ZMP
gata4
Ensembl ID:
ZFIN ID:
Description:
transcription factor GATA-4 [Source:RefSeq peptide;Acc:NP_571311]
Human Orthologue:
GATA4
Human Description:
GATA binding protein 4 [Source:HGNC Symbol;Acc:4173]
Mouse Orthologue:
Gata4
Mouse Description:
GATA binding protein 4 Gene [Source:MGI Symbol;Acc:MGI:95664]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45720 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa44950 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45720
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000049129 | Nonsense | 210 | 338 | 7 | 12 |
| ENSDART00000099559 | Nonsense | 213 | 352 | 2 | 6 |
Genomic Location (Zv9):
Chromosome 20 (position 53591186)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 53151578 |
| GRCz11 | 20 | 52956995 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTACCATAAGATGAACGGCATCAACCGGCCGCTGGTCAAACCACAGAGA[C/T]GACTGGTGAGAAAATTGCAATACTTTTTATTCTTAGTTGTTTTTATTTCT
Long Flanking Sequence:
ATTCAGTTATTAGAGATGAGATGGAGAGATGGGCACTAGTGGGCGGGGCTTTCCCCCACTAATGACATCATACAAAGGGAGAATGTCCATCACAGTGTTTCTGCAGACTGTTTTCATCAAGTCTGATTATGAACAATAGAATTAATTCATGATTACCATTAGAGGCTGGATATATTCACACACTGCTGACAAACAACTGTGTTTAAACCCCTTATGAAATAGATTTTTACATAATAGATGTCCTTTAAATGTTCTTCCGATGATCCTGTGTCTGATATGGTTGTTCATTTACAGTATTTTTGTTTATTTATTTGCATGTGTGTGTGTTTGTTTTATCAGAGTTTTTTGATGATCTGGGCGAGGGCCGGGAGTGTGTGAACTGCGGGGCGATGTCGACTCCTCTGTGGCGGCGGGACGGCACCGGTCATTACCTGTGCAATGCCTGTGGACTCTACCATAAGATGAACGGCATCAACCGGCCGCTGGTCAAACCACAGAGA[C/T]GACTGGTGAGAAAATTGCAATACTTTTTATTCTTAGTTGTTTTTATTTCTCATACTTGTTTCTTTTATCATATATATCTAAATAATAATTTATTCCTAAACTGTACACCTATAGGATTGTGCTTTAGACGCCATCTTGTGGTCAAATGCAGAAATTCATTCAGCACTATAGCTTTATTGGTATTAGCTGTTAAGTGTGCATGGGTTGGAGAGTGCATTGAGGGATTGATTGAGTGCACTTGAGAATGTCCACTATGGTTTCGGACACGAGAAATGGCTGCTCCCTCAAATAGTGCACTATTAAGGGCATAGGGGGCAATTTCGGATGTGGCCCCAGTTCACTCTACACAAGATCACCACTTTACAATTAACAAACAGCATTGGCATTCCATCATTGTGCTTTTGCACACTTATTAGTGTTATTTTGCACACTTTTGCTGTGAATTGTTATTTTGCATGCTAACGGTCATGTTTAATGTTGTTTTGCACACTTATTACATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44950
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000049129 | Essential Splice Site | 281 | 338 | 9 | 12 |
| ENSDART00000099559 | Essential Splice Site | 284 | 352 | 4 | 6 |
Genomic Location (Zv9):
Chromosome 20 (position 53587386)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 53147778 |
| GRCz11 | 20 | 52953195 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTCAGACACGAAAGCGCAAACCCAAAAACATCAGCAAAACCAAACCCGG[T/G]GAGTGTCCTGTCTGCTGTCAGATATCCCCAACTGTTTATTGTAAACTGAA
Long Flanking Sequence:
TATTATTTTTGCATATTTTGTATTGTTATTTTGCACACTTACTGTAATGTTTATTGTTATTTTGCATGCGTATTGTAGTGCTTTCTGTTATTTGCCATGCTTTATGTTATTTTGCATGCTTATTTGCACTGTTTACACTCTATATTCCATCTCTTCCTCACTGCTCTCTCCCCCTTTTTCTCTCAGTCTGCGTCCAGGCGGGTGGGTTTATCCTGCACAAACTGTCAGACTACCACAACAACTCTTTGGAGACGCAATGCAGAAGGAGAGCCAGTCTGCAACGCCTGTGGACTCTACATGAAGCTCCACGGGGTCAGAAATCTCTTTATCTGCAGTACTACATGTGTCCAGCAGATGGAGATAGAGAACCAGTAAAACCACAGCTCTGAGTGTTTGTTCTGCTGTTCTTCTGCTCAGGTTCCTCGTCCTCTCGCCATGAAGAAAGAGGGCATTCAGACACGAAAGCGCAAACCCAAAAACATCAGCAAAACCAAACCCGG[T/G]GAGTGTCCTGTCTGCTGTCAGATATCCCCAACTGTTTATTGTAAACTGAACGTCAAAACCTTTTCAATTGATTTTGAATTAGCTTTTTATATCTGTTGAGAATTTGTCCAAAGCTTTCTGTGTGGAGTTTGCATGTTCTCCCTGTGTTGGTGTGGGTTTCCTCCGTGTGCTCCGGCTTCCCCCACAGTCCAAACACATGTGCTATAGGGGATTTGATTAACTAAGTTGGACGTAGTAGTGTGTGTGTTTGTGTGTGTGTGAATGGGTGTTTCCCAGTACTGGGTTGCAGCTGGAAGGGCATCTGCTGCTTAATACAAATGCTAGAATAGTTGGCGGTTCATTCCGCTGATGCGATGCGACCCCTGATAAATCAGACTCTAAGCTGAAGGAAATTGAATGAATGAATGGCTAAAAGTGATGGTGACCTCTGACCTTTCACCTGTGTGTGTTTTGAAGGCTCCTCTGAAGGTCAGTCGGCGATCAGCGCTGTGAACTCCAGT
Associated Phenotype:
Not determined