ZMP

sox6

Ensembl ID:

ENSDARG00000015536

ZFIN ID:

ZDB-GENE-081120-6

Description:

transcription factor SOX-6 [Source:RefSeq peptide;Acc:NP_001116481]

Human Orthologue:

SOX6

Human Description:

SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:16421]

Mouse Orthologue:

Sox6

Mouse Description:

SRY-box containing gene 6 Gene [Source:MGI Symbol;Acc:MGI:98368]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa20951	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa20951

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000100998	Nonsense	252	768	6	15

Genomic Location (Zv9):

Chromosome 7 (position 28498299)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	27101238
GRCz11	7	27372431

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCCCTTTGTAGATCGCCAGACAACAGCAGCAACTTCTGCAGCAACAGCAC[A/T]AAATCAATCTCCTCCAGCAGCAGATTCAGGTCAGTGCTCGACTTTCACGT

Long Flanking Sequence:

GAACACTTTGTAATTATATTTGAAAATGAAAATTAAATGACACTTAAACCTAGGCTGTCAGGCTAACTGAGGAGGAGGAGGAACGGGGGAGTCTGTAGAGGCTGGGGAGAGAGGGAGGGTGGATGGGATTCGTTTAACGTCGAGAGCCCACCCTTGGGCAGACCCGACCACTCCTAGGTTGCATAAACATGCCAGTCTTTCACCCTGCAGCGCATCGCCCTGGCCCGGCCCGGAGCTGGGTATGATGCACATTAGCAGCTTCCTGATTACAGTCATTAGGGTCAATTGGTGGACCAGAGATGTTACCCACAAGCTCTGATTGCATGCATTATCTGTCTGCATAAATACATGCTATAATAAATCAGGTTGCTCTCTTATACGCAGTGATAATGCACATACTTTTAACGGTGTAGGCCAGTCTTTCTTGGCGTTCATCTAAACAAATTGTTCTCCCTTTGTAGATCGCCAGACAACAGCAGCAACTTCTGCAGCAACAGCAC[A/T]AAATCAATCTCCTCCAGCAGCAGATTCAGGTCAGTGCTCGACTTTCACGTCTTCATCTCCTCTTCTGTCAGAAACCCTTATTTTGTTTTTACAACTGTCATCAATCACGTTACAACTGTCACCAATCAGGATAATTGGCCAATGGTAATTCGGAAGGGGCTATAGATGTGTCGAATAATTATCACTCCCTAATTAATGAAGGAAGAGAAGAAGAAAAAAAACAGAAATGAGGGAAAGCTTAATGACACCAAGTGGTGCCTGTTTGCATGTTTTGTGGAAAAGTGCCCTAAGGGTTTGAGACATGAAAGCCGGTGATAAATGCCTCTGAAATTACACCGTCCCAGCGCGGTGACGTGGCAGCGGCTTTGGAAAAAATAGCGCTACTGTTAGCCCCGTTTCCCACTGTCCGATATTGAAAAAAATCACGTTCCTTTGCTTTAAGGGTGCTTTCACACTTCAATTACCTGCATCAAACCCAAGTTCAATTGCCACCTTCTTGT

Associated Phenotype:

Not determined