ZMP
si:dkey-22i16.2
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC100001558 [Source:RefSeq peptide;Acc:NP_001139095]
Human Orthologue:
CNGA1
Human Description:
cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148]
Mouse Orthologue:
Cnga1
Mouse Description:
cyclic nucleotide gated channel alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88436]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14137 | Essential Splice Site | Available for shipment | Available now |
| sa18298 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14137
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048225 | Essential Splice Site | 10 | 547 | None | 3 |
| ENSDART00000134649 | Essential Splice Site | 160 | 697 | None | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 44279224)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 43195540 |
| GRCz11 | 1 | 43896704 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGG[T/C]AATAATCTGATGTTCATAAGATGAAGAACAYAAATAGAATACAWAAAAGA
Long Flanking Sequence:
GAAAAAAGAGAAAAAAGAAAAGAAGGAGTACGTAGAATACCTGAACAAATCAGTCTATAAACAATGTCCAAATGTTTTATGGTATTAACCTGTGTGTCATCCTGAAGGAAAAAGGAAAAGAAAGAGAAGAAAGAAAAGAAGGAGAAGAATCAAAAGAACGAGAAGCAAAAAGATAATGAGAAAGAAAAGGAAAAAGAAAAAGAGAAGGAGAAGGAAAAAGAAAAGGAGAAGGAAAAAGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAAAGGAAGGGTTGGTCTCATGCTTTTTATTAGCCGTTTCTAATCTGTGATCATCAAAAGTTCAAAGCAATCACCGTTGATTATTTCTCATGTCAACTTCATTTTCTCCAGGCCCAAGGAGGTGTTTGTGATTAACCCCGCGGGACTTCTGTACTATCAGTGGCTGCTCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGG[T/C]AATAATCTGATGTTCATAAGATGAAGAACACAAATAGAATACATAAAAGAATCTCCTTTACTCCCTTCAACCCATAAGCTAATAAATGCATCCATACCAGACAGAGCAGATGCATTTTAAATACTCTGGAGTGTATTCATATGATGTCTGTTCACACAGAGCTTGTTTTGAGGAGCTTCAGCATGAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTACTTGGCTGATATGGCATTCAGAGCACGAACAGGTACTGTACATCACTTGTTATTTCAGATGTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18298
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048225 | Nonsense | 35 | 547 | 2 | 3 |
| ENSDART00000134649 | Nonsense | 185 | 697 | 6 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 44278989)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 43195305 |
| GRCz11 | 1 | 43896469 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTA[C/A]TTGGCTGAYATGGCATTCRGAGCACGAACAGRTACTRTACRTCACTTGTT
Long Flanking Sequence:
AAGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAAAGGAAGGGTTGGTCTCATGCTTTTTATTAGCCGTTTCTAATCTGTGATCATCAAAAGTTCAAAGCAATCACCGTTGATTATTTCTCATGTCAACTTCATTTTCTCCAGGCCCAAGGAGGTGTTTGTGATTAACCCCGCGGGACTTCTGTACTATCAGTGGCTGCTCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGGTAATAATCTGATGTTCATAAGATGAAGAACACAAATAGAATACATAAAAGAATCTCCTTTACTCCCTTCAACCCATAAGCTAATAAATGCATCCATACCAGACAGAGCAGATGCATTTTAAATACTCTGGAGTGTATTCATATGATGTCTGTTCACACAGAGCTTGTTTTGAGGAGCTTCAGCATGAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTA[C/A]TTGGCTGATATGGCATTCAGAGCACGAACAGGTACTGTACATCACTTGTTATTTCAGATGTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATTATTTAATTTTAAGACTTTTAAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAG
Associated Phenotype:
Not determined