ZMP
si:dkey-119f1.1
Ensembl ID:
ZFIN ID:
Description:
structural maintenance of chromosomes protein 6 [Source:RefSeq peptide;Acc:NP_001121806]
Human Orthologue:
SMC6
Human Description:
structural maintenance of chromosomes 6 [Source:HGNC Symbol;Acc:20466]
Mouse Orthologue:
Smc6
Mouse Description:
structural maintenance of chromosomes 6 Gene [Source:MGI Symbol;Acc:MGI:1914491]
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa6006 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa19667 | Essential Splice Site | Available for shipment | Available now |
sa38310 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39764 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39763 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa14490 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa6006
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081633 | Nonsense | 65 | 1090 | 2 | 26 |
Genomic Location (Zv9):
Chromosome 2 (position 6015211)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 6460939 |
GRCz11 | 2 | 6372821 |
KASP Assay ID:
554-3916.1 (used for ordering genotyping assays)
KASP Sequence:
GGTGGGCATTATCGAGAGCATCTCTCTGAGAAACTTCATGTGCCATTCGT[T/A]GCTCGGGCCCTTTGCGTTTGGTCCAAACGTCAACTTTGTCGTAGGAAATA
Long Flanking Sequence:
GGCATCCAGAGACTCGCGAAACTTCCCACCCTACTCATAATTCTCTCTTCATATAGCCGTATGCCTATTACATATCCATAAAACACTGTGATATAACCGCGCTCGGATCGGATCACTTTCTCACTGCAATCGAACCGCTCCAGGGTTCGTTTCAATCGAGCCGAGACCACCTCATTCAAGCGATCTCGGAGCGATTACTTTGGCGCGGAACAGAGCGCGATTGCCCTGTTCACATATGCCAATCGAACCGCGCTAACTGGGCAAACGAGATACGTTCCGAAACAAAAGTGTAGGTGTGAAAGCACCCTAAGACATACTTGACACAGAACAAATGTCTTGCCAGCTAAGTTTGTTGTGTTGTAAAAAAATCAGAGATATTTTTTGTTGTTTTCAAATGATTTTTTCACATCTTTGTGTGTGTGTGTGTTTGTGTTTTCAGGTGACTGGTGAGGTGGGCATTATCGAGAGCATCTCTCTGAGAAACTTCATGTGCCATTCGT[T/A]GCTCGGGCCCTTTGCGTTTGGTCCAAACGTCAACTTTGTCGTAGGAAATAATGGAAGTAAGTACGGGACCTAAAATTTGCCACAGTACAGTTGAAGTCAGAATTATTAGCCCCCCTGTTTATTTTCCCCCCAATTTCTGTTTAACGGAAAGAATATATTTTTTTCAACACATTTTTTCAACAATAGTTTTAATAACTCATTTCTGATAACTGATTTATTTAATCTTTGCTATGATGACGGTGCATAATATTTTACTAGATATTTTTCAAGACACTAGAATTCAGCTTAAAGTGACATTCAAAGGCTTAATGCAGTGGTTCTCAAAGGTTTTTCATCAAGTACCATCTCAGAAAAAAGTTGTCATTGCAAGTACCACCATAATGAGTAGTAAATAGTGAAATACAGTAGCGTATTAGGTCCAGTAAAGCAGCTAAAAGCGTATGCATATTAGTTCCTATTATTAAGAACATTTAAATTAAAATGTGCTTTTAAAAATTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19667
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081633 | Essential Splice Site | 165 | 1090 | 4 | 26 |
Genomic Location (Zv9):
Chromosome 2 (position 6010893)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 6456621 |
GRCz11 | 2 | 6368503 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGAATTTCCAGTGAGGGAATCCGAACGTACAAACTTAAAAGCCACACCGG[T/C]ATGCCTACAATTACACTAACGGTTTATTTTTGGGTAGCTTTAAGGGATAG
Long Flanking Sequence:
TTGTTGTTCCTAAAACTTGGATAGGCGACAAGACTTTAGTCAGGTAGTGATATGAAAACAAGCTATTATGTGTTTTGTAGAAGCTGGCATGCATGACCACAAATTATTTCTTTTGAATTTTGTGTATAATTGTTTGGTGTGTATTTGTGTGTTAGGTGGGAAAAGTGCCGTGCTGACAGCTCTGATTGTAGCCCTGGGCGGTAAAGCTCTCACCACCAACCGAGGCTCCTCTCTCAAAGGATTTGTTAAGGAAGGAGAGAGGTACAAACACACCCATCCTGTTTTTCCCTGCATGTAACCACAGTCTGTATTTAGTCTCTCACACTGTTTAATTTGTGTGTGTGTGTGTGTTTAATAATCAGCTCTGCAGATGTGTCCATCACGCTGAGAAACAGGGGTCGTGATGCGTACAAACCGGAAAAGTTTGGCCAGTCCATTGTGGTTGATCTTCGAATTTCCAGTGAGGGAATCCGAACGTACAAACTTAAAAGCCACACCGG[T/C]ATGCCTACAATTACACTAACGGTTTATTTTTGGGTAGCTTTAAGGGATAGTTCACCCAAATAGCAACATTTTCTCTATTTTTACTCGCCCTCTTGGGGTTTCAAACCTTTATGAGTTTCCTTTTTCTGTTGAACCCAAAGGAGATTTTTTTAAGAAAGCTAGAAACCTGTAACTAGGGGGCTAATAATTCAGGAGTGCTAATAATTCTGACTTCACTTCTATATTCATGTGTATACAATAATAATAATAATAGTAATAATTCCTTACATTTATATAGTGCTTTTCTGGGCACTCAAAGTGCTTTACATAAAGGGGGTAATCTCCTCATCCACCACCAGTGTGCAGCATCCACCTGGATGATGCGACGGCAGCCATTTTGCGCCAGACCGTACACCACACACCAGCTGATTGGTGGAGAGGAGACAGAGTGATGAAGCCAATTATGATATGGGGAGGGTTAGGAGGCCAGTGGGCAGATTTGGCCAGGATGCCAGGGTTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38310
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081633 | Nonsense | 480 | 1090 | 13 | 26 |
Genomic Location (Zv9):
Chromosome 2 (position 5988672)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 6434400 |
GRCz11 | 2 | 6346282 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCGACTCTAAACAGCGTGACCTGGCCGCCATGGAAAGTAGTCGAAATAAC[C/T]AGCTTCGTCGTTTTGGCGAGCACATACCAGCACTGATGGAGGCTATAGAT
Long Flanking Sequence:
CAGAAGTGTTGTTCAGCCACTAAAATCTTCCGATAAAAGATTGATCAGACTATTTTGAGTTTCATAAGGGACCTTTTACAGCATCTATAATGTAGATTTTAAATTAGTTTAACAACAAAACCCCAGTAAATAATGCTATTCCGCCTTGTCTCTCCCTATATTGTTTACCATCCAACTCTAAATATTCACTCTGAAATAGCATGTCAGTTTGGCTTGCTCGCTGCCGGACAAGCAGTAGTCGCTTTTAACACATGAGAGAGGGTTCTTTTGCTGTGCTCGTATTTAAGATGCGTGGCTCTAGACGGCAGGGGAGGGACTGTGATTTAGAGATTTATGCTAAGCTGTTAGCATTGTAGAAGATCACCTACTGCACCTTTAAATTTTGTTTTCTATTTCTTTTTTTTCCCCCATAATTCTGTAGCCGTGAAAGGCAGGACCTACAGCGTGCGATCGACTCTAAACAGCGTGACCTGGCCGCCATGGAAAGTAGTCGAAATAAC[C/T]AGCTTCGTCGTTTTGGCGAGCACATACCAGCACTGATGGAGGCTATAGATGAGGCTCACCATCGAGGGAAGTTCAGGATGAAACCTGTCGGGCCGCTTGGTAATATCCTGAAGGTTTCATTTACACAAGCTACCCCAGATTGTTTATTTCAGGATGGATTGAGCACAAAGTAAATATATATTAACATTTTCTTGCAAAAAGGAATTCAGTGCAACATTTTATACAACAAATCTGACTCAGTTACACCAATTCTGTCAGAAGGAATGGGACAAAATTCCTTCAAACTGTTGTGAGAAGCTTGTGGAAGGATACCCAAAACATTTGACCAAAGTTATACGGTTTAAAAGTAAAGCTAAAAAAAACCAAGGAAATGTGTGTTAACTTTTGACTGTAGAAATTAATAAACAAATCTAATAAAAAATTATCTCATTATTCTGGCATTTAGCAAATGTAAATCGTTTAGGTAATCCTAACGGACCTGAAATAGTAAACATCTAGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39764
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081633 | Nonsense | 681 | 1090 | 17 | 26 |
Genomic Location (Zv9):
Chromosome 2 (position 5981769)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 6427497 |
GRCz11 | 2 | 6339379 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTAAACTAATGTGTGTCTTCTTTTTTCCAGACATTTGCAGTCTGCTCTA[C/T]AGACCCAGAGAGCACAGTTGGATCGCTTTCAGCAGGACATGCAGCAGGTC
Long Flanking Sequence:
GGCCTTTACATATTTTCACTCATTCATTCATTTTCGGCTTAGTCCCTTTATTAATCAGGGGTCACTACAGCGGAATGAATCATCAACTTATCCAGCATATGTTTTTCGCAGCAGATGTCCTTCCTGGTGCAACCTATCACTGGGAAACACCCATACACTCTCATTCACACACATACACTACGGACAGTTTAGCTTATTCAATTTACCTGTACCACATGTCTTTGGACTTGTGAGGGAGCGACCTGAAGGAAACCCACACTAACACTCGCTTTGGATAAAAGCGTCTGCTAAATGACTAAATGTAAATGTAAACACAGGGAGAACATGCAAACCCCACACAGAAACGCCAACTGATCCAGCCGGGGCTCATATCAGCGACCTTCTTGCTGTGAGACGACAATGCTACCTACCGCCCCGCCCGAAGCCAGTTGTTAACAGCACGAATTGTGACCTAAACTAATGTGTGTCTTCTTTTTTCCAGACATTTGCAGTCTGCTCTA[C/T]AGACCCAGAGAGCACAGTTGGATCGCTTTCAGCAGGACATGCAGCAGGTCGGTGAGGAAGAGAGGCAGAACCAAACTCTTCTTCGCAGAGCTTACGACGACCGCAAGAAAGTCCAGGTTACTAAAATACCAGCAGCGCACATCACTACATTATCGAGATTTAACTAAATGTGCCCTAAGATTTATTTATTTCATTTTTTTTTTTTTTTTTTTTGCTAACAGGAACGTTCCCGGAAACTTCAGGCAGAGTTGACGGAATTGCAGAACGTGGAGGAACCTCAATCAGAAGACCTAAAACCTCTGGTAACAAACAAATTTCCTTCAAGAAGATTAATATGCCTTTGTATTTGTGTAATTTACCCGTCTCATTTTGTGTGGGTGTTCAGGAGGAGGAACTGGAGGAGCTGAGCGGACGCATAAGTGTTTGTGGAGAGGAGTTCGAAGCTCTGCGGAGACAGACACAAACCTGCAAGAAGGAATATGAGGAGGCTGAGAAAGTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39763
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081633 | Nonsense | 823 | 1090 | 20 | 26 |
Genomic Location (Zv9):
Chromosome 2 (position 5976934)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 6422662 |
GRCz11 | 2 | 6334544 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACAACAGTGATCAGGAGGTGGAGAGGAGTAAACACCACAGAAAACACTA[T/A]GAGGAAAAACGAAAAACCCACTTGCAAATGATCGAGACACTAAAGACGAG
Long Flanking Sequence:
CAGTGCTTTTAAATTTTCTCCGTAAATAAAACTTGTATCAGAGTTGCAGCAATGTTTTGTTGCCTTGTCAATTACTATGAAAATGATTGATGGTTTTAATCTGGTTTCATCTGTCATCATTATAATTTAAAGTGAAGCCAAAATTTGCATGATGCATACCACCCCAACCCATTATTAATGTGTTCAACATATTAAAAGAAAGTTTGAAAAATGAAGCAACGTCACAGTCTGTGCGATTAGCTATTATAGGACGCTGTTGCAAGCACCTAATTTTTCAACTATCAAATAACAGAGTAAAACAATAATTGTCATGAAAATTTTTACATGTAATTCTGTTTTTTTTTTTATGTTTGGCACGTGTTTGGGCGATCAGTATGTTTTGGCTTACCCTTTTTTGGATGTAAACCGTAAACAATTTTGTTTTTACGTGATTGTATGTAGGAGCGTTTGAACAACAGTGATCAGGAGGTGGAGAGGAGTAAACACCACAGAAAACACTA[T/A]GAGGAAAAACGAAAAACCCACTTGCAAATGATCGAGACACTAAAGACGAGCCTGAATCAGAAGGAGCAGGAATTACAGGTAAAAAAAAATATGTTTTAAATAGTTTTAAATATGAAAAGAATAGTGTGTTTTTTATTATTATTATTTTTATTTTTATTTTATTTTTTTACAGGCTGCAATTGCAAAGGCCTCAGAAATCTGCCCAGAGCGCTCGGATGTGAGGAGAACGGCGAAGAGTTTGGACAGCGAGATCAACCGACTGAAAAGCAAGATCAATACACAGCAGGACCAACAGGGACACAGAGACACCATCGTCAGGTACATTTACAAGCTTCACGAAGTATTTCAAAAGAATGTGAGCTGATGGTGTTTCACCCAAAAGTCTAATTAAAGAAACTAGTAATTGTGTGTAATATCTAGAAAAAAAGTTCCAGGATTATTAAAGCTAATAAAAAATAAGTTTGCAGTCAATTTACTCATCCTGCAGCTCTGTCCATCCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14490
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081633 | Nonsense | 1019 | 1090 | 24 | 26 |
Genomic Location (Zv9):
Chromosome 2 (position 5968554)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 6414282 |
GRCz11 | 2 | 6326164 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGCTTCGTCCTGTCACTGTGGGAAATTGCTGAAGTTCCTTTCCGTGCCT[T/A]GGATGAGTTTGAKGTCTATATGGTACAAAAAAACAAAAATAACCTGGTTA
Long Flanking Sequence:
GTGTGCGCCATCACATGCAAGGTTTTTGTATTTATAACCACCTCAGAGGATATTGGGGGTCATTTTGGGGGTCGCAGGCAGAAAAGCTTGGGAACCCCTGCTTTAAATAAAGTTTATTCAGCAATAATTCTCCAGAACTGATAGCAGATCCTTAAAATGGCTTGAGCCCTTAAAATCATCCCAAATTCTCAAATTTGAAACTTAAATATATTTTGAGAAAATGAAGGGTGAGTAAATGATGACAGATTTTAAATTTTTGGGTGAATTTACAATCATATTTTATAATTATAAATTGTGGTCTTTTTGCACCCTTGACACAATGCTTTTTTTTTTTTTTCGTGATGATGATTATGTGTTTTTTTCCCTTCAGGTTCAGCCAGGAGAGGGTGGGAAGGCTGATCTGAGTGACATGCGTTCGCTATCTGGAGGAGAGCGTTCGTTTTCCACCGTGTGCTTCGTCCTGTCACTGTGGGAAATTGCTGAAGTTCCTTTCCGTGCCT[T/A]GGATGAGTTTGATGTCTATATGGTACAAAAAAACAAAAATAACCTGGTTAGACTGTATCTCGCACAGCAAGTGTGTATTGTGTGAAGACTTGTATTCTTTAGAACAGTGGTTCTCAATTCCAGACCCCCCATCCTGCACATTTTGTATGTCTCACTTACTCGACACACAAGGATCAGTTCAGGAATCTCTCCTTTAACGAGCTGATGATCTGAATCAGGTGTGTTAAAGAGCCATGACACCCCCCACTTTCAGTTCAGGTTCACCTTAGATTTTTTTCAAAAGATGCATCATTATGGGCGTGGAGCTCCGAGCAAAGGGCAGGGGTGGGCGTGGCCAGTGGAGGAGGCGAGGAGGGGAGCGAACAACTGGTTGTCAGTCGGCTCACAAAATTGATGACCCATGATTTAATAGTTTACAAAGTTAAAATGCAAAGAAATAAACAGTAATTTAAATGCTACATTTGTTATTCGTAATTTGATATACAGATAACCACAATTTA
Associated Phenotype:
Not determined