ZMP
trmt2a
Ensembl ID:
ZFIN ID:
Description:
tRNA (uracil-5-)-methyltransferase homolog A [Source:RefSeq peptide;Acc:NP_956223]
Human Orthologue:
TRMT2A
Human Description:
TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24974]
Mouse Orthologue:
Trmt2a
Mouse Description:
TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:96270]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1336 | Nonsense | Available for shipment | Available now |
| sa20409 | Nonsense | Available for shipment | Available now |
| sa6055 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa1336
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046384 | Nonsense | 171 | 619 | 2 | 12 |
The following transcripts of ENSDARG00000002830 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26210962)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 24038227 |
| GRCz11 | 5 | 24542027 |
KASP Assay ID:
554-1250.1 (used for ordering genotyping assays)
KASP Sequence:
AGAAGAGGAAACAGGAGGAGGAGGCGGACAGCGGGCAACCTGGTGCCAAG[C/T]GAAATACAGGGAGCCAGGAGGCAGAAAAGGAGGAGGAAGAGCCTCCCAGT
Long Flanking Sequence:
TTGCCGTTGACCAGAATGATCCAGCTGGTTTATTACCCAGTGCAGAGGAGAAACCAGAAGAACTGACGGAGGAGAAAATCCAAGAGAACGAGCCAGAAGACTCGACAGAGAAGAAAAACCAAGAGAATGAGCCAGAAGCAGCAGAAGGACAGGCTGCAGCAGGGGATGTTTACCGCTACATCAAGGAGGATCTCTTCACCTCCGAGATCTATAAAGTGGAGATCCAGAACCTGCCCAAGTACATTGGATTTAACGACCTGAAGAAGTTCCTCAACAAGCATGGGATTAATCCTCACAAAATCAAGCTGCTCGGCAGACAAAAGTTTGCCTTTGTCACTTTTAAGAACCAGGAGGAAAGGGACAAGGCCATGAAGGCAGTGCATGGCATGCAGTGGAAAAGTAATGTGCTGAGTGTTCGGCTGGCCAAGCCCAAAGCAGATCCCATCCTCAAGAAGAGGAAACAGGAGGAGGAGGCGGACAGCGGGCAACCTGGTGCCAAG[C/T]GAAATACAGGGAGCCAGGAGGCAGAAAAGGAGGAGGAAGAGCCTCCCAGTATACAGATTGCCAATGCCGTGACCCCATTGTGGAAAGTGCCTTATGAAGAACAGCTGATGATGAAAGAGAAAGAAGTCGAAGGTGTTCTCCAAAAACTCGCCAGGTATTTTCTGATGAGGTTACTTAATGGCTTTAAGATATATACCGTAGTCAGCATTTGACCATATTTTAGTCAACAAATGGATCAAAAAAGTTTTTTAATACTGTCCTAAGACAGGAATGGGTGTTGATAAATCATTTTAGGATAACTTTGATTAGAGGTTTTGATCTACTTTAAATGTTTACTGCTGTATATTCATAAATAATTTAGTTTTTTTTATATCACTGCCATCTATACATTTAAATACAAGCTTCCAGTGGCAAGTTATGTTGATTAGTAAATCTTTTAACTATCTTCCATATTTGTTTTCAGAGAAATTGGCAACAACAACAAAGCCATGCTTCCGTGG
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa20409
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046384 | Nonsense | 205 | 619 | 2 | 12 |
The following transcripts of ENSDARG00000002830 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26210860)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 24038125 |
| GRCz11 | 5 | 24541925 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACAGATTGCCAATGCCGTGACCCCATTGTGGAAAGTGCCTTATGAAGAA[C/T]AGCTGATGATGAAAGAGAAAGAAGTCGAAGGTGTTCTCCAAAAACTCGCC
Long Flanking Sequence:
CGACAGAGAAGAAAAACCAAGAGAATGAGCCAGAAGCAGCAGAAGGACAGGCTGCAGCAGGGGATGTTTACCGCTACATCAAGGAGGATCTCTTCACCTCCGAGATCTATAAAGTGGAGATCCAGAACCTGCCCAAGTACATTGGATTTAACGACCTGAAGAAGTTCCTCAACAAGCATGGGATTAATCCTCACAAAATCAAGCTGCTCGGCAGACAAAAGTTTGCCTTTGTCACTTTTAAGAACCAGGAGGAAAGGGACAAGGCCATGAAGGCAGTGCATGGCATGCAGTGGAAAAGTAATGTGCTGAGTGTTCGGCTGGCCAAGCCCAAAGCAGATCCCATCCTCAAGAAGAGGAAACAGGAGGAGGAGGCGGACAGCGGGCAACCTGGTGCCAAGCGAAATACAGGGAGCCAGGAGGCAGAAAAGGAGGAGGAAGAGCCTCCCAGTATACAGATTGCCAATGCCGTGACCCCATTGTGGAAAGTGCCTTATGAAGAA[C/T]AGCTGATGATGAAAGAGAAAGAAGTCGAAGGTGTTCTCCAAAAACTCGCCAGGTATTTTCTGATGAGGTTACTTAATGGCTTTAAGATATATACCGTAGTCAGCATTTGACCATATTTTAGTCAACAAATGGATCAAAAAAGTTTTTTAATACTGTCCTAAGACAGGAATGGGTGTTGATAAATCATTTTAGGATAACTTTGATTAGAGGTTTTGATCTACTTTAAATGTTTACTGCTGTATATTCATAAATAATTTAGTTTTTTTTATATCACTGCCATCTATACATTTAAATACAAGCTTCCAGTGGCAAGTTATGTTGATTAGTAAATCTTTTAACTATCTTCCATATTTGTTTTCAGAGAAATTGGCAACAACAACAAAGCCATGCTTCCGTGGTTGTTCGTCCAAAAAGAAAAACACAACAAAATGTGTTGTCCACTCGAAGCCATACGACCATCACCCCTGCAGGTAAACCTATGTGCTCACATAAATTGTAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6055
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046384 | Essential Splice Site | 222 | 619 | 3 | 12 |
The following transcripts of ENSDARG00000002830 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26210500)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 24037765 |
| GRCz11 | 5 | 24541565 |
KASP Assay ID:
554-3884.1 (used for ordering genotyping assays)
KASP Sequence:
CAAGNNNNNNNNNNNNNNNNATCTTTTAACTATCTTCCATATTTGTTTTC[A/T]GAGAAATTGGCAACAACAACAAAGCCATGCTTCCGTGGTTGTTCGTCCAA
Long Flanking Sequence:
AGGAGGAGGAGGCGGACAGCGGGCAACCTGGTGCCAAGCGAAATACAGGGAGCCAGGAGGCAGAAAAGGAGGAGGAAGAGCCTCCCAGTATACAGATTGCCAATGCCGTGACCCCATTGTGGAAAGTGCCTTATGAAGAACAGCTGATGATGAAAGAGAAAGAAGTCGAAGGTGTTCTCCAAAAACTCGCCAGGTATTTTCTGATGAGGTTACTTAATGGCTTTAAGATATATACCGTAGTCAGCATTTGACCATATTTTAGTCAACAAATGGATCAAAAAAGTTTTTTAATACTGTCCTAAGACAGGAATGGGTGTTGATAAATCATTTTAGGATAACTTTGATTAGAGGTTTTGATCTACTTTAAATGTTTACTGCTGTATATTCATAAATAATTTAGTTTTTTTTATATCACTGCCATCTATACATTTAAATACAAGCTTCCAGTGGCAAGTTATGTTGATTAGTAAATCTTTTAACTATCTTCCATATTTGTTTTC[A/T]GAGAAATTGGCAACAACAACAAAGCCATGCTTCCGTGGTTGTTCGTCCAAAAAGAAAAACACAACAAAATGTGTTGTCCACTCGAAGCCATACGACCATCACCCCTGCAGGTAAACCTATGTGCTCACATAAATTGTAATTAACATATTTAAAGAGCCCCTGTTATGCCTTATAAAAGGTCATATTCTGGTTTTGAGGGTGTCCAACAACAGGCTGATATGCATGCAAGGTCAAAAAACACTTTCATTGTCTTATAACATGCATTTACTTTTACCCACTTATCCCATATGGTTTGTTAAGCGATTCAGCGGTTCCCAAACCCCTCCTTAGCGCGAAGCTAATCTGTGCTGATTGGTCCGATGACCCATTCTGTTGTGATTGGTCAACTGGGTTCAGCATGAGAGAAATGCCCACCACGGCTATGAAATAGCAGATTATAGCCCCTTTCACACATACAGACCTTTCTTGTTGTAGGTTGTATGTGTGAACAGGTCCTTTTT
Associated Phenotype:
Not determined