Busch Lab

ZMP

sumo2

Ensembl ID:
ENSDARG00000046062
ZFIN IDs:
ZDB-GENE-040801-7, ZDB-GENE-040801-7
Description:
Small ubiquitin-related modifier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6DHL4]
Human Orthologues:
RP1-241P17.4, SUMO2, SUMO3, SUMO4
Human Descriptions:
SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:11125]
SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:11124]
SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae) [Source:HGNC Symbol;Acc:21181]
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:C9J3L3]
Mouse Orthologue:
Sumo2
Mouse Description:
SMT3 suppressor of mif two 3 homolog 2 (yeast) Gene [Source:MGI Symbol;Acc:MGI:2158813]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa39984 Nonsense Mutation detected in F1 DNA Not yet available
sa6026 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa45129 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa39984
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022839 Nonsense 28 96 2 5
ENSDART00000066629 Nonsense 28 96 2 4
ENSDART00000130099 Nonsense 28 124 2 8
Genomic Location (Zv9):
Chromosome 3 (position 6947860)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 6553286
GRCz11 3 6439394
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACAGAAAACAACGACCACATCAACCTGAAGGTGGCGGGTCAGGACGGCT[C/A]GGTGGTCCAGTTTAAAATCAAGAGACACACACCGCTCAGCAAACTCATGA
Long Flanking Sequence:
CACAGAAATGCCAACTGACCTAGTAGGGGCTTGAAGCAGCGACTTTCTGGCTGTGAGGCCACAGTGCTAACCACTGAGCCAACCTGCATTGCAATACATATTTGCAGAAAAATAAAATAACGCCCGTATCAGATTTTTCCAGTCTTGTGCAGTCCTAATATGAAAGTATTTTTGGTTATTGAGGATATTGGGTGTTCATTCATTTTCTTTTCGGCTTAGTCCCTTTATTAATCAGGGGGCGCCACCGCGGAATGAACCGCCAACTCATGAAGCATATTTAGTTTTACGAAGCAGATGCCCTTTCAGCTGCAACCCATCTCTGGGAAACAGTCATACACACTCATTCACTCTCATACACTACGGACAATTTAGCCTACCCAATTCACTGGGAAAGATATCGGATGTTGTTCATTTATAATCTCTTCCGCTGTTTTGTCAGGAGGGTGTAAAGACAGAAAACAACGACCACATCAACCTGAAGGTGGCGGGTCAGGACGGCT[C/A]GGTGGTCCAGTTTAAAATCAAGAGACACACACCGCTCAGCAAACTCATGAAGGCCTACTGCGAGAGACAGGTGAGATCACACACACACACACACACACACACAATATAAGCCCCTTTCACACATACAGACCTTTCCGGAAAATTACCGGCAATTTTCCGGAAAGGTTGTATGTGTGAACAGGCCCTTTTTGAAAATACCGGTAAATTCGTTCTGGCTATTTTCCGGAAAGAGAAGTTGTAACATTACCGGCAATTTGCCGGAATGCTGCGCTGTGTGAATGCAGAAGGAAGATTGCCGTAATAAGCGCGTCCACGTCTAGAACGGGCTGACGTGAGACGTCTGCTTTAGCCAATCACAACAGTCTGACGCATTCACGTGCGCTCGGTTTATGAGAATAAAAGCCTTTGAATATTTTTTCCAGACACCTTTAGCTGCTAGATGTTAGTCAGATCACGTTTTTATGTTCCTTCTTAATGCTGTGTAAATAATTATCGATAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6026
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022839 None None 96 None 5
ENSDART00000066629 None None 96 None 4
ENSDART00000130099 Essential Splice Site 81 124 4 8
Genomic Location (Zv9):
Chromosome 3 (position 6961581)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 6539547
GRCz11 3 6425665
KASP Assay ID:
554-3703.1 (used for ordering genotyping assays)
KASP Sequence:
TACTATGTACAATATTATATGTGCAGCTGTCATGCAAATTGGCATGTAAA[A/G]TGTGTTGTTAAATACRTGTATTGTGTATAAAATGTATTGATGTATTGAKT
Long Flanking Sequence:
GAGTTAATCGTTACTTTTAGGATATGTAATTTTAAGCAGCAGATGGGGAAGAACTGTCTAAACTGGGGAATTCCTCCAAATCAAAAACGTCTATGTTAGATCCTATACAATTCTTATTAAAACAAGTTGCTGAACCTGATCTTAACATTTTCAATTCATCCCTACTTTTAGGATATGAGCCTAATTTTCCTTGCTTTCATTTTTAAATATAAAACTGTCCACATGAAAGCGCAATAACTCACCGTGACGCATGTTAAAATTCAGAATCAGAAAGAGTATTATTGCCAGGTGTGTTCACACTTGCGAGGAATTTGTTTTGTTGACTGAAGCTTCTACTGTGCGACAGAATTACAAAGACAGGACAAAAAAAACCCATAATCAATTAATTTAAAAATAGAAGTAGTAAATGCAAATATACTAATTGACAAGTATACGTATATGTTTGTATATTACTATGTACAATATTATATGTGCAGCTGTCATGCAAATTGGCATGTAAA[A/G]TGTGTTGTTAAATACGTGTATTGTGTATAAAATGTATTGATGTATTGAGTGATTTCACAATTACTATCATAAGGCACACCAAACCAACAGGGGGCGATATTAGCTTTTTATGCTAGGTTCACACCTAAAGGCTGATTTTTACTTCTGCGTCAAGCGCACGCGTGGATGCATCGTCCTTGCCTTGGCCGTCGGCGACGTTGACGCGCACTTCTCAAAAAATGTAACTATACGTCGTGACGACGCATAGCGCAAGCTTTGTGATTGGTCGGCTTGGCAGCGCTGACGAGTGTGGGCGGGACTGAGAGCCATGCAAGTCCGTTGGACCGATTGTTTACAAGTGTGGAGTCCCGTGAAGGTTTTCCCATGACGTGTTTTGTGTTTACCTCATAGTTAAAGTTGTTGCACGTTGGCCGGTTCCTGCCTCAAATTGAGCGAGTTTCACCACTTGTACATTAAGGAAGCGCTGAGAAAAAACAATACAACAGCAAAGAAACTCGACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45129
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022839 Nonsense 95 96 4 5
ENSDART00000066629 Nonsense 95 96 4 4
ENSDART00000130099 Splice Site None 124 None 8
Genomic Location (Zv9):
Chromosome 3 (position 6963425)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 6537703
GRCz11 3 6423821
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGAGGATGAAGACACAATTGACGTTTTCCAGCAGCAGACAGGAGGACAC[C/T]GAATCTGAATAACTCTCCACCGACATCTCTCTCTCTCTCTCTGCTCATCT
Long Flanking Sequence:
TAAGTACTGCATTTCAATCTAAACGTACTACTCGGCCGTTAGAAAAGTATGTTCTATAGAGTATGAATGTAAAAAGTATGAATGGGATTCGAACGTACTACATCCGCCATTTTGTCATGGTCACGTGACCTACCTGCGTCAGTTGCGTCGCTTTACATCCATTCATGAATTCGCTCGCGGGGCATCATGGGATAGCGCAGCATGCATGGGATGCGCACTCTGGAATCTCGCCGGAAGTAGTAAGTCATTCGGGTACTTCTCGCATACTGATTTTCGAATTCTATGAATTCGGACATACTACTCGGCTCGCATACTGATTTTGGCGTACTGTATAGTATGGAAGTTTGCGGTTTCGGACGCAGCGCAGCCCTCCAGGACCGAGTTTGGACACCCCTGATATATAAACACTGTAATATAGACTGTTGTTGTTGTTGTTCCCGCAGTTGGAGATGGAGGATGAAGACACAATTGACGTTTTCCAGCAGCAGACAGGAGGACAC[C/T]GAATCTGAATAACTCTCCACCGACATCTCTCTCTCTCTCTCTGCTCATCTGTACCTGCTGTTGTATAGTGTTTTCACCATTTCATGTTCACCATGTTCCTCTTTGGTTTTGTACATAAAGGGTTCCTGCTCCAGGACTATCACAGCCAGATCATGTGAGAAAGCCAGCCGTGTGTGTTTTTGAGTTCAGGGTTTGTTCTGCTTCAGATACGAGCACACACACACACACACACACACACACACACACACACACACACACACACACTGGCCTTTTTTTTTTTTGCCAAGTTGAAATTGTGGATAAATAAATGCATAGATGCTCTGCTCTGTTACTTCTCAAGCAGACACAAAAGCTGCGGGTTTCCATTCAGACTAATTGGTTTTATTTTTGTTTTACCGTAGTGGTCATGTATAGTGAGGCACTTGTGTTCAACATGTTTCTACTCCAGTGGTTAATCGAGGGAATTCATGTTTCAGACAAGTCCCAGCCATCCGTCTGTA
Associated Phenotype:
Not determined