ZMP
si:ch211-236p5.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
NLRC5
Human Description:
NLR family, CARD domain containing 5 [Source:HGNC Symbol;Acc:29933]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45594 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45594
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000125728 | Nonsense | 547 | 1020 | 3 | 7 |
| ENSDART00000141987 | Nonsense | 432 | 570 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 17 (position 8138581)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 8141355 |
| GRCz11 | 17 | 8298533 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATATGAAGTCAAGAATAAAGAGTCACTGAAGTTATATCTGAAGGGATA[T/G]AAATGGTACAGCCGAGAAATCTCTCTGTTTGATCTACTTGAAGGCTCCAT
Long Flanking Sequence:
CACATCAGAAGATCCAGAAGCCTCCACATCATGTGTCACATACCCGTCTTCTGCTGGATCTCAGCCACTGTGCTTCAGAAGCTCCTGAATGAAGATGACAGAGCAGAAATCCCTCAAACTCTGACTGAAATGTACATCCACTTCCTGCTGACTCAGATCAACATGAGGAACCAGAAGTATGAAGAGAGAGATCCAGAGAATCTCCTGGAGTCCAGCAGAGAGATGATCGTGAAACTCGCTGAACTGGCTTTCAAACAGCTGATGAAGGGCAATGTGATGTTCTATGAAGAGGACCTGATTGAGAGCGGCATAGATGTCACCAGTGCTGCAGTGTATTCTGGGATTTGCACTGAGATCTTTAAGGAGCAATCTGTGATTCATCAGAGGAAAGTCTACAGCTTCATTCATCTGAGCTTTCAGGAGTTTCTCGCTGCTTTCTTTGTGTTTTACTCATATGAAGTCAAGAATAAAGAGTCACTGAAGTTATATCTGAAGGGATA[T/G]AAATGGTACAGCCGAGAAATCTCTCTGTTTGATCTACTTGAAGGCTCCATTGAAAAATCATTGCAGAGTGAAAATGGACATCTGGATCTTTTCCTGCGGTTTCTGCTGGGAATCTCACAGGACTTTATTCAGAAGCTCTTGCAGGATCTATTGACACACACAGAGAACAGTTCAGAAAGCATTAGAAGAATCACACGGTACATTAAAGATAAAATCAAAGGTGATGAACATCTCTCAGCTGACAGATGCGTCAATCTGTTCCTCTGTCTGCTGGAAATAAATGATCAGACTCTGTACAGAGAGATTCAGAAGTTTGTGAAATCACAGAATTGCTTAGTGGAGAAGCTTTCTCCGTCTCACTGTTCAGCAATCTCCTACATGCTTCAGATATCTGAGGTGGTGCTGGATGAGTTTGATCTGAAGAAATACAACACATCAGATGAGGGTAGAAGGAGACTGTTACCAGCTGTGGTGAACTGCAGAAAAGCTCAGTGAGTATT
Associated Phenotype:
Not determined