ZMP

zgc:112165

Ensembl ID:

ENSDARG00000053010

ZFIN ID:

ZDB-GENE-050522-229

Description:

Lysophosphatidylcholine acyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q502J0]

Human Orthologue:

LPCAT2

Human Description:

lysophosphatidylcholine acyltransferase 2 [Source:HGNC Symbol;Acc:26032]

Mouse Orthologues:

Lpcat2, Lpcat2b

Mouse Descriptions:

lysophosphatidylcholine acyltransferase 2 Gene [Source:MGI Symbol;Acc:MGI:3606214]
lysophosphatidylcholine acyltransferase 2B Gene [Source:MGI Symbol;Acc:MGI:1918152]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6082	Nonsense	Mutation detected in F1 DNA	Not yet available
sa31581	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa6082

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074963	Nonsense	333	529	10	14
ENSDART00000128334	Nonsense	333	529	10	15

Genomic Location (Zv9):

Chromosome 7 (position 36854007)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	35127850
GRCz11	7	35399327

KASP Assay ID:

554-3784.1 (used for ordering genotyping assays)

KASP Sequence:

AACTGACTCTGCCTATGGAAGCTGGACTAGTGGAGTTTACCAAGAYCAGC[A/T]GAAAATTGGAGTAAGAAAAYAGTTTATACGTGTAATTTTAAGAATACCAA

Long Flanking Sequence:

TATTTACGCAATAAGTACATTGTAATGAATGATTAATTTCAGTGTAAGTACATTTTAATTAAGGACACTTAATATAAAGTGGGGCCGACTTTTTTTTCAAATCAAAGTTAAAATTACCCAGTCAAAGTGCACTTTTGCTTATGCTTTTGAAAACACTATTGGTTGGGTTTAGGTCAGTGGTTCTATAGGCGATCTATATGACAAGTCTTGCCTTCTTGTGAGCAGATGACTAGAATAATGCTTAATGCACTATAAAATGTAGCATAAAGCATACATTTTCATTGGGCCTCGATTGGAGATTATATTTCACAGACATTTAAATTGTAAACACAGTAAAGTATTTCAGTGTAAATATGTTTATCACAAGTTATTGTGCGTTTACTAGATCTCTGAAGCTGCCAGTCACAGACCACACTTATGAAGACTGCCGTTTGATGATTGCTGCTGGAGAACTGACTCTGCCTATGGAAGCTGGACTAGTGGAGTTTACCAAGATCAGC[A/T]GAAAATTGGAGTAAGAAAACAGTTTATACGTGTAATTTTAAGAATACCAAATATGCATAAACTTGTTGTTTTCATATTGGTGGTGTAATGGTACACCTAAATTAGGGTTAAATATGTATCTTGGTCTTAAAATCACAATGTGATACATTTTCAGTAGAACCTGAAGAAACCAAAACCTGAAAATGTCTTCTTTTTTAATGAAACACTTATTTACTGAACAATTTGTGGCTTTATTTTTAAAGAAATATAATTAGCATTTCAATTCGTCGAATACAAATTTGGAAAAGAATAAACACAAATGAACACATAAGCTAATATAATAATTTAAGCAAGCTGTGAGCACTTAAAGAGGTAAATGTAATGCTACTTGATATATTGGTTATTTATAACGAACTGTAAAGAGGAAGGAAGGAAGAAAAGGAAGGAAGTACTGTCTTCATTTGCGCTTTGTAACTTTTATTAAAGCCACCTATACAACAATCTGTCTCTGTTACAACCGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa31581

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074963	None	None	529	14	14
ENSDART00000128334	Essential Splice Site	None	529	14	15

Genomic Location (Zv9):

Chromosome 7 (position 36848357)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	35122200
GRCz11	7	35393677

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAGAAAGATGACTGACTCAGATGAAGGAGATTGAGCATGCAGACATAAGG[G/A]TAATACTCCAAGCCATGCCATCTGAACATGTGCCTTAAGCCTGCATGGGT

Long Flanking Sequence:

TCAAATTGTTTTGAAATGAGGAATTAGTTTTGTACTGTAGTACTTTCAGGAAGTTTTAATGACCTCTGAGCTCATTTCAGGTCATCAGCTACATGTTTTAGCCTACTTGAATACCTCAAATACATTTTCAGGAAACATCTGTGCCTGATTCAAACATACTCTTTACCTATTATAGCTGGTTACTAATTTCATCCCTGTCTATTACCTCGCTTCATTAGTCTGCTTTCATTTTGAGTTCAAATTTCTACTAACTTTGCTATTTCAATGTCTCTGTCAGATGAGTTTCGTTCCTTCGCTCTCAATCATCCCGAATATGCAAAGCTCTTCACCACCTACATCGAGCTCCAGCGTTACCAGGGTCTACAGGGGGACGAGACTGACTTCGACAGTGCTTTTTCTCACTGCTGTACTGCTGCTTATGATGAGTATCAGGAGGACAGTGCCTCTGATAAGAAAGATGACTGACTCAGATGAAGGAGATTGAGCATGCAGACATAAGG[G/A]TAATACTCCAAGCCATGCCATCTGAACATGTGCCTTAAGCCTGCATGGGTGGTGTGCTTCTGCAGACGAGCACATGCCCTATCAAAAAATCTAGTTTTCTGTTTACAGCATCAAGTGTTTCATAAACTATTTAATGATTTATTTAAAAGCTTGTTTATATGTATAAGCATGCTGAAACTGTTCTTATTGTGATTAAGGTAAAAACATATCTGCAGCTTTTAGACTTAATGGCATGTAATTCCACAGTTTTATATGAAATCTAATTAATACTTTTGAATTGCTTATAAATAATTAGAGGAAATGTAGATTTTTTTAGATTAGGTACTTTCATTACACACACATGAAAAAACATGAAAGTTTTTTTTTAACTTGTATATTATTGCATTCATTCATTTTCTTTTTAGCTTAGTCCCTTTATTATTCAGGGGTGGCCACAGTGGAAAACAACACCAACTTATTTATGTTTTTGCGCAGCCCTTTCAGCTACAACCCATCACTGG

Associated Phenotype:

Not determined