ZMP

rapgef3

Ensembl ID:

ENSDARG00000079291

ZFIN ID:

ZDB-GENE-090312-38

Human Orthologue:

RAPGEF3

Human Description:

Rap guanine nucleotide exchange factor (GEF) 3 [Source:HGNC Symbol;Acc:16629]

Mouse Orthologue:

Rapgef3

Mouse Description:

Rap guanine nucleotide exchange factor (GEF) 3 Gene [Source:MGI Symbol;Acc:MGI:2441741]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa45809	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa44024	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa45809

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000114423	None	None	885	None	28
ENSDART00000142328	Essential Splice Site	351	824	10	25

The following transcripts of ENSDARG00000079291 do not overlap with this mutation:

ENSDART00000139280

Genomic Location (Zv9):

Chromosome 23 (position 33636856)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	33496654
GRCz11	23	33423185

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CATGCCCTGCAGTCAACTGTGTGCTGCCCTCCAGCATCAATATCCTTACA[G/C]TATATTAGTCACTTATATTCTGCTTCATATTGATATTTCTCTACCAGAAC

Long Flanking Sequence:

TATTTGATTTCAAGTGCACTAATTCAATTATGAACAACAGAAATGGAGGACGCCTAACTATAGTTTGAATTATCCAGGTACACGGTAATGTCAGGAACGCCGGAAAAGATCCTGGAGCACATGCTGGAGGCCATAAAACTGGAAACCAACGGAGCTGACTTCATAGGTAAGGCAGATGCATGGTTTGTGAGTGACTTGTATAACAACCTGTTATTATAGTTGTGTACCACAGAAGGTCAGACTGAGGGAGTGACCAAAACATTCCAGCTCATTTGGTCTTGTTTACACATCCATTCAAAAGCAGCAGTCAGATGATTGAGGTTGTTCTGGGCTTCTCCACACAGCTCAGTGATGAAAACAAGTCCCTGTTGATGAAGTTTTAAGAGCTTGTTTTTTTTGTGCTTCTTTAGATCCCTGTGTGACTGACTTTCTCCTAACGCATCCCGTCTTCATGCCCTGCAGTCAACTGTGTGCTGCCCTCCAGCATCAATATCCTTACA[G/C]TATATTAGTCACTTATATTCTGCTTCATATTGATATTTCTCTACCAGAACATTTACATGAACATCAACATTCTCTATTAAAATAATACTCTGATTACAAGGATAGTTCACAAAAAAGACAATTCTGTGATCATTTACTCACCCTTGACTTGTTCCAAACCAGTTAGAGTTTTTGTCTTCTGTTGAACACAAAAGAAGATATTTTGAGGAATGTTGAAAAACGGTCCACTGAAATTCATTGTAGAAAAAAAGTTCTATGGAAGTCAGTGAACATGGTGAACATACCCGACAACACTCCAGTTTTTCTAGAGAGCTAAGAGCTGTTTGTGATTGTTTTGATGTTCCTTAACCTGCTCTTGCACTTACCAAGCGGAGCCGTCTGAAGGCTCAGACCTGGAGAAGGCAGCGTACGCTCTCAACACCAAGCAGAAGGTGGTGAAGCTGGTGTGTCACTGGGTGGCTCTGTTCGCTCTGCTGCTCAGGGACGATCCTGTGGCCTCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa44024

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000114423	Essential Splice Site	736	885	22	28
ENSDART00000142328	Essential Splice Site	675	824	19	25

The following transcripts of ENSDARG00000079291 do not overlap with this mutation:

ENSDART00000139280

Genomic Location (Zv9):

Chromosome 23 (position 33650351)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	33510149
GRCz11	23	33436680

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTTTGGCCTCAGCAACAGTGCAGTGCAGAGGCTCAATAAAACATGGGAG[G/A]TAAGGACGAATGCGCTTTCTTAGGCTATATAATAATCTGCCTTTAATAAT

Long Flanking Sequence:

TAGCTAAAACTAAAAATTTTGCATAATTTTCATAAATGCACATACATTTTATAAAAAAACAAACTTAACAATATTGGAATATAACTAAAATATATATTAAAGAAAAGAAAATAAAGAAAAAAATTATATAAAAGAAAATAAATTAATATTTAAAACTGGTATTTAATATTTGATATTTTGGTATTATCAAAGTAACTGATTTTATAGCTCATATCATTAGTGACCACTAGAGGAAGCTAAATTTTATTTTATTTTTTTTACCTCTGTTCACAGGTCTTGATCATTAATTATGATGTCTCATGTATGACATATAACACATACTACCAATTATTTACAATGAAATAAACTCATATGACTTGTTTGTATTAGACAGTATGAGCTCACGGGCGTCTATTCTGATGTGTTTCAGTTTGAAAGAGCAGAAGAACCTCAACTCTTTTTTCGCAGTAATGTTTGGCCTCAGCAACAGTGCAGTGCAGAGGCTCAATAAAACATGGGAG[G/A]TAAGGACGAATGCGCTTTCTTAGGCTATATAATAATCTGCCTTTAATAATCTACACTACTCCATTTACATTTATTCATTTAGCAGACACGTTTTTCCAAGGCGCCTTACAAATTAGGACATTCCCCAGTTTTAATGTGCTAAATGTTATAAGTAATACTATAAAGATTACCATCATACTTTTCTTTTCTGAAACAGCTTGAATTGAAAAAAGTGCAATGCTAATTCATTTGACTTAATAAAAAAATACATATATTTTGATCTCATTGAACAGAGACTTCCCAATAAAACCAAAAGGATCTACTGTGCATACGAAAGACTGATGGTAAATGTTCACACACACTTTTCAGGGATTGTTCAATATATGTGAATGCTATATATATATATATTAATAATCTGTGTTTTAGGATCCGTCCCGTAACCACAGGGCCTACAGACTGACTATTGCCAAACTCAGCCCTCCATACATTCCCTTCATGCCACTGCTTCTAAAAGGTACAGT

Associated Phenotype:

Not determined