ZMP
cr855317.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
CLCN1
Human Description:
chloride channel 1, skeletal muscle [Source:HGNC Symbol;Acc:2019]
Mouse Orthologue:
Clcn1
Mouse Description:
chloride channel 1 Gene [Source:MGI Symbol;Acc:MGI:88417]
Alleles
There are 10 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa9118 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa22800 | Essential Splice Site | Available for shipment | Available now |
sa32083 | Nonsense | Available for shipment | Available now |
sa44848 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa39093 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa39092 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa13816 | Nonsense | Available for shipment | Available now |
sa9348 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa9118
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Nonsense | 177 | 817 | 5 | 24 |
ENSDART00000131328 | Nonsense | 252 | 697 | 6 | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19567527)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17597850 |
GRCz11 | 16 | 17505827 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCTGTGCWGCAGTGCTRAGCAGGGTCATGTCAATCTTCACYGGTGTGTA[T/A]GAGGTAAAAATCCCTGTGAGCTTGTTTGGTGTGTGTTGCAGAAGTGTGTG
Long Flanking Sequence:
CAGCTGTATTGTGTGTGGTATGTTCAATGTCTTAAGTTTTTATGGTATTTCATCACCTTGGAATTATGTTTCTATCTGCATTCTTAATCATTTTAAAATATTGAGCTTTAAATTTTTTGCATTCCATATAGCAAACAGTATGTGTAACATTTGTTTTTAAATAACATGTCTTAAAATGTAAACAACTTATAAAAAACATCCCATAATGTAAATAAGTTGTCATTTAATAAGAATATGTAAATAACTAAATTTTTACAAATGTGTCAGATAGAACCTTATAATTCTAAGGTGACGATTTGTTACTGTTTTTACTATATGTGATTCTTGTGTTGCATTATGCAATGAATGAGGACTCTTGACTAAAAACCAAATATACCTTTGTTACATATATTGTAACCTAACCATCTATTTCTGTTAAATCCTCAGGGTCCTTTTGTGCATATTGCCAGTATCTGTGCAGCAGTGCTGAGCAGGGTCATGTCAATCTTCACCGGTGTGTA[T/A]GAGGTAAAAATCCCTGTGAGCTTGTTTGGTGTGTGTTGCAGAAGTGTGTGTTACTCTTCAGAAGCTGTTGACCTTAATTACTGATCTTAGATCAAGTTACAGCACATAAATTCCTACACCACACTATAACCATCAGGGGGTGTTTCATGTTTCTAAACCTCAGGTTAAGAATGAATATGAACTGCTTATTAGAACTTTACTTCCAATAATATTAGGTTGTTTGCATGTCTGTTTGTGTGTAATGTTCATGAATTCTAAGAAATTCTAAAGTACTAATTGCATAATCTTTTATTTTTATTCTCTCTACTCGTCCCTGTCTCATTATCTCTAACACCCTATTATTTTTGCCGTCTGTATTAATAGTGATGGCAATTTGGCATGTGTCTTGAATATGTGTCATGATGTTGTATTAACACCCCCCCCCCCCCCATTCCCCCGATTCACCTAGAATAGTGCCCATGTTCAGGATCTGCTGGTGTGTGCCTGTGCAGTGGGAGTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22800
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Essential Splice Site | 205 | 817 | 6 | 24 |
ENSDART00000131328 | Essential Splice Site | 280 | 697 | 7 | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19566611)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17596934 |
GRCz11 | 16 | 17504911 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAGGATGTGCTGTTGGGGTGGGCTGCTGTTTTGGGACTCCCCTTGGAGG[T/A]AAAAATTTCCATTTCTTTCTTTCCCCATTGATTTCATTTCCTCTTCTGTC
Long Flanking Sequence:
CCCCCCCCCCCCCCATTCCCCCGATTCACCTAGAATAGTGCCCATGTTCAGGATCTGCTGGTGTGTGCCTGTGCAGTGGGAGTGGCCACCTGTTTTGCTGCCCCAGTGGGAGGCAAGTCTAGCCCACTTTTACCAAGCATGCATTGCATTTTACCATGTTCATCTCTTTTAATTGCATTTATGCTTAGTTAATGTATGTATAAAGCTGGGATTTGAGTTTGCCTTTTGAACTCTGCTTTTTCTGATCTTTATTTATCTTTTCTTCTGTTTTATTTGTTCCCCCACAATGTACCCGCTGACATTGTAATTTGTTCTTCTCTTTACATTCTTTTGTTTTCCTCACCCTCTAACACACTCATTCTCCTGTTTGCTTTTACTTTAAACTCCCTCTTTCTCTCTCTTCTGTCTTGGTGTCAGTAGAACCCCTATGGTTACACAGACATACTGACAGTAGGATGTGCTGTTGGGGTGGGCTGCTGTTTTGGGACTCCCCTTGGAGG[T/A]AAAAATTTCCATTTCTTTCTTTCCCCATTGATTTCATTTCCTCTTCTGTCTCCTTCGGCTTGATGCCTGCTTAATAATTAACTTCATCATTACTTCACAGTTAAAAGCACCCATGTGTTATGAATTCTTATTCATAAAAAAATTATGATCATATTAACTACTGTTACTATTACTCACTTTTTTTGGTTTCTGAAGTATTTTCCACTAAAGATTTTAAAATCTTCATTAAAACATTTTAAAGGGCACCTATTTTAACTGTTTTTCAAGATTAAATACAAATCTTTTTTGTTTCCAGAGTGCTTCTGTAATGTTTTAGCTCAAAAATACCCATCGTATTATTTAGTATAACTTTCTGAATGTGGGAGATCTGATCTGTTAGAACACTGTAGCTGTTTTTGTTGCCTGTGCTTTTAATGCAAATGAGCTGGTTCTCCCCACTCATTGTTCACATTTGCATTTCAGAGCTATAAAGATCTCTCTCTATTGCTCTGATGCTTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32083
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Nonsense | 207 | 817 | 7 | 24 |
ENSDART00000131328 | Nonsense | 282 | 697 | 8 | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19563074)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17593397 |
GRCz11 | 16 | 17501374 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTAATCTTTTTTTTTTTTATTCATGTTTTCTCTGTCTCTCAGGTGTGT[T/A]GTTCAGTATTGAGGTCACATCAACATACTTTGCTGTGAGGAATTACTGGA
Long Flanking Sequence:
AGCCAGCTATTTAAAAGTATTTGAAAATCTGACAAAGATGCGTTGGTGAATGCTGTAATGAGAGAAAAAATACAATCCCATTAGCCTTTAAGGCAGGGGTGTCCACACACAGTCCTGGAAGTCGAGTGTCTTGGAGAATTTAGTTCCAACCCTAATCAAACACACCTGAACAAGCTAATCAAGCTCTTACTTGGTATACTAGAATGTTTCAGGCAGGTGTGTTGAAGCAAGTTGGAGCTAAAGTCAGCAGGACACCGGCCCTCCAGGAGCGACTTTGGACACCCCTGCTTTAGGGTCTATTTATTTAATTTAAGGTCTATTACTGTTAATGGTGGTTTGTTTGTGCATACTGTCATTCCAGTTTATCTATTAAGTTTTTACTCTTGTTACCATTTTTTCTATTTTTAACTGTGTTTTCTCTCTAACTTTCTTTCTAAGCGTTAACTTTGTTTTTAATCTTTTTTTTTTTTATTCATGTTTTCTCTGTCTCTCAGGTGTGT[T/A]GTTCAGTATTGAGGTCACATCAACATACTTTGCTGTGAGGAATTACTGGAGAGGATATTTTGCTGCAACATTCAGTGCCTTTATATTTCGAGTACTGTCAGTATGGAACAAAGACTCTGGTGAGACACACATACACACACGCAGGTAGATATAATAATGATAAATGCATGAATTTCACAATATATGACGAGCTGTTCACTGCTGACTGATCATGATAAATGAAACACATTAAGCAACATTTTAGTCTGGACCTTGTTTTTGAGTGACCAAGTTGTTTCAAATATGCTGATGTAAAATTCTCTGTGTATTAGTTGTGAGATTTTTTAGTATCTTTTTTTGCAGGTTACATCATTAAAACAGTGGAAATAGGAATGAGTCTTTTTTATTTAGCAGTGAAACTCTTGTGCTGTGTGTTCAAGGTTCCCATGGACTGTTTGATGCATATCACTGTCTTCATGTTTATTTAGTCTTTCATTCAGTCTTCGGGTTTGAAATATCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44848
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Essential Splice Site | 337 | 817 | 10 | 24 |
ENSDART00000131328 | Essential Splice Site | 412 | 697 | 11 | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19561905)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17592228 |
GRCz11 | 16 | 17500205 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCATCCTTCACATTTCCTCCTGGTTTTGGACAGTTCATGGCTGGAGAGG[T/A]GTGTATTCTCTTGCATGTAGAAGTAAATCTTAAACAATATCTATAAAGAA
Long Flanking Sequence:
GTGTGTGCCTACATGCATGAAAGTTTATTATGCATACTTGCACCCATGAAAAAAGCACTGTATGTAGCATTGGTTTGTTCTCTAGTTGATATGTTTCTAAATTGTGTGTGTATGTGTGCAGGATCTCATGTGGGTTTCTAGGGGCGTTCTTTGTCTATCTGAACAGACAAGTTGTTCTGATCATGAGGAGGCCGACAGCTCTAACACGCTTTCTCACAAAACAGCAAGTCATCAATTACATAAACCTACATATTGTATAATTAATAGTTTTAATTTAATTTAGTAAGTCATATTTACTTAGTATATAAGCATTATTTTGCTTATATTCTAAATGGTGTTTAAAATTATATCTATAACTTTACCAACATGATACTCACAGTGGTAATTTATTCTGCCTGTGTGTGTTTGCTGTAGCCGTCTGATTTACCCTGGTGCCGTGACACTAATTATAGCATCCTTCACATTTCCTCCTGGTTTTGGACAGTTCATGGCTGGAGAGG[T/A]GTGTATTCTCTTGCATGTAGAAGTAAATCTTAAACAATATCTATAAAGAAAGTTTTAATAAGCATAACTAATTTAGGAGTCTTTTATTTTCTTTCAACTTTTTTCAGGGGTATTTTTTCGGGGTATTTTTCCCCGACATTAGCCCCATTAAGAAATATTGTTTTTCAATTGGCTTCAGAACAAACCATTGTTATACTGTGAATTGTCTAAGTTAACCATAGTTTTTCATAGTTAAGTCTTTAAATTGTACTTTAGGCTGAATATGAGTTTCTTGAAAAATATCAAGTATAATATTATTTACTTTCAATATTGCAAAGATTAGTTATTAAAACTACTATGTTAAGGAAATGGTTAAAATAAATCTCTCTGTTATCAGCACTTAGAGAAAAATGTAAAAGAATTCAAATTTAACAGGAGGGCTAATCATTTTGACTGACACAGAAGCAGTAATTAATTCATTTTGATGTTCATCAAACCACTCTGTTACTAGTTTTGCTATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39093
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | None | 414 | 817 | 13 | 24 |
ENSDART00000131328 | Essential Splice Site | 488 | 697 | None | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19556074)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17586397 |
GRCz11 | 16 | 17494374 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATGATTGATAATTGATTGCAATAATATGATAAGATTTTTGAAACAAAC[A/T]GGAGCGGCATTCGGTCGTTTGGTGGGTGAGATCATGGCTACACTTTTCCC
Long Flanking Sequence:
ATCTTTTTTTTGTGTTCAATAGAATAAAGAAAACTCACTGGTTCAAATGTAATCATACATTCATTTATTTTCTTGTCGGCTTAGTTCCTTAATTAATCCGGGGTCGCCAAAGAGGAATAAACCGCAAACTTATCCAGCACGTTTTTTAAGCCCTTCCAGTCGCAACTCATCTCTGGGAAACATCCATCCATACACACGCACTCATACACTACCGACAATTTAGCTTACCCAATTGACCTGTACCGCATTATGTATTATTTAGGGGATCTTAAACAACCATGCCTTGTTGTATTTCAAGATGACACCTGCCTCAAATTTTAAAACTGGCTTTTAGTTGGCTTAATTTTGTCACACAAAATTGAATGTGTTTGTGATGGCTTTTAAAAGGTGCTAGCATTATAAAGTAAGCTTTACAAAATAGATGATTATAAATAAAAAGATAAAATAATTGCATGATTGATAATTGATTGCAATAATATGATAAGATTTTTGAAACAAAC[A/T]GGAGCGGCATTCGGTCGTTTGGTGGGTGAGATCATGGCTACACTTTTCCCCAATGGAATTCTGTTTGATGGAATTGTCTATCAAATCCTTCCTGGAGGCTATGCAGTGATAGGTCTGCAAATATTCTACCTTCAAGCTAATCCTTTACCCTGTTCTTTTGTTTTTATAATTTTATACTTTCATTTGCTTTCTCTTTTATTTTATCAACATTTAACCCACTTTTGTTTGTGTAGGGGCAGCAGCTATGACAGGAGCAGTCACACATACAGTTTCAACAGCAGTGATCTGTTTCGAACTGACAGGCCAAATCTCACACATCCTACCCATGATGGTGGCAGTGATTCTCGCCAACATGGTAGCCCAGGGTTTACAGCCTTCTCTTTATGACTCCATCATTCAGGTCAAAAAGCTGCCATATCTTCCAGAGCTCGGCATCGGTCACATCAGGTACCATAAGCAGAGATATGGAAACTGACATATAAATATAAAATATTGGATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39092
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Nonsense | 513 | 817 | 14 | 24 |
ENSDART00000131328 | Nonsense | 586 | 697 | 15 | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19555656)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17585979 |
GRCz11 | 16 | 17493956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTACAGCCTTCTCTTTATGACTCCATCATTCAGGTCAAAAAGCTGCCATA[T/A]CTTCCAGAGCTCGGCATCGGTCACATCAGGTACCATAAGCAGAGATATGG
Long Flanking Sequence:
TAGATGATTATAAATAAAAAGATAAAATAATTGCATGATTGATAATTGATTGCAATAATATGATAAGATTTTTGAAACAAACAGGAGCGGCATTCGGTCGTTTGGTGGGTGAGATCATGGCTACACTTTTCCCCAATGGAATTCTGTTTGATGGAATTGTCTATCAAATCCTTCCTGGAGGCTATGCAGTGATAGGTCTGCAAATATTCTACCTTCAAGCTAATCCTTTACCCTGTTCTTTTGTTTTTATAATTTTATACTTTCATTTGCTTTCTCTTTTATTTTATCAACATTTAACCCACTTTTGTTTGTGTAGGGGCAGCAGCTATGACAGGAGCAGTCACACATACAGTTTCAACAGCAGTGATCTGTTTCGAACTGACAGGCCAAATCTCACACATCCTACCCATGATGGTGGCAGTGATTCTCGCCAACATGGTAGCCCAGGGTTTACAGCCTTCTCTTTATGACTCCATCATTCAGGTCAAAAAGCTGCCATA[T/A]CTTCCAGAGCTCGGCATCGGTCACATCAGGTACCATAAGCAGAGATATGGAAACTGACATATAAATATAAAATATTGGATTTGAATTAGTGGTAGTGGCTCTCACCTTCAAGCTCTTCAAGCTATATCATTTTCTTTGGGGTTTGTTTGATGATTTTGCTCTTTGTGTCCAAAACAAGGAGAATGCCAAAAATGATGGACAGACACTATTAAGCTTTTGACATTTCTCTCTTGTTTTTCTATGACAGTAAATATAATATCTTTGTGGAGGACATCATGGTGAAGAAAATAAAGTTTCTGTCACCTCAGTCTACTTACAGAGAGCTGAAAGATCTCCTGGAGTCCACGTCTCTTAAAACCATCCCGCTCATTGATTCCAAAGGTATGTATTGTGTGATCAATCTACTTTTTATTTCATAGTGCACAGTTTATTTTAGATTCTTTTCAGACTATGTGTTCTATTCAGTATAATGAAACAAAACATTGCATGAAAAAGTATGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13816
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Nonsense | 543 | 817 | 15 | 24 |
ENSDART00000131328 | Nonsense | 616 | 697 | 16 | 17 |
ENSDART00000144994 | None | None | 88 | None | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19555350)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17585673 |
GRCz11 | 16 | 17493650 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATATCTTTGTGGAGGACATCATGGTGAAGAAAATAAAGTTTCTGTCACCT[C/T]AGTCYACTTACAGAGAGCTRAAAGATCTCCTGGAGTCCACGTCTCTTAAA
Long Flanking Sequence:
GTTTGTGTAGGGGCAGCAGCTATGACAGGAGCAGTCACACATACAGTTTCAACAGCAGTGATCTGTTTCGAACTGACAGGCCAAATCTCACACATCCTACCCATGATGGTGGCAGTGATTCTCGCCAACATGGTAGCCCAGGGTTTACAGCCTTCTCTTTATGACTCCATCATTCAGGTCAAAAAGCTGCCATATCTTCCAGAGCTCGGCATCGGTCACATCAGGTACCATAAGCAGAGATATGGAAACTGACATATAAATATAAAATATTGGATTTGAATTAGTGGTAGTGGCTCTCACCTTCAAGCTCTTCAAGCTATATCATTTTCTTTGGGGTTTGTTTGATGATTTTGCTCTTTGTGTCCAAAACAAGGAGAATGCCAAAAATGATGGACAGACACTATTAAGCTTTTGACATTTCTCTCTTGTTTTTCTATGACAGTAAATATAATATCTTTGTGGAGGACATCATGGTGAAGAAAATAAAGTTTCTGTCACCT[C/T]AGTCTACTTACAGAGAGCTGAAAGATCTCCTGGAGTCCACGTCTCTTAAAACCATCCCGCTCATTGATTCCAAAGGTATGTATTGTGTGATCAATCTACTTTTTATTTCATAGTGCACAGTTTATTTTAGATTCTTTTCAGACTATGTGTTCTATTCAGTATAATGAAACAAAACATTGCATGAAAAAGTATGATTACTCAAACATACAAAATTTGTTTTACAATCATTCATACATATTTGTGATAAAATTAAAGTCACAATTATTATAATTCATGTATTCATTCATTTGTTTTCTTTTCCATACAAATTCATTCACACTCATACATTACGGACAATTTAGCCTATCCAATTTACCTGCACCGCATGTCTTTGGACCGTGGGGGTAACCGGAGCACCCTGAGAAAACCCACGCGAACATGGGGAGAACATGCTCCGAACAAACTCCACACAGAAACAGCAACTGACCCAGCCAAGGCTCGAACCAGCGACCTTTTTGCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9348
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089292 | Nonsense | 765 | 817 | 22 | 24 |
ENSDART00000131328 | None | None | 697 | None | 17 |
ENSDART00000144994 | Nonsense | 50 | 88 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 19540267)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 17570590 |
GRCz11 | 16 | 17478567 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTRTTTTAGACTCACACATTGTTCTCTCTACTGGGTCTCAGTCATGCATA[T/A]GTAACCAGTATTGGTAAACTGGTTGGGGTGGTCGCACTAAAGGAGGTAAG
Long Flanking Sequence:
ATGGCAGGGGAAGGATGTAAATTTTCAAAATGATGCTAACGTTAGCATTCTGGCAAATCACCTACTGCACCTTTATGTACTATTTTGAAGATTATTTTTTAAATCAAATGATTTTTTTATTAAGCTATTATGATTTGTTGTTGTTGATGCTGTTGTTAATTTAGTTTCATAAAAAATACACAGAAATATTTTCCTGAAATATCTGATAATAATTAAAATTATTAAAAACCTACTTCTGAAAATGAAGCTTTGCCATAACTTATTTTTTACTATGCTCAATAACAATATTTTTAGTACGCTGAAAACAAACAAACAAACAAACAAACAAGCAAACAAACAAACAAACAAACAACAAAAACATTTTACGAAATTTTGGATAAAAAGGATTCTTTCAAATAACTGAAAAATCATATGTACTCGTAGTTTTGAATGATAAAACATTTATTTTGTTTGTTTTAGACTCACACATTGTTCTCTCTACTGGGTCTCAGTCATGCATA[T/A]GTAACCAGTATTGGTAAACTGGTTGGGGTGGTCGCACTAAAGGAGGTAAGGATTTAAAGATCGTCTCTCCCAATTTACCAGACAAAATATATGGCTATATTTGAAGTAAATCATTTGACTTTATTCACTTTCATTCCCAGCTCCAGAAAGCAATCGAAGGTTCAACACGCAGCGGTGTGCGACTGCGTCCCCCTTTGGCCAGTTTCAGAGATGCAAGACGAAAAACAAAAAAACCTTCTCATTCCCCTTCTATCCCATCCTCTCCCACACAGGACATAGAGTTATGGAGTGAGGCAGTTAGAAGAGAAAGTAAAGAGGAGTCTGCTGGCAGTTGTATTCAGACAGTTGAGAAAGAGTGTGAGAGCAGCAGAAATATAGTGAGCACCTCTGAGGAGCAGCTGCCTTCCTCTTCTACAGTCCCTCTCTCCTCACTTCATTCTGTGCCTGGAGGAGAGGGCGATGCTGAAAAAGAGAGAGATGAGGAGCCGTTATAGATCTTT
Associated Phenotype:
Not determined