ZMP
zgc:63695
Ensembl ID:
ZFIN ID:
Description:
hippocalcin-like protein 1 [Source:RefSeq peptide;Acc:NP_957458]
Human Orthologue:
HPCAL1
Human Description:
hippocalcin-like 1 [Source:HGNC Symbol;Acc:5145]
Mouse Orthologue:
Hpcal1
Mouse Description:
hippocalcin-like 1 Gene [Source:MGI Symbol;Acc:MGI:1855689]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6126 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa23737 | Nonsense | Available for shipment | Available now |
| sa43474 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa6126
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000028471 | None | None | 193 | None | 3 |
| ENSDART00000137236 | None | None | 193 | None | 4 |
| ENSDART00000147045 | Essential Splice Site | None | 73 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 31331324)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 31402537 |
| GRCz11 | 20 | 31305416 |
KASP Assay ID:
554-3756.1 (used for ordering genotyping assays)
KASP Sequence:
ATTKATGTCTGTTTTTTTGTTTTGTTTTTGTTTTTTTTCATCTTKTTTTA[G/A]TAAGAACTGGCTGTACACATCTTGTCCTGGGCCTCCTCCCCTCTGTCACA
Long Flanking Sequence:
GAATTCAAGGAATCTTGATGAACTCTGGGAGTCCTGCAAGAACGCTTTCTTTGCCATTCCAGATGACTTTAAGTTATTTGAGTAATTGCAGAGATGTATGGATGCAGACTTCCAAGCTCATGGGAGTCACACTAATTCTTTTTTCCAATGCACCATGACTTTATTTTCTATACTGTACATTATTTCTGTTAGGTGACAAGACTTTTGTCTAAGCAAAGTCAGACCTTACTGTTCTAATTAAATCGTTAAAAATTGAGATATGATCAGATTTTATTTTGGTAAAATGAGCATAATATAGTGTCATTTGCCTTTCATATAAGCCACTTCTGATACTAAATGATCAACTTCGAGTCAAGTTATTATTTGTTGTTCCTAAGACTTGGGTAGGCGACAAGACTTTTGTCAGGTAGTGTATACAATCAGAAACTCTGACTGCAATGATATACTTTTATTGATGTCTGTTTTTTTGTTTTGTTTTTGTTTTTTTTCATCTTGTTTTA[G/A]TAAGAACTGGCTGTACACATCTTGTCCTGGGCCTCCTCCCCTCTGTCACAGCGAATGAGAAACGCCTGCCTTACTCCTGTTAACCTGGAAAATATTTCTCACCTTTTCCATGAGAGTCTCTTTTTTTTTCACCAGGGAATTAAAGGTAGGAGAACAGCACATTTAAAGCTTGCTATTACCAACATTTGAAACCAGTATATTTTTTTGTGAAACAGCTCTGTGTTAAAGATATTTATTTATATATTACATTTTATGGATAAGCATGTTGCCATGACAACTATGTTCAACTACAGTAAGAAATTACTATCCCTGTCTCTTTGGTCCAAAAACACACCACAGATTTAAGAGCTTGAGGGAAACAACAACAACAATTTTAGCACACAATACTACTATTAAATCTTCAACAAAAACAACAAAAAGGCCTCTCCTATACATAGCAACCGAGAACACAGGAAAGGAGGATTAAATTAAAATAAAAATACGTAAAGTTTTTAAGTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23737
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000028471 | Nonsense | 58 | 193 | 1 | 3 |
| ENSDART00000137236 | Nonsense | 58 | 193 | 2 | 4 |
| ENSDART00000147045 | Nonsense | 58 | 73 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 31264023)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 31335236 |
| GRCz11 | 20 | 31238115 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATCTGACGGTGGAGGAGTTCAAGAAGATCTATGCCAATTTCTTCCCCTA[C/A]GGTGATGCTTCCAAGTTTGCAGAGCACGTCTTTCGCACCTTCGACACCAA
Long Flanking Sequence:
CGTTGTCCTTAGACTAGACAATAAATTTTGGTCACCTGATGTCACAACCTACATTAAATCTAACTTAATATTAACTTTTTATAACATTGTGAGCCTGCTGGCTTGAGTTTTTTGGTGAGACAACTTAATTGTGTTTATGCTCAATCCACTTAAATTGATAAAAACCAATAAATTAACTTAAATCCCCAACACAAATCGATTGTGTGGAACCTGCTTCCATGTGGATAACTCACTTTAGTCTTAAATACCTTAGTACCTACTTTTTTTTTTATTTGTGCTGACAGGAAGCATCAAGGAACTGGGAAGTGTCCAATAGAGCCTTTCATCATGGGTAAACAGAACAGTAAGTTGCGACCCGAGGTGCTGAATGACCTGCGGGAGAACACAGAGTTCACAGACCACGAGCTGCAGGAGTGGTACCGCGGTTTTCTGAAGGACTGTCCGTCCGGCCATCTGACGGTGGAGGAGTTCAAGAAGATCTATGCCAATTTCTTCCCCTA[C/A]GGTGATGCTTCCAAGTTTGCAGAGCACGTCTTTCGCACCTTCGACACCAACAGTGATGCCACCATTGACTTTCGGGAGTTCATCATCGCCCTAAGCGTGACATCCCGTGGAGGCCTGGAGCAGAAACTGCGCTGGGCCTTCAGCATGTACGATCTGGACGGCAACGGATACATCAGCCGAGCCGAAATGCTGGAGATTGTACAGGTGAGGCTTTTCACACTTTGCGTTTCTGCATATTGCTCCGCCGAGTCATTGTTTTCAGAGCAGCTTGTCCCATATCAATATTGGCTCAGTCTACTGTTTGGAGATCCAGTCCTCCTGAATAAACAGATCTCCTCAATCAAGTGTTCCACAGGCCATATGGTCTTCCTACAAATAGTGGCCAAACACAAAGGCTTTGTTCACTGCTTCAAAGGCTCTGTTGACTCTCCATGTTAATAACATAGATTTACACCTGCAGCAGAGGACATGCTATAAAACCATATCTGAGAGATACATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43474
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000028471 | Essential Splice Site | 161 | 193 | 2 | 3 |
| ENSDART00000137236 | Essential Splice Site | 161 | 193 | 3 | 4 |
| ENSDART00000147045 | None | None | 73 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 31263230)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 31334443 |
| GRCz11 | 20 | 31237322 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAGAAACGCACAGATAAGATATTCCGACAGATGGACACAGACAACGATG[G/A]TACGCCTCCTGAGAGCCGTCTCCCACTCACGCTTAAGATCCAGATAGAAT
Long Flanking Sequence:
GTCTACTGTTTGGAGATCCAGTCCTCCTGAATAAACAGATCTCCTCAATCAAGTGTTCCACAGGCCATATGGTCTTCCTACAAATAGTGGCCAAACACAAAGGCTTTGTTCACTGCTTCAAAGGCTCTGTTGACTCTCCATGTTAATAACATAGATTTACACCTGCAGCAGAGGACATGCTATAAAACCATATCTGAGAGATACATTAAATGTATCTGATGTATCTTAAGTCACGATCATCTGCATGATATGAAGTGTCGATTGAAGCAGTGACAGCTGGGTTATGGAACTTCTGACTGTCAGTTGTAGTGTTTAACTGACAGACTAATCAAATATGTTGCTACTGAAAACTGAAACCATATGCTTTGACACACAGTTCCGTTCATCTTCACAGGCGATTTATAAAATGGTGTCATCTGTGATGAAGATGCCGGAGGATGAGTCAACGCCTGAGAAACGCACAGATAAGATATTCCGACAGATGGACACAGACAACGATG[G/A]TACGCCTCCTGAGAGCCGTCTCCCACTCACGCTTAAGATCCAGATAGAATTGTAAAGCTGAAGCGTTGAAACTGAAACTGCACTGAAAAAAGTAACATAAGAATAAATACATCTTGTTTTCCATTAGATACGGAAAGTACATATAGCTACAGCTTTAAAAAGCCATGCATTCTGTTTAAAGGGATAGTTCACCAAAAAAAAAAAAAAAATATTCCCCAGAATATACCCCAAAGAGGGTATGATAATAAAATGTAAATAAAAAACAAGTCTAATGTAGGGTAAAACTAAACTATTTTCGTCATAGTATTGCCATAGTATTTCATAGACAGGTCAACTAAAACTTACTGTTTGCATTTCTGTGCTCAAGTACAACTTTTTTTTTTATGCTCAAGAACATTTTCTTTGTTTTATTTTAAAAACGTAACTCTACAGAATGTATTCTATCTCTGCCAATCCCAGTGCTGCCTCTCACTGGCTTTAATGACAGTACAGTACTGTAG
Associated Phenotype:
Not determined