Nonsense | 172 | 547 | 6 | 12 |
Genomic Location (Zv9):
Chromosome 22 (position 41243219)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 38330858 |
| GRCz11 | 22 | 38284005 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTGTAGTTGCCGGACAAATCCATATCCAGTCTTGTAAAGTACTACTA[T/G]TCATGGAAGAAAACACGCTCCAGGACCAGCCTGATGGACCGGCAAGCAAG
Long Flanking Sequence:
CTCAGGCATGCTCGTGTCTGGATCCACAAGTATCGCTTTAACAGCCAAGAGGAGCGGAAAAGTCACCTCACAAACAGGCCAGCGGGTCAAATGTCCAAAGGGAGAGAGGTAAAGATGGAGTTTTACAGCATTTCTCCATAGTAGTGTAATAGCGGCTCGTGTGCTGAGCCTTCTTCAGTGTCAATGAAAACTGTCCAGCAAACTCACAAGCAGTTGAACTGTGCATAGTTATCTACCTTTTAAGTAGTAGGAGCGTTTTATTTACTCCCCCTTGCCTCCTTCGCCATAGTATTCTACTGTGACATTGTGCATAGGAGATAAATGACATCACTACGTAATAACCACTTATGATCTATCTATTACTGAACCCATATCGAATTTTCTCCATCTGTATCGCGGTCCACTAAAGATTATTATTTTTTTTATTGGTCAATTGAATTTTTTTTTTTTTTTTTGTAGTTGCCGGACAAATCCATATCCAGTCTTGTAAAGTACTACTA[T/G]TCATGGAAGAAAACACGCTCCAGGACCAGCCTGATGGACCGGCAAGCAAGAAAGCTGGCTAACCGCAACAATCAAGACGAAAGGTGCAGTTTTGACCATATTTGCGCTCTTGTTACAAGTACGTCTGTCACTGTAATCAGTATATGTGTTCACGGTGCAATACTAGGAGATGACCCTGATCATTATTTGGCTTTGCAATATATATTTACAAATTCACAAATAGCGTTAAAGCAATTTTGCAATGACATTTACATTCTACCTCACTCATGTCAAAGATTAGAATTGGACATTTACCTGGTGGGACATGTAATAGTATGTATAATAGGACATTGTGGCTCAGTGGTTGGTACTTTGCCTTCACAGCAAGACGGTCACTGATTCAAGTCCTAACTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCATGTTGGCATGAGTTTCCTCCGGGTGCTCCGGTTTCCCCAACCGTCCAAACACATGTGCTATAGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25185
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104498 | Splice Site, Nonsense | 201 | 551 | 7 | 14 |
| ENSDART00000143792 | Splice Site, Nonsense | 201 | 547 | 7 | 12 |
Genomic Location (Zv9):
Chromosome 22 (position 41244429)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 38332068 |
| GRCz11 | 22 | 38285215 |
KASP Assay ID:
554-7396.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTGTAGTGTTCCTGGTGCTCACTGTGTGTGTATTTCTGTGATATTAGT[G/T]AGGAGGAGATGGAAGAGGCTAACCCTGTGGAGGCCAACGACAGCGACTAT
Long Flanking Sequence:
TAATCAAATTAGCTCAAGATGACAATCATATCGCTTATTGCAACCATTTCTGTGACAATATAATCACACAGCAAAACTTCTTTATCATGATTGGTCTAATAACAAGTGCACTTAAAGGTTTATACAACAAGTTTTAGGAACAAGTAATAACTGGACTTCTAGTTGATGATTTGGTGTCAGAAGTGTCTAAGAAGAAGTGGCAGATCTCTCGCACGCCCCTATACTGAATGAACCCCAAACCATGACTTCTCCTTCACCAAACTTGACTGATTTCTATGTGAATCTTGCTCCATGCTAGTTCCAGTAGGTCTTCTGCAGTATTGGTGATGATTGGGATGCAGATCAACAGATGATCCATCAGAGAAATCCACCTTCTGACACTTTCACACGTGATCAACTAGAAGTCGAGTTACTATGTGTTGCTCTGTCCACCACAAGACTATTGTCAGGCAGTGTAGTGTTCCTGGTGCTCACTGTGTGTGTATTTCTGTGATATTAGT[G/T]AGGAGGAGATGGAAGAGGCTAACCCTGTGGAGGCCAACGACAGCGACTATGACCCAACAAAAGAGGCAAAGAAGGAGGTAAACGTGAGTTCATTACACACACATACATCCAGAGCTGTGTTGGGGAATGTGCCAAATTGCTAAATACATTTACATTTAGTCATTTAGCAGACGCTGTTATACAAAGCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCAACAATGAATAAGTGCTGTAGGCAAGTTTCAGGTGTGTAAAGTGTAAGAAGCAAAACATTAGTAATTTATTTATTTATTTTTTTGTAGTACAGTTAGCGGTGGAGCCAAAGAGGCAACTACAGATTAGGAAGTGTAGTGGAGACTAAATAGTTGAGTTTTTAGTGGTTTCTTGAAGACAGCGAGTGACTCTGCCGTTCTGATGCAGTTAGGGAGTTCATTCCACCAACTGGGCAGATTGAACGCGAGAGTTCGGGAAAGTGATTTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6146
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104498 | Essential Splice Site | 228 | 551 | 7 | 14 |
| ENSDART00000143792 | Essential Splice Site | 228 | 547 | 7 | 12 |
Genomic Location (Zv9):
Chromosome 22 (position 41244513)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 38332152 |
| GRCz11 | 22 | 38285299 |
KASP Assay ID:
554-3768.1 (used for ordering genotyping assays)
KASP Sequence:
CCAACGACAGCGACTATGACCCAACAAAAGAGGCAAAGAAGGAGGTAAAC[G/A]TGAGTTMATTACACACACATNACATCCAGAGCTGTGTTGGGGAATGTGCCA
Long Flanking Sequence:
TCATGATTGGTCTAATAACAAGTGCACTTAAAGGTTTATACAACAAGTTTTAGGAACAAGTAATAACTGGACTTCTAGTTGATGATTTGGTGTCAGAAGTGTCTAAGAAGAAGTGGCAGATCTCTCGCACGCCCCTATACTGAATGAACCCCAAACCATGACTTCTCCTTCACCAAACTTGACTGATTTCTATGTGAATCTTGCTCCATGCTAGTTCCAGTAGGTCTTCTGCAGTATTGGTGATGATTGGGATGCAGATCAACAGATGATCCATCAGAGAAATCCACCTTCTGACACTTTCACACGTGATCAACTAGAAGTCGAGTTACTATGTGTTGCTCTGTCCACCACAAGACTATTGTCAGGCAGTGTAGTGTTCCTGGTGCTCACTGTGTGTGTATTTCTGTGATATTAGTGAGGAGGAGATGGAAGAGGCTAACCCTGTGGAGGCCAACGACAGCGACTATGACCCAACAAAAGAGGCAAAGAAGGAGGTAAAC[G/A]TGAGTTCATTACACACACATACATCCAGAGCTGTGTTGGGGAATGTGCCAAATTGCTAAATACATTTACATTTAGTCATTTAGCAGACGCTGTTATACAAAGCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCAACAATGAATAAGTGCTGTAGGCAAGTTTCAGGTGTGTAAAGTGTAAGAAGCAAAACATTAGTAATTTATTTATTTATTTTTTTGTAGTACAGTTAGCGGTGGAGCCAAAGAGGCAACTACAGATTAGGAAGTGTAGTGGAGACTAAATAGTTGAGTTTTTAGTGGTTTCTTGAAGACAGCGAGTGACTCTGCCGTTCTGATGCAGTTAGGGAGTTCATTCCACCAACTGGGCAGATTGAACGCGAGAGTTCGGGAAAGTGATTTCTTCCCTCTTTGGGATGGAACCACGAGGTGACGTTCATTCACAGAACGCAAGTTTCTGGAGGGCACATACATCTGCAGAAGTGAGA
Associated Phenotype:
Not determined