Busch Lab

ZMP

ccr6a

Ensembl ID:
ENSDARG00000087474
ZFIN ID:
ZDB-GENE-040625-126
Description:
chemokine receptor 6a [Source:RefSeq peptide;Acc:NP_001093461]
Human Orthologue:
CCR6
Human Description:
chemokine (C-C motif) receptor 6 [Source:HGNC Symbol;Acc:1607]
Mouse Orthologue:
Ccr6
Mouse Description:
chemokine (C-C motif) receptor 6 Gene [Source:MGI Symbol;Acc:MGI:1333797]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa37065 Nonsense Mutation detected in F1 DNA Not yet available
sa13724 Nonsense Available for shipment Available now
sa37066 Nonsense Mutation detected in F1 DNA Not yet available
sa45705 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa37065
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122256 Nonsense 28 375 2 2
Genomic Location (Zv9):
Chromosome 20 (position 30639381)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 30710594
GRCz11 20 30613473
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGGTGATTATTATGAAGGAGCTGTGGAGCCGTGTTCTGTGGAGAGCAGG[C/T]AGAAGCTTGAGAACTTCCTCCGCTTGTTTATTCATCCAATCATTTGTGTG
Long Flanking Sequence:
CCTGAAGGGTCCTTATTGATAACTTAAAGCAGGGGTCACCAATCCTGTTCCTAGAGATCTACCTTCCTGCAGGTTTCAGTTGCAACCCTGACCAAACACACCTGTCTGTAATTATCAAGAGCTTCTTCATGTCCTAATTAATTGGTTCAGGTGTGTTTAATCAGGGATGGAGCTGAATTCTGCAGAAAGGTAACTCTCCAGGAACAGGGTTGGTGACCCCTTTAACTTAAAGGAACATACTAGTAAAGTACAAACATGAAAAGTACAACCCTAGTGACAACTTTTGTACCTTTATTTCTGGAAGTGTTGAATAAACTTTGCTCTGCTTTAGATTTCAGTTAGTCCTCTTCATCTTGACTTGAACTCTGCCTTTCAAGTAATAATCTTACTGATGTTCCTGTTCTTTCTTTATAGAGAAAATGATTAATGATTCCTCTGAAAACTACAACTACGGTGATTATTATGAAGGAGCTGTGGAGCCGTGTTCTGTGGAGAGCAGG[C/T]AGAAGCTTGAGAACTTCCTCCGCTTGTTTATTCATCCAATCATTTGTGTGGCTGGTTTCATCGGCAACAGTCTTGTGATTGTAACGTACGCCCTCTACAAGCGAACCAAGTCCATGACTGACGTGTATCTGCTGAATGTGGCCATCGCTGACATCCTGTTTGTGGTGGCTCTGCCTTTAATCATCTACAGCGAGCAGCACAGTTGGGCCATGGGGAACATGTCCTGCAAGCTTCTGCGTGGCATCTATAGCGTCAATCTGTACAGCGGGATGTTACTTCTGGCTTGCATCAGTGGAGATCGATACCTTGCCATTGTGCAAGCCCGTCGCTCGTTCCGGCTGCGTTCAAGCACTCTTCTTTACAGCCATTTAGTTTGTGCAGCCGTCTGGTTGCTGGCCTTGCTTCTGTCCCTTCCCACCTTCATCTTTTATGAGCGTTACGAAAATGGTCTGACTGAATCTACCTTCCTATTCAACAATAATACCATCATGGAAGAAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13724
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122256 Nonsense 70 375 2 2
Genomic Location (Zv9):
Chromosome 20 (position 30639509)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 30710722
GRCz11 20 30613601
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGTAACGTACGCCCTCTACAAGCGAACCAAGTCCATGACTGACGTGTA[T/A]CTGCTGAATGTGGCCATCGCTGACATCCTGTTTGTGGTGGCTCTGCCTTT
Long Flanking Sequence:
ATGTCCTAATTAATTGGTTCAGGTGTGTTTAATCAGGGATGGAGCTGAATTCTGCAGAAAGGTAACTCTCCAGGAACAGGGTTGGTGACCCCTTTAACTTAAAGGAACATACTAGTAAAGTACAAACATGAAAAGTACAACCCTAGTGACAACTTTTGTACCTTTATTTCTGGAAGTGTTGAATAAACTTTGCTCTGCTTTAGATTTCAGTTAGTCCTCTTCATCTTGACTTGAACTCTGCCTTTCAAGTAATAATCTTACTGATGTTCCTGTTCTTTCTTTATAGAGAAAATGATTAATGATTCCTCTGAAAACTACAACTACGGTGATTATTATGAAGGAGCTGTGGAGCCGTGTTCTGTGGAGAGCAGGCAGAAGCTTGAGAACTTCCTCCGCTTGTTTATTCATCCAATCATTTGTGTGGCTGGTTTCATCGGCAACAGTCTTGTGATTGTAACGTACGCCCTCTACAAGCGAACCAAGTCCATGACTGACGTGTA[T/A]CTGCTGAATGTGGCCATCGCTGACATCCTGTTTGTGGTGGCTCTGCCTTTAATCATCTACAGCGAGCAGCACAGTTGGGCCATGGGGAACATGTCCTGCAAGCTTCTGCGTGGCATCTATAGCGTCAATCTGTACAGCGGGATGTTACTTCTGGCTTGCATCAGTGGAGATCGATACCTTGCCATTGTGCAAGCCCGTCGCTCGTTCCGGCTGCGTTCAAGCACTCTTCTTTACAGCCATTTAGTTTGTGCAGCCGTCTGGTTGCTGGCCTTGCTTCTGTCCCTTCCCACCTTCATCTTTTATGAGCGTTACGAAAATGGTCTGACTGAATCTACCTTCCTATTCAACAATAATACCATCATGGAAGAAATTCAGTATGTCTGCTCTTTCAAGTTTGAGTCGAATGAAACAGCGCGTATGATGAAAACCATCGTGCCCAGCTCTCAGGTGGCAGTGGGTTTCTTTTTGCCTTTGCTCATAATGGGATTCTGTTACTCCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37066
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122256 Nonsense 284 375 2 2
Genomic Location (Zv9):
Chromosome 20 (position 30640149)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 30711362
GRCz11 20 30614241
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCATATGCCTTATAACCTTGTGCTGTTGTACCATACCATCAATTTATTT[G/T]AACAGCAGGAATGCAGCCATGAGGAGGCCGTCGCGTTGACCATGACCATC
Long Flanking Sequence:
GGATGTTACTTCTGGCTTGCATCAGTGGAGATCGATACCTTGCCATTGTGCAAGCCCGTCGCTCGTTCCGGCTGCGTTCAAGCACTCTTCTTTACAGCCATTTAGTTTGTGCAGCCGTCTGGTTGCTGGCCTTGCTTCTGTCCCTTCCCACCTTCATCTTTTATGAGCGTTACGAAAATGGTCTGACTGAATCTACCTTCCTATTCAACAATAATACCATCATGGAAGAAATTCAGTATGTCTGCTCTTTCAAGTTTGAGTCGAATGAAACAGCGCGTATGATGAAAACCATCGTGCCCAGCTCTCAGGTGGCAGTGGGTTTCTTTTTGCCTTTGCTCATAATGGGATTCTGTTACTCCAGCGTCATTGTCACCCTTCTTCGGGCCAAGAACTTTCAGAGGCACAAAGCAGTGCGTGTAGTGCTCACCGTGGTCCTTGTGTTTGTGGTCTGCCATATGCCTTATAACCTTGTGCTGTTGTACCATACCATCAATTTATTT[G/T]AACAGCAGGAATGCAGCCATGAGGAGGCCGTCGCGTTGACCATGACCATCACAGAAAGTTTGGCATACCTGCACTCTTGCCTCAATCCTCTGCTGTATGCCTTCATCGGGGTCAATTTCAGAAACCACTTCCGGAAGATCCTACGGGACATTTGGTGTTTGGGGAAGAACTATATGTCGGCAAGGCGGTCATCACGTGTTACCACTGAAATGTACCTTTCGACGCGGCGCTCTATGGATTATTCCAACAATGAAAATGGCACGTCGTTTACCATGTGATTGGATGCCTTTTAATTGACTGAATAACAACGGCTCAGTCATTATTTACTCACCTTCATGCTGGGTCAAATTAGGTCAATTGTTTTGATTGAAATAATATGAGAGGAATTCCCCAGTACTGGGTTGTGGCTAAAAGGGTATCCGCTGCGTAAAACATATCCCAGAGTAGATGGCGGTTCATTCAACTGTGGTGACCCTTAATAAATCAGGGACTAAGCCGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45705
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122256 Nonsense 341 375 2 2
Genomic Location (Zv9):
Chromosome 20 (position 30640322)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 30711535
GRCz11 20 30614414
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACCACTTCCGGAAGATCCTACGGGACATTTGGTGTTTGGGGAAGAACTA[T/A]ATGTCGGCAAGGCGGTCATCACGTGTTACCACTGAAATGTACCTTTCGAC
Long Flanking Sequence:
GAAAATGGTCTGACTGAATCTACCTTCCTATTCAACAATAATACCATCATGGAAGAAATTCAGTATGTCTGCTCTTTCAAGTTTGAGTCGAATGAAACAGCGCGTATGATGAAAACCATCGTGCCCAGCTCTCAGGTGGCAGTGGGTTTCTTTTTGCCTTTGCTCATAATGGGATTCTGTTACTCCAGCGTCATTGTCACCCTTCTTCGGGCCAAGAACTTTCAGAGGCACAAAGCAGTGCGTGTAGTGCTCACCGTGGTCCTTGTGTTTGTGGTCTGCCATATGCCTTATAACCTTGTGCTGTTGTACCATACCATCAATTTATTTGAACAGCAGGAATGCAGCCATGAGGAGGCCGTCGCGTTGACCATGACCATCACAGAAAGTTTGGCATACCTGCACTCTTGCCTCAATCCTCTGCTGTATGCCTTCATCGGGGTCAATTTCAGAAACCACTTCCGGAAGATCCTACGGGACATTTGGTGTTTGGGGAAGAACTA[T/A]ATGTCGGCAAGGCGGTCATCACGTGTTACCACTGAAATGTACCTTTCGACGCGGCGCTCTATGGATTATTCCAACAATGAAAATGGCACGTCGTTTACCATGTGATTGGATGCCTTTTAATTGACTGAATAACAACGGCTCAGTCATTATTTACTCACCTTCATGCTGGGTCAAATTAGGTCAATTGTTTTGATTGAAATAATATGAGAGGAATTCCCCAGTACTGGGTTGTGGCTAAAAGGGTATCCGCTGCGTAAAACATATCCCAGAGTAGATGGCGGTTCATTCAACTGTGGTGACCCTTAATAAATCAGGGACTAAGCCGAAGGAAAATGAATGAATGAGTATGAAAGTAAGTAAATGATGGCTTCTTTTATTGGACGCATGAATTTGAAGGAAACACACGAGTAACGGACCAACAAGGGAAAGTGAAGATCGCATGAACTATTTACAGATGATATCAGTGAGATCTTTTCTTGTATATGTTGTGTTAACCTCTT
Associated Phenotype:
Not determined