ZMP

zgc:55557

Ensembl ID:

ENSDARG00000010789

ZFIN IDs:

ZDB-GENE-040426-739, ZDB-GENE-040426-739

Description:

homer protein homolog 3 [Source:RefSeq peptide;Acc:NP_957407]

Human Orthologue:

HOMER3

Human Description:

homer homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:17514]

Mouse Orthologue:

Homer3

Mouse Description:

homer homolog 3 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1347359]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa4410	Essential Splice Site	F2 line generated	Not yet available
sa5839	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa4410

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000102553	None	223	360	7	10
ENSDART00000125563	Essential Splice Site	223	224	None	8

Genomic Location (Zv9):

Chromosome 11 (position 13670723)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	13427546
GRCz11	11	13485205

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GCTCTTCATGATGCTAACAGCAGCATTGAACAATGGAAAAAACAATTAGC[C/T]GAGTATCAAGAAGAAACAGAACGCCTCCGAGAGCAGGTAAGGAACAATAA

Long Flanking Sequence:

AACATACTTCACCAAATAATCACAACATTCAATATGGTAAATGTTTATGGCATCTCAAAATCACATTGTTCAGAAAGTCAACCAGCAAATGGCTTACCTGTCGTTGTTAAACAAGACTTGCTGTTACAATTAAAATGTGTTCAAATTTCAGATCTAACAGGGAACATGAGTAATCTCTTGCACAATCTGTTCATAAAATGTAAAGGTAACACAAAAGAAATGACATTTTAAAACTCAGCCATGTGTGCAGAGTTTGCCATCTGCTGTCTTTGGACTAAAACACTTTCAGGAAATTTGTCTTTGACTCAGCTTCCAGAAGGAAAAATCTGAGTATAACTGAAACCCAGATGCTGTTTTATTATTATTTTTTTTTTCCACAGGTCAATTTGTGAGGTAAACTCAGAGGCCGAGCTGTTTTCTCTTCGAGACAGCAACACTAAGCTGGTAGCAGCTCTTCATGATGCTAACAGCAGCATTGAACAATGGAAAAAACAATTAGC[C/T]GAGTATCAAGAAGAAACAGAACGCCTCCGAGAGCAGGTAAGGAACAATAATTGCTCCTAGTCGACATTTATAGTACTGCATTCGGATTAGTTTTACTTTCATTTTCTCTCATTGTACGGTCGAGATTAACACACATGTGATTTAAATGTTTAAATATATGTCCGTAAGTGCTTTATTCGTAGTAATTATTATCAGTTTTTACCACTTGTATTTTGTTGTGCAAACACTTCTATATGGCTTACATGTTATGCTGGTGGTGTAACAAATATGAAACCTGAAATATGAAACCCCCCCCCCCCCCTTGTTTTAGTTTTGCAAAAAAAGAAAGATATTGAGTAGAACAATTGCCAGTAAAGTCACTTAAGTTACCCAAACTGCGATCTGGCTTTCTGCTGTTCTTACGTTTGTACAATTGTTTGGGACAGAATAATAATTATTTTGCCTTTTATTTGTTATATTTTCCTAGCAATTTAAACTCTCCTTTCAATATGTACAATAAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa5839

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000102553	Nonsense	351	360	10	10
ENSDART00000125563	None	None	224	None	8

Genomic Location (Zv9):

Chromosome 11 (position 13688775)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	13445598
GRCz11	11	13503257

KASP Assay ID:

554-3696.1 (used for ordering genotyping assays)

KASP Sequence:

AAAAGGCYATTGAAACACTAGATGTCAAAATCTATGACTTRAATGACCTT[C/T]GACAAAACCTGGCCAAGCTCCTGGACAAATGACCACTACATTTGGACAAA

Long Flanking Sequence:

TCAAAAACAACAACCAATATTGCATATCTATAATTTATATAATTAAACAATACTTTCACTATAACGTAAATTAGAAGTGTAATAGAAAAAATATATATTTTTGCGCCATTTTGAATTTTACTCGAATACAAATACAAATACTTTTCCCCCCTCAACAAATACAAATACAGATACAAATACCGGCTGCTCCGCACATCCCTAATAATTATGTTGTGTAAATGTCCAAAAGGCATTCAAAACTTTCAGTTTTTAAATTGACAGTGTTTTTTGTGTGTGAAAATGCCCTAAATGTGATTATATTACAGTATACTGACCTCAGAATGAATGTTTGTTTGTTTTGGCATTAGGACTTGGAAGCTAAGAACTCTGAGTTGGAGAAACAAGTTGAAACAGCGGAGAATGCCTTAGCTTCTTCTAAAGAAGCCCAGAGCAGGGCAGAAACGGCGGTGCAAAAGGCCATTGAAACACTAGATGTCAAAATCTATGACTTAAATGACCTT[C/T]GACAAAACCTGGCCAAGCTCCTGGACAAATGACCACTACATTTGGACAAATATTACATGGTAAAACTGCAGTTTTGAGGTTGATAAAAACTTTACTGGAATCTTCCCCAGCTGCACAAGTGCACAACGATTCATCATGGTACTAGACTGGTAAAAAAAAACTCAAGACGTGAATAAGTAGCATGACAAGCTATTTAGGAGAATATTTGCACCCACATTCCATATTTGCTTCCCGAGAGCCGAGATTAATGGGTGTAACTAACAAATTTCACATGACGACCAGAGCCTGTTTGCTTAAATTAGTCATGAGGAAAATCATATTGAAATTTCTAAAAGAATTTAAAGCTATAGTTCACCCAAAACTAAAACTTCTGTCATCATTTAGTCATTTGTTTCAAATCTTTATCTCTTCAGCTGAATACATAAGAAAGCTGGAAACCTGAAATCATTGAATTTCAATTTTTTTTTCTGCTATGTAAGTCAATGGTTACAGGTTTTCAG

Associated Phenotype:

Not determined