Busch Lab

ZMP

si:ch211-248g20.5

Ensembl ID:
ENSDARG00000063558
ZFIN ID:
ZDB-GENE-091204-478
Description:
Novel protein similar to mouse and human Rho guanine nucleotide exchange factor (GEF) 17 (ARHGEF17)
Human Orthologue:
ARHGEF17
Human Description:
Rho guanine nucleotide exchange factor (GEF) 17 [Source:HGNC Symbol;Acc:21726]
Mouse Orthologue:
Arhgef17
Mouse Description:
Rho guanine nucleotide exchange factor (GEF) 17 Gene [Source:MGI Symbol;Acc:MGI:2673002]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa11001 Nonsense Available for shipment Available now
sa9488 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa11001
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000092977 Nonsense 89 1035 3 20
ENSDART00000144057 Nonsense 28 991 2 19
Genomic Location (Zv9):
Chromosome 18 (position 2227652)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 2753392
GRCz11 18 2721599
KASP Assay ID:
2261-1696.1 (used for ordering genotyping assays)
KASP Sequence:
AAATGCMGGTTTGTTTKAGATCTGTCTTTGTGTTTTTGGGTGCAGGGCTA[C/A]ATGAAGCCGCTGAAGCATCCAGAAAACCCGCCTYTGTGTGACCCGTCACT
Long Flanking Sequence:
AATATATTATTAATATTAATAACTGTTCTTATATATACTAATATTCAATTTTATTTGATTTTATATGAAGGTAAATCATTTGTAATGGACATTTGATGTCATTTATTGATTGTTAGGAAAATTATTGTTCAGAAATCCATGTTTTGTGTCAGTAAAGTCGGAGCAGAATGTTTGTTAGCATTTGATGCGACACAGTTTACATCCCAGAGGAAGAGTCAGGCATTTCCTTTAATTACAGTCTGTCCCTAACTACATGCGCACACACGCATTCTCTCATTTACTCATGCATATTCACTGTTATTGCATGCATATTGATTGATATGTATTAATGCATATTCATCTTTATTTTTAGTGCATTCAGTTCTCAGCCTAAGAAAATGTGTGAATGTAAAAATGTGTCAGATGTGCACATTTCAGTGATGCATTTATGGTTTCAGCAATAAATTGCATAAATGCAGGTTTGTTTTAGATCTGTCTTTGTGTTTTTGGGTGCAGGGCTA[C/A]ATGAAGCCGCTGAAGCATCCAGAAAACCCGCCTTTGTGTGACCCGTCACTTGTGGACGAGATGTTTTACCAGATCCCAGAAATCCTGGAGCACCATGAGCAGTTTCTGGAGCAGGTGCTGGACTGTGTTCACCAGTGGCACGACAAGCAGACCATCGGACACGTGCTCATTCAGTCGGTGAGACTCGTATTCCTGTTTCTGTACTGTTTACATTCATGCTGCATTGGAGAAATCAGAGCTGATGGTGAAACAAAGTCATATATGTTTAAGGTTTAAAGTCACAGTGCATATAAATATCACGTCATGTTCTTGCTAAACACCAATTTCACACTAAAAATATTCTTGCTGACTTATTTTTTTTTCTAAAAATATTTAGTTAGACATTGCAAAACTTAAAAAATTGCATATTGCAAATTAATATTTTTATTGTAAATGTAATAAAGACATACAAACATACCAAATAAAAACACACAATAAAAAATACAAATAAAACAGGAATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9488
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000092977 Nonsense 192 1035 5 20
ENSDART00000144057 Nonsense 131 991 4 19
Genomic Location (Zv9):
Chromosome 18 (position 2219263)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 2745003
GRCz11 18 2713210
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTTAATTGTCTGTAATTGTTTGTCTTTCCTCTTCAGCAAAGCATGCGT[G/T]AGAACAGAGARAAACAAGCTCTGGGTGACCTGATGAYAAAGCCGGTTCAG
Long Flanking Sequence:
GGGGGAAACCAGAGCACCTGGAGAAAACCCACGCGAAGGCAGGGAGAACATGCAAACTCCACACAGAAACGCCAACTGAGCCGAGGTTTGACCCAGCGACCTTCTTGCTGTGAGACGACAGCACTACCTACTGCACCACTGGCTCGCCCGTATTTAAACCCAGTATTTAAAAAGGTCCAGGTTTTTTTTTGTTTTTGTTTAGCTGCCAAACCAGTGATTGTAATTTTTTGTTATTTTATTAAGTTTTTCAGATAATTTATTTTATTTTATTTTTATTTCAATAAACAAAATATTTTTTTCACAGTAGCAACTTCTCATTTATCTGCTTTTAATGTTTGTGCTGAATCATAAAAGGTTTGAGAAATGAATGCGCTGATTTCTGCCCTCTAGTGGTGAAAACTCAAACTGATCTGAGCTCTCCAGTACAGGGCTGTTATGAACTGTTGTGTTTTGTTAATTGTCTGTAATTGTTTGTCTTTCCTCTTCAGCAAAGCATGCGT[G/T]AGAACAGAGAGAAACAAGCTCTGGGTGACCTGATGATAAAGCCGGTTCAGAGAATCCCTCGATACGAGCTGCTGGTCAAGGTGACTCTCACATTATTTCTTAAACTTTTGTATCTTCATGTCTTGATTTTGAAGCAAGGCAGAATAATAAATTCAAATAAAGACATTGAGCTGGCGAATTATTATTATTATTATGATCATTATTATTATAAATAATTAATAAAATAAACAATAAATAATACAGTAAGATATAATAATAAATGTATAATAATAATAATAATAATAAATGTATGATAATAATAATTATAATACTAAATGTATAACAATATTATTAGTAATAATAATAATGATAATAGTAATTATAATAAATGTATAATAATAATAATAACAATAAATGTATGCTCATAATAATAATAATGATAATAATAATAATAATAATAATAATAATAATAATAATAATGATAATAATAATAATAATAATAATAATAATAATAAATGTAT
Associated Phenotype:
Not determined