ZMP
rbfox1l
Ensembl ID:
ZFIN ID:
Description:
Fox-1 homolog-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZT82]
Human Orthologues:
RBFOX1, RBFOX2, RBFOX3
Human Descriptions:
RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:HGNC Symbol;Acc:18222]
RNA binding protein, fox-1 homolog (C. elegans) 2 [Source:HGNC Symbol;Acc:9906]
RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:HGNC Symbol;Acc:27097]
RNA binding protein, fox-1 homolog (C. elegans) 2 [Source:HGNC Symbol;Acc:9906]
RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:HGNC Symbol;Acc:27097]
Mouse Orthologues:
D11Bwg0517e, Rbfox1, Rbfox2
Mouse Descriptions:
DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed Gene [Source:MGI Symbol;Acc:MGI:10636
RNA binding protein, fox-1 homolog (C. elegans) 1 Gene [Source:MGI Symbol;Acc:MGI:1926224]
RNA binding protein, fox-1 homolog (C. elegans) 2 Gene [Source:MGI Symbol;Acc:MGI:1933973]
RNA binding protein, fox-1 homolog (C. elegans) 1 Gene [Source:MGI Symbol;Acc:MGI:1926224]
RNA binding protein, fox-1 homolog (C. elegans) 2 Gene [Source:MGI Symbol;Acc:MGI:1933973]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa12116 | Nonsense | Available for shipment | Available now |
| sa44854 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa12116
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000027364 | Nonsense | 55 | 382 | 2 | 12 |
The following transcripts of ENSDARG00000021184 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 34134784)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 31957268 |
| GRCz11 | 16 | 31912856 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCAATGGTGATCCTTCACTTCCCCAGGTTTATGCCCCACCCCCTTCATA[T/A]CCTCCACCTGGACAAGCCCCGCCCACACCTGCTGCCCGACTGCCACCCCT
Long Flanking Sequence:
AAAATATTCTGTACTGTCATCATGGCAAAGACAAAAGAGATCAGTTATTAAAAATCTGTTATCAAAACTATTAAGAATTAGAATGTGAGTAAACGTGTTGAAAATCATCTTTCCATTAAACAGACAATTGAAAAAACATAAAATACTTCAAATTTAACTGTAGGGCTAATAATTCTGGCTTTGTTTGTATATAAAGCATAAAAGGTGCCTTTGAATCCTTTTAATACAATATGTTAAAATGTCCTTTGATATTTAAATAGTAGTTTTAATTGGCAAAATAATCTACAGTTATTTAACAGACTTGTCTAATTATTCTCTAATTTTGACATATCTAATATTTCTCTTATTATTATATAATAAATGTTTTCATAACCAGTCAACAGATTTTTCTGTTTGTAAATGCTTCTCTCTCTCTTATTATAGGGTGCTGCTGCCCAGGAGGCGGGGCCAGGCAATGGTGATCCTTCACTTCCCCAGGTTTATGCCCCACCCCCTTCATA[T/A]CCTCCACCTGGACAAGCCCCGCCCACACCTGCTGCCCGACTGCCACCCCTCGATTTCAGCGCTGCTCATCCAAATTCAGAATATGCAGATCATCATCAGCTGAGAGTCTACCAGGGCCCTCAGCACGACGGGACGGAGTCTATAACTGCCAGTAACACGGTAAGACTGATCACCTGATCATTAACTGACTTGATAAGAATAAAATCTTTAGTCAACACTGGGCAGGTACATCTATAAATATAAAGAAATAATTTGATTTTAGAAGTAAAAAAAACTGAATAATATGATTTACTTGCAGTCAAGCAGGGTCAATCTAAAAGTATGAAAATTATATAGAAACAATGTTCCTGTATGTAGCAAAATCAGTGTGTATTTGCATCAGAAAAGGTATGCCAGGAATATGTATAGGCAGCTGATATATAATCATGCTCTGGTCCTCTGGGATCTCCTGTTTGAGCTAAAAATATCTCTTATGCCCTTTGCACATCCTTCCTTTGCCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44854
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000027364 | Nonsense | 304 | 382 | 8 | 12 |
The following transcripts of ENSDARG00000021184 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 34126235)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 31948719 |
| GRCz11 | 16 | 31904307 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCGCTCCGCAGCCGCCGCTGCCACACCAGCTGCAGTGCCAGCCTACCCA[G/T]GGTCAGTCTCTCTCAATGGAAAACTAATCACTGCAAGATATTTTAGATAG
Long Flanking Sequence:
TGTTGCACATTGTTTTTTCATGTATGCCACAGCACAGCGTTCTAAAAATCATCATTGTTCTTGCATTTTAATTTTTTTAACAGTTCCTTAAAATGTTCTCTGTGAATGGCTCATTTATACGTTTTTAATTTGAAAATAAATGTTTTTAAAAAATTCAGTTCCTCACTACAAATATTTCTTATTTGTAGCTGCCGGGTGGAAAATCAATCCAGTAATGGGTGCCATGTACGCCCCTGAACTTTATACAGGTTTGAGATTTAATCTTGGCTTTGATTGTTGTTGTTCAAATAACAGATTCATTTGATTTCAGTGCATGCAGTTTGTCGTTTTGCCCACTGTCTTTTTCTCTGGGTCTACTAGTTGCCAGCTTCCCCTATCCCGTTCCCACACCAACCTTGGCCTACAGAGGCTCTGGTCTCCGTGGACGAGGTCGAGCAGTTTACAACACAATCCGCTCCGCAGCCGCCGCTGCCACACCAGCTGCAGTGCCAGCCTACCCA[G/T]GGTCAGTCTCTCTCAATGGAAAACTAATCACTGCAAGATATTTTAGATAGATGAGTTTTTTTTTTCATTTAGCTTTAAAATATACCTGCAATTACAAATTACAATTTTTTTGAGGCAATACATTTTTTTCTTTCCTCATGCCGAATCGCTCTTAAATAGCTAGCACACCAATTGCTGCTTTTATTGTGAAAAACACTACTGTTATGGTGATTACAGTTTTTAAGTACAAATATAGACTGTACATGTAAATAAAAAAGAAATTTATATGTATACACATACAGTCTATAATATTTGTACATAAAAAATTAAGCAATATACATATAAAAAATCTTTATCTGTATACACAGAGAGAACATAAAAACCACTGCAAATCCCTTATGTGTTTGCACACACTGGGCAAATAAAGCTTATTCTGATTTCGATTAAGGCTCTTGAACTTGAGTTAAATGTGAATTAGATTTTTATTTTATTTTATGACATTATTTAACATGCATAACATA
Associated Phenotype:
Not determined