ZMP
pcgf5b
Ensembl ID:
ZFIN ID:
Description:
Polycomb group RING finger protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q1JPS1]
Human Orthologue:
PCGF5
Human Description:
polycomb group ring finger 5 [Source:HGNC Symbol;Acc:28264]
Mouse Orthologue:
Pcgf5
Mouse Description:
polycomb group ring finger 5 Gene [Source:MGI Symbol;Acc:MGI:1923505]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa5852 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa5852
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000086211 | Essential Splice Site | 70 | 232 | 3 | 9 |
Genomic Location (Zv9):
Chromosome 12 (position 17496312)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 12 | 16376022 |
| GRCz11 | 12 | 16424832 |
KASP Assay ID:
554-3927.1 (used for ordering genotyping assays)
KASP Sequence:
CCAAAATGTGGTATCCAGGTTCATGAAACAAATCCCTTGGAGATGTTAAG[G/A]TAAACCACACTCATATAACATCTTACTACTGAGCTAAACCTTCAACCAAT
Long Flanking Sequence:
ATAATCATATGATATTGTTTAGTTAATGCAACATTAATTAGACAACAAAAATTTGTTACAATAAGCCCTAATGTACTGACAAAAAACAAACAAAAATAATGTTTCAATGAAAACCCATAAAATTCTAATAATGTTATTTGTCTCACTGTAAATTATAAAGTGACTTTTTTTTATTTTATTTTTTTTCTATACTATCATCAATTGTAAATTCAATGAAATACTCAGTTAGATATATTACAGGTTTTTAATCATACTAAAAAAGACTAAATAATATTTTCACTGTAGCAGTTGTACATTCTTTTACAGTAAAATAATAATCATCAAATTTTTACAGTTTGCTGTTTCTGGGAAGCACTGCTGTTATTTGATTTTTTTCTTTTTCTCTGTTCTTGCTTCTGAACAGTTTGTAAAAGCTGTATTGTCCAGCATTTCGAGGACAGCAACGATTGCCCAAAATGTGGTATCCAGGTTCATGAAACAAATCCCTTGGAGATGTTAAG[G/A]TAAACCACACTCATATAACATCTTACTACTGAGCTAAACCTTCAACCAATCTGCTTCACATGGTTTGGGATCTGATTCAGTACAGCAGTAGAGCACACCACAGTTTAAACCATGATTGGATTAATTCTGGTTAATCTACATAATTGGAAAGAAATCTAGAATACAAGTTAATAGTTTCCCCTAATAGATCTAAGAGATTCTTATAACCACAGTTTCCTGGTTTTAAGAAGCGTTGGGTAATAAAGAGCCAGTAAATTTGATCCTGGTTGGGAAGCATTCCAGGCAGGGCAACAGCCGGACAGTTTTCTGGAGCCAGTGTCAGCTTTAGGACTGACCTTCTGCAGGATTGCCTCTCCACACCAGTGATGCATCTCCACCCTAACACAGGACTCAACCATAACATGATAACAAGAGCTATAGCAGCATTAGCCTCAACTTGCTAACAGATGTGACAGATATATTAGCAATGCTTTGATCATGTGTTATGGTAGCTCACATTA
Associated Phenotype:
Not determined