Busch Lab

ZMP

clptm1

Ensembl ID:
ENSDARG00000018973
ZFIN ID:
ZDB-GENE-040801-265
Description:
Cleft lip and palate transmembrane protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q6DEL2]
Human Orthologue:
CLPTM1
Human Description:
cleft lip and palate associated transmembrane protein 1 [Source:HGNC Symbol;Acc:2087]
Mouse Orthologue:
Clptm1
Mouse Description:
cleft lip and palate associated transmembrane protein 1 Gene [Source:MGI Symbol;Acc:MGI:1927155]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa13817 Nonsense Available for shipment Available now
sa45533 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa14801 Essential Splice Site Available for shipment Available now
sa17636 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa13817
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000046648 Nonsense 46 631 2 14
Genomic Location (Zv9):
Chromosome 15 (position 16098622)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 17143585
GRCz11 15 17079607
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGTAGCTCAGACAGGTGCAACTGCACAGGACCCCCAACAACAGCAACAA[C/T]AACAGCCCAGTGCCTGGCAGGTGATTAAAGGTGTCCTCTTTAGGTGAGTT
Long Flanking Sequence:
CTGTGTAGCTTCTCTGTAAACTATGGCTTTGTTGCTGCTACATCTAAAAGCATGTGAAAATGCCACATTTCAGACATTTTTACTTCACGCTCGCTTCATAACTTAAGTCAAGTGTTTAAGTCTTTCTGTGAGAATATTCCATATTTATGTGTTTATTAATCAGTGTAAGCAGTTAAATCTAGCAACCACCATAGGGATTTCATGTAGTCTTCATGAGTATTTGGAGTTTCATGTGAGAGCTTTCTGGGCTTTGAAGGAGATTTACTACTGATCTTCCGTGAAAAGATGTTCATAAAAACCACAGCATTTGCTTAATTGCAGTTGCAATTTCTTTCCATTTTGTTGTGCTGCCCTTGTACAATGTGTACTAAACATTTTGCATGTATATTTAATTGTTTATCACTAAATGTTTTGTGCAGGTGAGCAGTAATGGGGCAGCTGCCTCTGGTCAGGTAGCTCAGACAGGTGCAACTGCACAGGACCCCCAACAACAGCAACAA[C/T]AACAGCCCAGTGCCTGGCAGGTGATTAAAGGTGTCCTCTTTAGGTGAGTTCAGATCTTGCAAATTTAAATTATGTGTAACTCATAACTATTTTCCCCCTGTTGTTCTCACTTTAAAGCTATAGTATGTAACTCACATCAAATCACTCAAATCATTTATATTGTCACATCATCAGCAGCATGTTTACTACGAGGAGTAAAAACGCTTAGGTGCTGACAGTGCAAACTGTAACTCGCTCTCTAGCAGTTAATAAAACAACAATTCATGTCTTTTTAAGTACTACTGTTTATTAAGTTGTAGGGATGAATTGAACACAGGTTCATAGCTACTCCACAGTATGGATTGAGCCAACAGATCTAAAATAATTTGAATATTAATACTTATTTTATTATTTTTGAATGTAAATTTTGTAGCCTTTTAGTGGTTTGTTGTGGGTTTGTTGTGATTTTAGAAAGTATATGCTAACATTTTAGATTATTAATGGTGATTGAGCTGTGTTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45533
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000046648 Essential Splice Site 101 631 3 14
Genomic Location (Zv9):
Chromosome 15 (position 16100249)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 17145212
GRCz11 15 17081234
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTCCGCGAGTGCCCAGCCGAAACCTCTTCCCTAAGGACACTCTTATGG[T/A]ATTCGTAGCTTTTCATGTATAACAACATAAGCAGAATATATAATCAAGCA
Long Flanking Sequence:
AACAACCCCAGTGTGAGTCCTGAGGGCTGCATTACTCGATGGACATCCCCTGAGGGGAAAACAACTAAACTCCAGAGCTGTTCTGACTGCTCTAATTGATGTCACGGGATTTGCATTCCTAATATTTCACACTTACGCAATATTTAAAGTGTATTGTCACAGTTACAGCATTTACCTTCTCCAGAGGTGTTTCTCAAAAATTGACTTTACTCTTATTTAAAGGGGCTGAAATAATATTAATATATATATTTTTTTTACTCTCACGTTATAGCTGATAGTTTAAAATAGCAATGTTGCATCATGAGATCTGGGAATACTCTTCTTAAACATCATAGGACTGACGTCTAAAGTTAACCCCCTCATGTTTTTACCCAGGATTTTTATCATCTGGGCTATTAGCAGCTGGTTTCGCAGAGGTCCATCAACCCCAGATCCCAACACTCCTGCTGGAGCTCCGCGAGTGCCCAGCCGAAACCTCTTCCCTAAGGACACTCTTATGG[T/A]ATTCGTAGCTTTTCATGTATAACAACATAAGCAGAATATATAATCAAGCACATAATGAAATTCAAAGTAGGTTCATGTTTGATAACCATCACCTGTCTGTTTACAGGATTTATATGTGTATATCTCAGAGAGCGAGATATTTACAGATTTTAACAATACAGAAGAACTGTTCTGGTACCAGCAAGATCTGGTTTATGGAGAGTGGACCACAGGGGACTCGGGAGATGGCTGCTATGAATATTACAAAGAGCTGGACCTCTCTGAGGTGAGACATGTTTGCTTGCTGTGAATGTGATGGGTCTGAGACATGCACAGTTTGAAAATGTATGAAGGCGTGTAATTGACTATTTATAACCACTTTGCACGGCGGTATTGTTTTGGTGCTTTTCAGTACATGTGCCTACTAAGCTTTGACGCACACTAGAACATGGTAAAACACAAGTATGTTAATAGCTTCACAACTCTTTTAGCATTTAATAAGATGTATCACTTTAAAAATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14801
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000046648 Essential Splice Site 376 631 9 14
Genomic Location (Zv9):
Chromosome 15 (position 16109798)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 17154761
GRCz11 15 17090783
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTAGYTTCCATCGTCCACAGCATTTTTGAGWTCCWGGCCTTTAAGAATGG[T/A]AAATAAATACTGTTTTGATTATTTGAGWCTTGTGGCTTCTGGGATCTGAG
Long Flanking Sequence:
GAAACGCTGCTTTATTCGCACGTCTTTTATACGATAATCCAGTTTTGTGCATAAAGTTAATTTGCATTTTTGGATGGAAACATACAGTAGCTAGTGGTTCCCAACCTTGTTCCTGGAGGCACACAAATAGTCCACATTTAAAACTTTTCCTAATCAAAGACGCCTGAATCAGCTCATCACATCATTAGAAGAGTCTACAAACCAAAAATGAATGGGTCCTCTGAAGGAGACATCCAAAACATGTACTGTTGGTGTGCCTTCAGGAACAGGGTTGGGAAACACTGCATTATGCTACAAATTAGACTCATGAATAGGTGAAATAATGTTAACGGTTCAACAAGCACAGTATTAAATGTCATTTACAAGTCTTTTTGTGTTTATATGCTTGCTTGTTTCTTTTAACAGGTGGCTCTGCTTGAAACCAACCCCTACCTCCTAGGCCTGACCATTGTAGTTTCCATCGTCCACAGCATTTTTGAGTTCCTGGCCTTTAAGAATGG[T/A]AAATAAATACTGTTTTGATTATTTGAGTCTTGTGGCTTCTGGGATCTGAGCAGTACCGTCTCATTTTATCTTCTCTGCAGATATCCAGTTCTGGAACAGCCGTCAGTCTCTGGAGGGACTCTCCGTACGCTCCATCATATTCGGAGTGTTCCAGTCTCTTGTAGTGCTGCTTTATATCCTGGACAACGAGACCAACTTTGTGGTCCAGGTCAGCGTATTCATTGGCCTGCTCATCGACTTCTGGAAGATCACCAAAGTCATGGACGTCAGGGTGAGATGAAGCCACTGCCAGACATTTTAGACCGCTTAAATGGCTAGGGCTAAATTGATGTTCATTCTTTTCTTTTCTTTTTTTTTCTAGCTGGACAGAGAGAACAGGATTGCTGGAATTGTCCCAAGATTAGTATTCAAAGACAAGTCCACATATGTGGAGTCTTCAACCAAAATCTATGATGATGTAAGAGTCACTTTTAAGCTGCATTAGAGCAAATTCAGATGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17636
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000046648 Nonsense 493 631 12 14
Genomic Location (Zv9):
Chromosome 15 (position 16110402)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 17155365
GRCz11 15 17091387
KASP Assay ID:
2260-8276.1 (used for ordering genotyping assays)
KASP Sequence:
CCTGTCCTGGCTGTTGTACCCTCTRTTTGGATGCTATGCAGTGTATAGCT[T/A]ATTATATGTGGAACACAAGGGCTGGTACTCRTGGGTGCTCAGTATGCTTT
Long Flanking Sequence:
CAGTCTCTGGAGGGACTCTCCGTACGCTCCATCATATTCGGAGTGTTCCAGTCTCTTGTAGTGCTGCTTTATATCCTGGACAACGAGACCAACTTTGTGGTCCAGGTCAGCGTATTCATTGGCCTGCTCATCGACTTCTGGAAGATCACCAAAGTCATGGACGTCAGGGTGAGATGAAGCCACTGCCAGACATTTTAGACCGCTTAAATGGCTAGGGCTAAATTGATGTTCATTCTTTTCTTTTCTTTTTTTTTCTAGCTGGACAGAGAGAACAGGATTGCTGGAATTGTCCCAAGATTAGTATTCAAAGACAAGTCCACATATGTGGAGTCTTCAACCAAAATCTATGATGATGTAAGAGTCACTTTTAAGCTGCATTAGAGCAAATTCAGATGAATTCATATTGTTCCATGATTAACATGTTTTTTTTCCCCAGATGGCCTTTAAGTACCTGTCCTGGCTGTTGTACCCTCTGTTTGGATGCTATGCAGTGTATAGCT[T/A]ATTATATGTGGAACACAAGGGCTGGTACTCGTGGGTGCTCAGTATGCTTTATGGGTTCTTGTTAACCTTTGGTAAGTAGAGCTTCACATCATGTTTGTTATGTCTTCATGCAATTGTGATTACCAAAAGCACGCTCCCAGACTGTGTCCACATCAAATAAGAACTAGATGCCTGAGGAAAACACTGCAAAGGGGAATTCAACTTATTAGCATTTAAGACTCAAATGATTTTCTACAGTGCTGTGAAATAGAATAAGAAAGAGCACTGTATGGTCTTTGTGAAATCCAGTTGTTAGCCCTGGGGATATGATTGCATGTTGAAATATATTCATGTTTAATGGATTTCATAATGAAAGTTACAGAGAAACGTTTTGTCAGATGTGGCTCTTTGGTATGGTTTAAATAGAGTTGCAGACAATTTTCCAAAAAAAATGATATTTAATTTAATTTTTTTATTTCATATATATATATATTTTTTTTTTTTTTTATGTTTTTATTTAT
Associated Phenotype:
Not determined