ZMP
hapln1b
Ensembl ID:
ZFIN ID:
Human Orthologue:
HAPLN1
Human Description:
hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:2380]
Mouse Orthologue:
Hapln1
Mouse Description:
hyaluronan and proteoglycan link protein 1 Gene [Source:MGI Symbol;Acc:MGI:1337006]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa5834 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa41738 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa21814 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa5834
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062631 | Nonsense | 104 | 353 | 2 | 4 |
| ENSDART00000142526 | Nonsense | 104 | 352 | 3 | 5 |
| ENSDART00000146660 | None | None | 40 | None | 3 |
Genomic Location (Zv9):
Chromosome 10 (position 44761190)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 43454778 |
| GRCz10 | KN150172.1 | 33120 |
| GRCz11 | 10 | 43283158 |
| GRCz11 | KN150172.1 | 33120 |
KASP Assay ID:
554-3729.1 (used for ordering genotyping assays)
KASP Sequence:
CTGAAGGAAAYTGAWGTGTTTGTGGCGATGGGCTTCCACAAAAAGAGCTA[C/A]GGTCGATTCCACGGCCGCGTTCACCTTCAGGCTGCCAGCGAGAGCGACGC
Long Flanking Sequence:
TCAGTGTATGTTGAAGACTGGAGGGAATAATAATAGAATAATTATAATAATACTGAAGCACTGTGATGATGGACTGACAGCTCCTGACAACATTTCAGATCTGCAACAATGGAAAGCTGTAAACATGTGCTGCAAACTTCCTTAATGCAAAACCAAAACTCTCTGAAACCCAATTTACCTATTTAAATAAGTTATAATAATTTCATTTTCACTTATTTCAAGTTATTAAATGTAGTCATCATTTTTTTTTACAGTCTACTTCTGTCACTAAGTTTCTGTTTTATTGGGTTTTTAGAAAACGGCCCCCGACTCTCAGTCGACACAGCACAACCCAAAGTGATCTCTCAGCGCGGAGGCAACGCCACACTGCCATGCAAGTTCAATCGGGATTCCTCGCTTCCCCCAAATCCCAAGCTGAGGATTAAATGGACTAAACTGACCTCAGACTACCTGAAGGAAATTGATGTGTTTGTGGCGATGGGCTTCCACAAAAAGAGCTA[C/A]GGTCGATTCCACGGCCGCGTTCACCTTCAGGCTGCCAGCGAGAGCGACGCCACACTGGTCATCACAGAGATCACCCTGGAGGATTACGGGAAATACAAGTGTGAAGTCATCGATGGCTTGGAGGACGATACGGCAGTGGTTTCTCTTGACCTACAAGGTAAAGCATGTTTATGTTGGTTGTATACTGTATGTGGTGGGGTTTCCATCAATTGCAAGTAAAATGTCAATCTGGCAACATGTCTATGCAGTATCATGCTACATTCACACAGAGGGCCCTATCATACACCCGGCGCAGTGTGGCGCAAGGCGTGGCGCAGTAGTCTTTTGGTATTTTAAGCTTGGTGCAAGAGTGGTTTTGAGGCGTTGCGCTACGCTGTTTAAATAGCAAATGCATTAGCGCTCATATGTGCGCTCATAGGCGTTCTGGTCTAAAAAGGAAGGTGTTCTGAGGCGGGCCGCTGGCGCGTTGCTATTTTTAAAAACTATAATAGATTTTTCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41738
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062631 | Nonsense | 144 | 353 | 2 | 4 |
| ENSDART00000142526 | Nonsense | 144 | 352 | 3 | 5 |
| ENSDART00000146660 | None | None | 40 | None | 3 |
Genomic Location (Zv9):
Chromosome 10 (position 44761071)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 43454659 |
| GRCz10 | KN150172.1 | 33001 |
| GRCz11 | 10 | 43283039 |
| GRCz11 | KN150172.1 | 33001 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATCACCCTGGAGGATTACGGGAAATACAAGTGTGAAGTCATCGATGGCT[T/A]GGAGGACGATACGGCAGTGGTTTCTCTTGACCTACAAGGTAAAGCATGTT
Long Flanking Sequence:
TAAACATGTGCTGCAAACTTCCTTAATGCAAAACCAAAACTCTCTGAAACCCAATTTACCTATTTAAATAAGTTATAATAATTTCATTTTCACTTATTTCAAGTTATTAAATGTAGTCATCATTTTTTTTTACAGTCTACTTCTGTCACTAAGTTTCTGTTTTATTGGGTTTTTAGAAAACGGCCCCCGACTCTCAGTCGACACAGCACAACCCAAAGTGATCTCTCAGCGCGGAGGCAACGCCACACTGCCATGCAAGTTCAATCGGGATTCCTCGCTTCCCCCAAATCCCAAGCTGAGGATTAAATGGACTAAACTGACCTCAGACTACCTGAAGGAAATTGATGTGTTTGTGGCGATGGGCTTCCACAAAAAGAGCTACGGTCGATTCCACGGCCGCGTTCACCTTCAGGCTGCCAGCGAGAGCGACGCCACACTGGTCATCACAGAGATCACCCTGGAGGATTACGGGAAATACAAGTGTGAAGTCATCGATGGCT[T/A]GGAGGACGATACGGCAGTGGTTTCTCTTGACCTACAAGGTAAAGCATGTTTATGTTGGTTGTATACTGTATGTGGTGGGGTTTCCATCAATTGCAAGTAAAATGTCAATCTGGCAACATGTCTATGCAGTATCATGCTACATTCACACAGAGGGCCCTATCATACACCCGGCGCAGTGTGGCGCAAGGCGTGGCGCAGTAGTCTTTTGGTATTTTAAGCTTGGTGCAAGAGTGGTTTTGAGGCGTTGCGCTACGCTGTTTAAATAGCAAATGCATTAGCGCTCATATGTGCGCTCATAGGCGTTCTGGTCTAAAAAGGAAGGTGTTCTGAGGCGGGCCGCTGGCGCGTTGCTATTTTTAAAAACTATAATAGATTTTTCATTAGACCAAAACAAACCCGGTCTAAACTCCAGCGCAGAGTTGCACCGCTTACACACTGCTTAATACACACAAGAGAGCAATAGGCAAATATCTTTACATATGAAAAAATGTAAATATTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21814
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062631 | Nonsense | 233 | 353 | 3 | 4 |
| ENSDART00000142526 | Nonsense | 233 | 352 | 4 | 5 |
| ENSDART00000146660 | None | None | 40 | None | 3 |
Genomic Location (Zv9):
Chromosome 10 (position 44756067)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 43449655 |
| GRCz10 | KN150172.1 | 28173 |
| GRCz11 | 10 | 43278035 |
| GRCz11 | KN150172.1 | 28173 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCCCATCACCAAACCCAGAGAGCCATGTGGAGGCAAAAACACCATTCCC[G/T]GAGTCAGGAACTATGGGATACGAGACAAGCAAAAAGAACAATACGATGTC
Long Flanking Sequence:
GGTTTATCAATTTCATTGCAGTCGTGAAATCAACATAACATCAACATATCTGGCCCAGTTCAGGCTGTGTTATGGGTTATTAACTTGGCTGAGACTTGGCCCAGGTTTGGCCCTTGTCTGGAAGCCAGACTTGGTCCAGTCATGTACCGTAATTCACTGCGGCATGTGGGCCAAGCAACAGCTGGTTGTGTGGGCCAGAGATATTTTGCTATGTGGGCTATATCATGAAATCTCCCAGCTCTACTTTTATACCAGATCTTCTGCTTTCCACAGGTATCGTTTTTCCATATTTCCCAAGACTGGGTCGATACAACCTGAACTTCCTTGAGGCTGAAAAAGCTTGCCGAGACCAAGACGCCATTGTGGCATCCTTTGAGCAGCTGTACGACGCCTGGAGAGACGGTTTGGATTGGTGCAATGCAGGCTGGCTCAGTGACGGATCAGTACAATACCCCATCACCAAACCCAGAGAGCCATGTGGAGGCAAAAACACCATTCCC[G/T]GAGTCAGGAACTATGGGATACGAGACAAGCAAAAAGAACAATACGATGTCTTCTGTTTCACCTCCAACTACAAAGGTTTGTCTTCCTCACAGTTCAATTAAAGGCCATTTGAAATAGGCTGGCTACAAGGGATTAGTGTTGTCACAATACTGGAATTTGATAGCAATCGATACTAAAATTTTAAAAACGTCCATTTCCTGCTAACATTTGAGCACTGTTGAGCGCGTTCTTAAACAGCACTGATTTGCCCTTGTGTTCACATGCTCAACAGAAATGACTGTGATTGGCCGTAAAGGTCATCGGTTCACCAAACTCACAGCCGTTTACACTGCCGAGTGTAGCTACAGATACAGGGACACCTGAGCGTTTTAAAGCTGTGGAGATCAGCTGGTCTGTTTAAAAATATACATACGAGTGATCTGCTGATGAATCAACTGATCATCACAGCTTTAAAAAAAAATTTTGATTTTACTTCTCAGCAAAATAATTCTTGTATTAAA
Associated Phenotype:
Not determined