ZMP
kdm5bb
Ensembl ID:
ZFIN ID:
Description:
Lysine-specific demethylase 5B-B [Source:UniProtKB/Swiss-Prot;Acc:Q6IQX0]
Human Orthologue:
KDM5B
Human Description:
lysine (K)-specific demethylase 5B [Source:HGNC Symbol;Acc:18039]
Mouse Orthologue:
Kdm5b
Mouse Description:
lysine (K)-specific demethylase 5B Gene [Source:MGI Symbol;Acc:MGI:1922855]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34426 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa45325 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa10483 | Nonsense | Available for shipment | Available now |
| sa41230 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa11572 | Nonsense | Available for shipment | Available now |
| sa14544 | Nonsense | Available for shipment | Available now |
| sa21313 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa34426
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Essential Splice Site | 175 | 1522 | 4 | 28 |
| ENSDART00000108508 | Essential Splice Site | 175 | 1503 | 4 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29190701)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28318619 |
| GRCz11 | 8 | 28337758 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGATCCTGTACCCGTACAACCTCTTTCAGTCTGGGACAAATCTGCTGG[T/A]GAGTTTAACATGTAGATGTATCAGATCTATATATCACACACTTTACATAA
Long Flanking Sequence:
GGCTCAAACCAGAGTCAAACTCAACTTCTTGGATCAGATCGCCAAATTTTGGGATCTACAAGGATGCACGCTCAAAATTCCCCACGTGGAGAGGAAAATCCTCGATTTGTACCAGCTCAACAAAGTGAGCGACACTTACAGTCAGGTTTCAATGACAGACTGTACAAGTTGTGAGCCATTATGATTGCCAAAACCTGTTAACACATCTTTGTATGTGTCATTCATGTAACAGATGGACTCTTTATAGTTGATCAAAAGAAACAAAAGCATTGATGAATGTTTGTTATCTTTCTGTAATGAACTCCAACACTCTTTCTCAATCTGCCAGTTGGTTGCAGATGAGGGTGGGTTCGATTTAGTTTGTAGAGAGAGGAGATGGACCAAGATCGCCATGACGATGGGTTTTGCCCCAGGCAAAGCTGTGGGCTCCCACCTGAGAGCCCATTACGAGAGGATCCTGTACCCGTACAACCTCTTTCAGTCTGGGACAAATCTGCTGG[T/A]GAGTTTAACATGTAGATGTATCAGATCTATATATCACACACTTTACATAAAGCTTTCATGCAGGAATTCACAGCATGTGTATGGGCAGATTTTTGGGGGGTTGGAGATTGGTTACAGCTGGTCTCCAGTGTTAGAGCTGTGCCTCCGGGGTTAGCTGTATTAGGTCTCATTGAGCACACTGTGGTTTCTGCAGAATGGTATTAAGTGTTTTATCAACTGTCCATGTTTGTTTTCAGTTGTGTTACTGCTGTTTGTGCCACAGCCAGATGTGGTTATAAATGACTTGACATGGTGTAAAGATGAGTTTTAATCAACCTGATCACAAATGGATGAGGCTAAAGACAGGTGTGAACAGGATCTAAAATGTTTTAAACATTTGTGTTTTCAACTACCTACTGAGGTAGCTGAAAACACATTCATGATTGCTTTCATAGTGTAAACACTCATGTGGCTAAATGCTTTCACGCAACCACAAAAGACCTCCTACTTTCTGCCTACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45325
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Nonsense | 234 | 1522 | 6 | 28 |
| ENSDART00000108508 | Nonsense | 215 | 1503 | 5 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29186854)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28314772 |
| GRCz11 | 8 | 28333911 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGGCAAAATGTTCCACTTCAGCCTAGCAACACGAGCGCACCGGCTAGA[C/T]GAGCCAAGAGGATGAAAACAGAGGTGAATATAAACACATACGTATGCCAG
Long Flanking Sequence:
ACCCTTTTATAGCACATTAGCTTAGAGATATATACATAATATACTAATACTAACATCTAAAAACATTAATTTTGTTTTGCACATACTTTAAAATTAGTACAATTCATCTAAAACCTTATGAAAGCTTTTTATGAGGAAAAGGACAAAATTTAAATCTATATTTTTATGAAAACACTGACCTTTAAATTATACCCTAGACACATTGGTACTATGGAAAAGTTTAGCCATTATGCTCACTATCGCTTTTTGTGTTTAACTGGAAAGAATAAAGTCATACCGGGGTAAAACAACACGAGCTCAAGTAAAATATGACAGAGTAGACATTTTTCTAGGCTACCAACTCTTACTTACGGAGTGAGCCTTGTTCTTTTTTTTTTCTTTAGTGTCTGCAGAAGCCTGGGGATGAGGTGAATGACATTGACAAAGAGTATAAACCCCACGACCTACTGCAGAGGCAAAATGTTCCACTTCAGCCTAGCAACACGAGCGCACCGGCTAGA[C/T]GAGCCAAGAGGATGAAAACAGAGGTGAATATAAACACATACGTATGCCAGTTTTCTTAAAGTGTTGGTGAAGGAATTTATAATATGGTTTTGACTTTCTTTCCGATAACTTGTGCTAAATTAGGTGCATTCTTGTTCAATTAAATTGGTAGAAAAAAAAAACTGATATAAACACAATGAATTGTGTATAATAATTTGTGTCTCATTTTTTGCATCTGCAGTCTGGCTGTATTAAGTCAGAGGAAGGTGAGGGGGTTGAGAACAAGCCAAATCTCAGGAGGAGGATGGGTTCTTTCGTTGTCAAGACTGAACAAAGTGAGCATCTACCATTTGCGTCTAACGTCTGGCTCAGATCTTCTGTAGCCAGTAAAGCAAAGCAAACATGGGATTAGCATAGTTTTTTTAGTCAAATCAGATTCCTTGTATTAACAAATGTGTTTTTATTGTGTATTAGAAAAGGAGATCCCTATACAGGTGAAAGAGGAACCTGTGGAGATAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10483
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Nonsense | 315 | 1522 | 9 | 28 |
| ENSDART00000108508 | Nonsense | 296 | 1503 | 8 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29183696)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28311614 |
| GRCz11 | 8 | 28330753 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTATATATAAATATGKCATGTGATTTATYCGKCTATAGGTGGACCTCTA[T/A]GTGTGTTTAGTGTGTGGAAAGGGAAACGACGAGGATCGGTTGTTGCTATG
Long Flanking Sequence:
GCATAAATGTATGCCTATCTCTCATCCGTGTTGTTCAAAAAGCTTGTTGGTCAGCAAACAAAAGCGAAACCTATGCTTATTGGTTGTGATATAGCGAGTTTGAACCAATCTGGGCATGGAGGAGGGACAATGCATCAATATATCATGTCTGGTTTGTCCGGAGACACAGTGACGAGCGTTTCTTTGTCAAATCAGCGTTGTCAAATTTTGATGACGTAACCGCACTGATTTCGGAGCCTCTGAAAGTCCGCGAATGTTATGTGATACAGCACTGGAAAGCTGAGATTCTCTTCTTTATGCCAATCTTTGAATTGTATGAATCGGATCAGCGGATCAAAAGTTATTAAACATTTAAGAGCAATACTTATTTTTAGCCGCGGGCGGCTGTCTCGGTCTTTAAGGGTTAATAATAAATCTAAGCTCTTAATTCTTTTTTTTTGCTAAAATGTGTTTATATATAAATATGGCATGTGATTTATCCGTCTATAGGTGGACCTCTA[T/A]GTGTGTTTAGTGTGTGGAAAGGGAAACGACGAGGATCGGTTGTTGCTATGCGACGGTTGTGATGACAGCTACCACACATTCTGCTTAATCCCGCCCCTAACCGATGTTCCGAAAGGTGATTGGCGGTGCCCTAAATGTCTGACTCAGGTAGGTTTGATTAGTAAACAATAAATCTGTTGGTTCATCATCATTTAAAGTAAATAGAGCAGCAGGACATAAATTTGACAGCACCGCATAAAGCATCCCTAACCAAACAATGCAGCTTTTGTAGAGACTATAAGTGGGATCAAAGATTGACTCATTATTTTTGTGTTTCTGCAGGAGTGCTGTAAACCTCAGGAGGCATTTGGCTTCGAGCAAGCACACAGAGACTATACTCTCAAAGCCTTTGGGGAAATGGCAGACTCCTTCAAGTCAGATTATTTCAACATGCCTGTTCATGTATGTAAAAATCCCTACTGAAGCTGTTGAGTCTCTTGATTATATATTTACAAATCTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41230
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Nonsense | 344 | 1522 | 9 | 28 |
| ENSDART00000108508 | Nonsense | 325 | 1503 | 8 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29183610)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28311528 |
| GRCz11 | 8 | 28330667 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCGGTTGTTGCTATGCGACGGTTGTGATGACAGCTACCACACATTCTGCT[T/A]AATCCCGCCCCTAACCGATGTTCCGAAAGGTGATTGGCGGTGCCCTAAAT
Long Flanking Sequence:
TGATATAGCGAGTTTGAACCAATCTGGGCATGGAGGAGGGACAATGCATCAATATATCATGTCTGGTTTGTCCGGAGACACAGTGACGAGCGTTTCTTTGTCAAATCAGCGTTGTCAAATTTTGATGACGTAACCGCACTGATTTCGGAGCCTCTGAAAGTCCGCGAATGTTATGTGATACAGCACTGGAAAGCTGAGATTCTCTTCTTTATGCCAATCTTTGAATTGTATGAATCGGATCAGCGGATCAAAAGTTATTAAACATTTAAGAGCAATACTTATTTTTAGCCGCGGGCGGCTGTCTCGGTCTTTAAGGGTTAATAATAAATCTAAGCTCTTAATTCTTTTTTTTTGCTAAAATGTGTTTATATATAAATATGGCATGTGATTTATCCGTCTATAGGTGGACCTCTATGTGTGTTTAGTGTGTGGAAAGGGAAACGACGAGGATCGGTTGTTGCTATGCGACGGTTGTGATGACAGCTACCACACATTCTGCT[T/A]AATCCCGCCCCTAACCGATGTTCCGAAAGGTGATTGGCGGTGCCCTAAATGTCTGACTCAGGTAGGTTTGATTAGTAAACAATAAATCTGTTGGTTCATCATCATTTAAAGTAAATAGAGCAGCAGGACATAAATTTGACAGCACCGCATAAAGCATCCCTAACCAAACAATGCAGCTTTTGTAGAGACTATAAGTGGGATCAAAGATTGACTCATTATTTTTGTGTTTCTGCAGGAGTGCTGTAAACCTCAGGAGGCATTTGGCTTCGAGCAAGCACACAGAGACTATACTCTCAAAGCCTTTGGGGAAATGGCAGACTCCTTCAAGTCAGATTATTTCAACATGCCTGTTCATGTATGTAAAAATCCCTACTGAAGCTGTTGAGTCTCTTGATTATATATTTACAAATCTAACCTTAAATCATGTCACTTATCATTAAGAAGCTCTGTTTTTTTTTTCTTGTGAACGATATTTGATGTAGATGGTACCCACTGAATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11572
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Nonsense | 382 | 1522 | 10 | 28 |
| ENSDART00000108508 | Nonsense | 363 | 1503 | 9 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29183321)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28311239 |
| GRCz11 | 8 | 28330378 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCTGTAAACCTCAGGAGGCATTTGGCTTCGAGCAAGCACACAGAGACTA[T/A]ACTCTYAAAGCCTTTGGGGAAATGGCAGACTCCTTCAAGTCAGATTATTT
Long Flanking Sequence:
CGCGGGCGGCTGTCTCGGTCTTTAAGGGTTAATAATAAATCTAAGCTCTTAATTCTTTTTTTTTGCTAAAATGTGTTTATATATAAATATGGCATGTGATTTATCCGTCTATAGGTGGACCTCTATGTGTGTTTAGTGTGTGGAAAGGGAAACGACGAGGATCGGTTGTTGCTATGCGACGGTTGTGATGACAGCTACCACACATTCTGCTTAATCCCGCCCCTAACCGATGTTCCGAAAGGTGATTGGCGGTGCCCTAAATGTCTGACTCAGGTAGGTTTGATTAGTAAACAATAAATCTGTTGGTTCATCATCATTTAAAGTAAATAGAGCAGCAGGACATAAATTTGACAGCACCGCATAAAGCATCCCTAACCAAACAATGCAGCTTTTGTAGAGACTATAAGTGGGATCAAAGATTGACTCATTATTTTTGTGTTTCTGCAGGAGTGCTGTAAACCTCAGGAGGCATTTGGCTTCGAGCAAGCACACAGAGACTA[T/A]ACTCTCAAAGCCTTTGGGGAAATGGCAGACTCCTTCAAGTCAGATTATTTCAACATGCCTGTTCATGTATGTAAAAATCCCTACTGAAGCTGTTGAGTCTCTTGATTATATATTTACAAATCTAACCTTAAATCATGTCACTTATCATTAAGAAGCTCTGTTTTTTTTTTCTTGTGAACGATATTTGATGTAGATGGTACCCACTGAATTAGTGGAAAAAGAGTTCTGGAGGTTGGTCGGCACCATTCAGGAGGATGTGACAGTGGAATATGGCGCTGACATTGCCTCAAAAGAGTTCGGAAGTGGGTTTCCAATCAAAGGTGGAAGATTTAAGATTGCACCGCACGATGAGGTATAGCTGCTGCATCAATTCTGGCATATTACTCATAACGTAACTTATTAATTCCATTTCTATACCAAGTACATCCTGTTTCCATTGCTGATGTTGCTGTTTTGTGAATTCACTTGCTGTAGAAATATCTTCAGTGTGGTTGGAACCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14544
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Nonsense | 661 | 1522 | 15 | 28 |
| ENSDART00000108508 | Nonsense | 642 | 1503 | 14 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29180518)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28308436 |
| GRCz11 | 8 | 28327575 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGCTGACTGTCTTGATGTGGTTCTGGCGTCAGCCGTACAGAAGGACATG[C/T]AGCTCATGATCAAAGAAGAGAGAGAGCTGCGGGAGAAAGTCCGWAAGATG
Long Flanking Sequence:
TCACAATCATGAATCCTAATACACTCATGGCCCATGGAGTACCAGTGAGTAGCATATTAATACACAAACATTTATACACACAATCATTTACCCCACCTGTGAGTAACAAGCATGAATCTCTTTTTAGATTTACAGAACCAATCAGTGCGCAGGAGAGTTTGTCATTACTTTTCCGCGATCCTATCACAGTGGCTTCAACCAGGGCTTCAACTTTGCAGAGGCTGTGAACTTTTGCACAGTGGACTGGGTGAGATTTTCCTGGATCCATCCTGGCATTACACTGTTACCTACATTTTCTTGGGCTGATGTGATTATAATAATTTTGCTTCATTTTTTTTCTCTTAATATGTGTGCAGATGCCACTGGGGCGTCAGTGTGTGGATCACTACCGCCAGCTGCATCGCTACTGTGTGTTTTCTCATGATGAGATGGTGTGTAATATGGCCATGAAGGCTGACTGTCTTGATGTGGTTCTGGCGTCAGCCGTACAGAAGGACATG[C/T]AGCTCATGATCAAAGAAGAGAGAGAGCTGCGGGAGAAAGTCCGTAAGATGGTGAGCGAACACAATTTAATCCTGTCAAGTCAATGCAGTTTGGGTGGATGACACTTCATGGCGCAGTGCTTATTATCCTTCTCGCTTTGGGAAATAGTGATGGGAGGTTTGGATCATTTTATTCACTCCATTGAGTCCATTGGGTTCTTGTTTATTTTTCAAGTCAATGTGCCAAAATATTATTCATATGTTATGAGTTTCTTCCAAACCAAACATTTACAACTAGCCCAAACCTTCACTACAAACAAGTCATGACTAGAATGCTATGAGAAAGAGAAAATAATCATTTGTTTATACATTTACCTGGATCTTTTGTCTATGATTAGCACACCAATGCACAGTCTGAGCTGGAAGGACCAATGATTAGTTCACCTCTTGAAGTCTTTGGGTTTTTGAGTCGTTTGTTTGTCATGTGACAGCCTGACCGGTGCATTTCCACTACAGCATCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21313
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005583 | Nonsense | 1361 | 1522 | 26 | 28 |
| ENSDART00000108508 | Nonsense | 1342 | 1503 | 25 | 27 |
Genomic Location (Zv9):
Chromosome 8 (position 29166195)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 28294113 |
| GRCz11 | 8 | 28313252 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGTCTCAGTCCAGAGCTGGAGGAGCTGATGGTGGAGGGTTTGGTCCTG[C/T]AGGTTTCTTTGCCTGAGACCCAGCAGCTCTACAGGCTTCTGCTGTCTGGC
Long Flanking Sequence:
AAAAAGTGCTTAGGTACCTTAAATAATGTTTCTGTGCTCTTTGGTCAAGGGAAAATCTTTTTTTCCACATTTTTTTGAGTGCCTTGAACTGATTTTTGCTGTTTATTCTTTTATAGGTATATTGTAACTTATATTTGTAATCTGGTTTATATAAAATATATTTAATATTTAATGGTTAAGTTGTTTAATTATCTACTAATATTAAACTAGTTTTTATTTTTTTATATTAACTATAAATAATTAACTTGTTGACTTTTGTTGTAGCTGCAGCTGTGTGGCTCTCCATCTCGGTGTCAGGACTGGGCAGTTTCAGGGCAGGAGCAGACGGTGTTTTACACAGAACAGCGCTGTATTCCTCTCCAGGGTCTGTATCTTGTTCACATCTGCTGAAATCTTGTTGTGCGTAATATTAAAACCGCAGCTGTTTTATGCTGAATCTCTGTGTGTGTTCAGGTCTCAGTCCAGAGCTGGAGGAGCTGATGGTGGAGGGTTTGGTCCTG[C/T]AGGTTTCTTTGCCTGAGACCCAGCAGCTCTACAGGCTTCTGCTGTCTGGCCCGCCAACCACAAACACGTCCCACGCAGAACACAAGTCCTACCTCACACCACCACAGACAGAGGTAAACACTGAGAGCCTCGAAACAGATTAGATATTTACATTAAACTTAAAACACTGAGAAGAACAATCAAAAAATTCCCTCCAATAGTGATAATGTTTAAATAATTCAGCACAAACAGACCAAGAGTTCTGAGTTGAGCAAAAGTGTATAGGAATATTAGGCTTAGTGTTGGATATCTGGATTTCAGATGAAGGAGAGCCGCCTTGAATCCACCAATCAAGGGAGGCTGCTGTTACCATGGCAACCAGAACCATGGCAAAATAGCTCAGCAACAGCTTTCAGATCTCATAAAGCATGGGTTACATAATTTAACCAGTTTGCCTGCTATCTGGTTAGATTTGAATCATTTTCAACAAATATGGTCATACTGAGTAGTTCTATTATTTT
Associated Phenotype:
Not determined