ZMP
chst1
Ensembl ID:
ZFIN ID:
Description:
Carbohydrate sulfotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6DBY9]
Human Orthologue:
CHST1
Human Description:
carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:HGNC Symbol;Acc:1969]
Mouse Orthologue:
Chst1
Mouse Description:
carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 Gene [Source:MGI Symbol;Acc:MGI:1924219]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45847 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45847
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000125733 | Nonsense | 96 | 420 | 2 | 2 |
| ENSDART00000129105 | Nonsense | 96 | 420 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 25 (position 14279893)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13922816 |
| GRCz11 | 25 | 14019216 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCTCCTCTTTCGTTGGACAGTTGTTCAACCAGCACTCAGATGTGTTCTA[T/A]CTCTTTGAACCACTCTATCATGTCCAAACGACCTTAATCCCTCACCTTTC
Long Flanking Sequence:
GTTTAAATCTTTAAATCCTAAATTTAAAATATGCTTTTTTGTTTCTGGTATTGACTCATTATTATAGCATGTTATATAATGTTATATACAATGCAAATTCATGTTCTGCTTTTTCCTGGTTTTCAAACTCACGCTGAGATCTTTTGTTTTTCAGCTTTGTCTTTGTGGATAGGATCAAATCAGACTGCATCCTCTAAATGAAGTTACCCAGCCATGCAATGTTCCTGGAAGGCTGTGATTCTGCTTGCATTGGTGTCCATAGCGATCCAATACACAGCAATCAGGACTTTCACAGCCAAGCCTTTTCATATTTGCCCTGTTCCTAACCCCCTGAACTGTGGTTTGGGGCAGGATGTGGAGTCGTTCGATCGGATGTGTGATGAGTACCCATATTTTAATTACAATTCCTCAAGGAAGACTCACATCCTCATCTTGGCAACCACTCGCAGCGGCTCCTCTTTCGTTGGACAGTTGTTCAACCAGCACTCAGATGTGTTCTA[T/A]CTCTTTGAACCACTCTATCATGTCCAAACGACCTTAATCCCTCACCTTTCTCCCAGCAGATACGCTGTGGAGCGCCGAGTGATGCTGGGAGCCAGTCGTGACCTTCTTAGAAGCCTGTACAACTGCGACTTGTATTTCCTAGAGAGTTACATCAAACCGCAGCCGGCAAACCACACCACGGATAAACTGTTTCGACGTGGAGCCAGCAAAGCCCTCTGTTCTATGCCGGTTTGTGATGCTTTCAGCCCCAATGATGGCAATATAGAAGAGGGGGATTGTGTTCGGAAGTGTGCCTCTCTTAATTTGACCCTAGCTACCGAATCATGCCGAGAAAGACGGCATGTGGCCATTAAAACGGTGCGTATCCCGGAGGTCAACGATCTTAAGGCACTGATTGAAGACCCTCGGCTTAATTTGAAGGTTATACAGTTGGTAAGGGACCCACGTGGAATATTATCATCGAGGATTGAAACCTTCCGGGACACTTACCGCCTATGGCG
Associated Phenotype:
Not determined