ZMP

nr1d2b

Ensembl ID:

ENSDARG00000009594

ZFIN ID:

ZDB-GENE-990415-244

Description:

nuclear receptor subfamily 1 group D member 2 [Source:RefSeq peptide;Acc:NP_571140]

Human Orthologue:

NR1D2

Human Description:

nuclear receptor subfamily 1, group D, member 2 [Source:HGNC Symbol;Acc:7963]

Mouse Orthologue:

Nr1d2

Mouse Description:

nuclear receptor subfamily 1, group D, member 2 Gene [Source:MGI Symbol;Acc:MGI:2449205]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa36820	Nonsense	Mutation detected in F1 DNA	Not yet available
sa5921	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa36820

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000127353	Nonsense	67	578	2	8

The following transcripts of ENSDARG00000009594 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 19 (position 19390480)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	17943615
GRCz11	19	17402180

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTCATGTGGCCTCTCATTCTCGCCCACCAAGGCATGGTGGAGGGAAAGCA[C/T]GATCACTCTCCTCCACCAAAAGTGGCATTACAAGTAAGTGACTATATTAA

Long Flanking Sequence:

TACGGAGAGCACAGAGTCAAGTCCACTTTCTGGTCATATAAATGGCTGTACTTTTAAATAAATCTTAAGAACAAAGAAAACTTGTTTTGTTTTTTTATACGGATTGCATCTACTCTGTATCTATTAATATTGTTGTATTAACAATGACAAAGGCTGTTATATGTCAGCAGTTATATATAAAAGTTTAAAACAACATTTTGCTCATGTTTTATACTCAGTTACTTCATAATAGATATGTACATATTAGGATCCATGTAATTTAGAAAACAGCAAGCCTAACAGAAGTCTTCTTGTCTTGCTCTTTTGTGTGTCATCCACCAGGTGGAGTAATAGCTTACATTAGCTCCTCAAGCTCAGCCTCCAGTCCAGAGTCGTGCCACAGTGACTCCTCCAACAGCAGCTTTCAGTCCTGCTCTCCACCCCATACAGGGCAGGGCCAAGGCGAGACCCTTCATGTGGCCTCTCATTCTCGCCCACCAAGGCATGGTGGAGGGAAAGCA[C/T]GATCACTCTCCTCCACCAAAAGTGGCATTACAAGTAAGTGACTATATTAAAATCTGGTTAAACAGAACAAGAAATGCTTTCATACTAGAAGCAAACATTTTTAAGATTAACATAATGTAACATTCATTTTTAATGTTACTGCATGAATATATATGATTTATTTTCCTATCCTAGCAAAAGAAAAACTTTATTGTATTGCCTAAACATTCATTCATTATTTTGCATTCCCTATTATTTATTTTATTTTTAATAGTAAAGTATGCATCTATGCTTAATAGCAGGGAGCTCATAATGCAAACACAGAAACAGACTCAGAAAATTGCTATGCTTTGCATTTAAACTGTTTGCTTCATCATGAAGTAATGGTCTAGCTATTCGAGGAAACGGAAAATAGTCAAACAGAGCGCAGAGTATTCCTTATCTCATTTTCTGTATTTCTGCTCCTGCAGAGATTAACGGTCTGGTGCTGCTATGTAAAGTGTGTGGAGATGTGGCGTCAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa5921

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000127353	Nonsense	311	578	5	8

The following transcripts of ENSDARG00000009594 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 19 (position 19392567)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	17945702
GRCz11	19	17404267

KASP Assay ID:

554-3777.1 (used for ordering genotyping assays)

KASP Sequence:

AGACTCAGGAGGTCTTGAACYACCAGAACAATGTGTCCTCAGTAAGTGAA[C/T]AGAATCCACAGTCGAGCTGTGGTCCACAGGGTCCTGAAGACTCTGGTCAA

Long Flanking Sequence:

TAATGGTTGTGAATTGACTGTGTCTGTGCTCCTTAGCTGTGCGTTTTGGCCGGATTCCCAAACGAGAAAAGCAACGCATGCTGCTTGAGATGCAGAATGCTATGAACAATATGATGAACAACAGCCACGGCAACCAGTCCCTTAACAACCAGACTTCAGCTGCTGATGGCACTTCTGAGGATGGCACTTCTGAGGATAGTACTTCTGGTCCTTCCTCTCGATCCCCCTCAAGCTCACCCAGGAGCAATCGATCTGAATCCAGCCCAGATCCTGAGCTGCAGATTGCCATGGATACAAGCTCAAGCTCAGACTCATCCAGTGCTACTGACAGTGGAGAAGAGGAGGTTATTGGCACAGTCACTAGGGCACATCAGGAGACATTCATGTATAATCAGGAGCAGGGCAGTATGGCTTCAGAGGCGCTTAATAACTACAGCCATTGCACAGAGAAGACTCAGGAGGTCTTGAACCACCAGAACAATGTGTCCTCAGTAAGTGAA[C/T]AGAATCCACAGTCGAGCTGTGGTCCACAGGGTCCTGAAGACTCTGGTCAAGACTACAGTACTCTGAGCAGCTGTCCAGTCCGACTTTCCAATAACAGCTCCAGGGGACCATCTCTGCAGACCCTTACTTTTAGAGCTCACAATGATCATGAAACCCATGCCAATGGCAGCTATATTGTCCCAACATTTCCAAGAGCAAACAGGATGCACCTGGTGAGTACCAGTACCAAAAGAGCAATACCAAAATTTCAGTTGTCCATTCTGAAACTTTCATGATGCTATTTTACAGGTCTGCCCGATGAATACATCACCATATGTAGATCCTCAGAAATCAGGTCACAGTATTTGGGAAGAATTTTCCATGAGCTTCACACCAGCTGTCAGGGAGGTGGTGGAATTTGCAAAGCGTATTCCAGGATTCAAAGATCTATCCCAGCATGACCAGGTCAGCCTGCTCAAGGCCGGCACCTTTGAGGTATGAACCAAATACAATGCAATGTT

Associated Phenotype:

Not determined