ZMP
ncl1
Ensembl ID:
ZFIN ID:
Description:
Nicalin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NZ07]
Human Orthologue:
NCLN
Human Description:
nicalin [Source:HGNC Symbol;Acc:26923]
Mouse Orthologue:
Ncln
Mouse Description:
nicalin homolog (zebrafish) Gene [Source:MGI Symbol;Acc:MGI:1926081]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10449 | Nonsense | Available for shipment | Available now |
| sa15700 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10449
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081801 | Nonsense | 452 | 572 | 11 | 15 |
| ENSDART00000132942 | Nonsense | 452 | 571 | 11 | 15 |
Genomic Location (Zv9):
Chromosome 22 (position 4945743)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 4856989 |
| GRCz11 | 22 | 5241364 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCATTGTGTCATCCAGGGCGTCACCGGAGACCTGGAGATCTTCACTGAA[C/T]AGATGGTGAGTATGAAGCACAAAANTACCATGTTCATAACATTTGGTACC
Long Flanking Sequence:
AGTTTCTTTAATTTTTTAAATTCTTTTCTAAGCTTTATTATTTTATTATTTACAGTTTTTGTAACTTGGGTATTTAGTACATTTAATTATCTATAATACAATTGTTTTATATAGTGTATTACAAATGCACAAGATATATATATAAATGCAGATATATTATGTCAAAACAAATGTTTACTTTGGATGCGATTCGTCTTTTTTTAAAAATAATTGTGGTTTTAAAGTGTTGTTAGTAATGATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATGTACTCTTTTTAAACGCTTTAGATTTACACAATTACAAAAATCTCATAACAATTTTCTTCGTTTTATTTTGTAATTTCAGCTTTGTTTAATATTGTTCTTATATTACTAAAAAACAATAAAAAGTTATATTAAATAATCATTGTGTCATCCAGGGCGTCACCGGAGACCTGGAGATCTTCACTGAA[C/T]AGATGGTGAGTATGAAGCACAAAAATACCATGTTCATAACATTTGGTACCGCAGTTGAAACTTTATTCTTCATCAGCACGATATTCTTACATTATATTAGCAACATTTTAACTCGTGGTTAAGGAATAGTTCATCCAAGACTGAAAATCCTGTCATCCTTTTAGGATTTACCAGTTTGAGTTTCCTTCTTCTGTTAAACTGGAAAGAAGATATTTTGAAAAATGTTAGAAACCTACAACTATTGACTTTCTTAGTATTTCTGTTCAACAGGAAACTCAAAGGTTTTGAACCACTTGAGGGAGATAAATAATGTGTACATTTTCATTTTTGGGAGTACTTTAACGCACACTAACAGAATGTCTAAAACACAAACAATTTGCTAATTCACTTTAGCAGTTTTCCTCAGTCTGCAACAATTAGTGGGTGAACTATCCCTTTATGTACCTAGTATTTTACTTAAAATGAATGGTATTTACATTACAAGGTAAACAGCGGAGCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15700
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081801 | Nonsense | 504 | 572 | 12 | 15 |
| ENSDART00000132942 | Nonsense | 503 | 571 | 12 | 15 |
Genomic Location (Zv9):
Chromosome 22 (position 4944899)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 4856145 |
| GRCz11 | 22 | 5240520 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGGAGCATCAGCTCAGCCGATACCTGAAGGACGTCAAGAGACACTTGGTG[C/T]GAGCAGACAAGAGGTCAGTCTGCACTCGCCGCTGCTGGAGTRGGCAAAWA
Long Flanking Sequence:
GCACACTAACAGAATGTCTAAAACACAAACAATTTGCTAATTCACTTTAGCAGTTTTCCTCAGTCTGCAACAATTAGTGGGTGAACTATCCCTTTATGTACCTAGTATTTTACTTAAAATGAATGGTATTTACATTACAAGGTAAACAGCGGAGCTGACACAACCCTGCGGTACTTCAACATTTGTTATAATAGCAGATGACTTTGTTCACTTTGACTCTCTGAACTCTACTAGTGAGAAATGAAATATACCAATGAGTCAAATAGAGATTACCACCTAACAAAGCACGTTTTAAAGCTACTATGTCAGACTTTTTTCGACGTGTCTCACGGATTAGTGTTTGTGGTCAGCAGGTGCAGGAGGATCAGCTGGCGTCTCTGGTGGACTGGTTGACCGCTCAGCCTCGAGCCGCTCAGCTTCTGGATAAAGACAGCAGCATCATCAACACGCTGGAGCATCAGCTCAGCCGATACCTGAAGGACGTCAAGAGACACTTGGTG[C/T]GAGCAGACAAGAGGTCAGTCTGCACTCGCCGCTGCTGGAGTGGGCAAAAATAATGACTTTGGTTTCAAAAATGTTTAACACGTCCGTGTTCTGCTAACATTTGAGTGCTGTTGAGCGTGTCTTTAAATGTGTTGTATGTAGTTTTTAACTCTTAAGGCTGGAAAAGACGGAATTCACTTGAAAAATATGTCATTTTGTTGTTGAGTATTGAGATAACAATATTTCTTATGATATGACATTACAATAAAACATAATATACATCAATATAAAGATATTTTATTAGATCTGTTTTTAAGTAATTTATTTAATGATGTTAAAATAAACAGGTTAAAGATATTTTTCACACTAAAAACAGCATCAAGGTGCAAATATTAAGTCAGTGAAAACCTCCACAGATATTCTGATTCTGATTGGCTGTTGTCATTTTAGTCTCATCTCGACTCCCGCCATTACTGTTTATTTTTAGCTTTGGTGCAACTTTGAGCCGCTCCAGCCAATAG
Associated Phenotype:
Not determined