ZMP
zgc:165618
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC795095 [Source:RefSeq peptide;Acc:NP_001092721]
Human Orthologue:
HMGB1
Human Description:
high-mobility group box 1 [Source:HGNC Symbol;Acc:4983]
Mouse Orthologues:
AC166253.1, Gm5518, Hmgb1
Mouse Descriptions:
high mobility group box 1 Gene [Source:MGI Symbol;Acc:MGI:96113]
predicted gene 5176 (Gm5176), non-coding RNA [Source:RefSeq DNA;Acc:NR_033603]
predicted gene 5518 Pseudogene [Source:MGI Symbol;Acc:MGI:3648673]
predicted gene 5176 (Gm5176), non-coding RNA [Source:RefSeq DNA;Acc:NR_033603]
predicted gene 5518 Pseudogene [Source:MGI Symbol;Acc:MGI:3648673]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44825 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44825
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108983 | Nonsense | 111 | 165 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 15 (position 30811316)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 31633023 |
| GRCz11 | 15 | 31513764 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGCTTGGAGAAATGTGGAACAGCTCATCAGCTGAAGTGAAGCAGCCCTA[T/A]GAAAAGAAAGCCGCAAAGCTCAAGGAGAAGTACGACAAGGTAAAGCAGCC
Long Flanking Sequence:
TATGCTGTTATAAAAATAGTACATTTGTTGATTTTTCTAAGGAATATTTGGGGGGAAAAAAGGTGACATTTAGAAATAAGTAACGAACAAGACACACACCTTACACTTTTGTTAAAGCCTTTTCTCATTCTGAACAGACAATGTCTGCCAAAGAGAAGGGCAAGTTTGAGGATATGGCCAAGCAAGATAAGGTTCGCTATGAGAGGGAAATGAAGAACTACATCCCACCAAAGGGTGAGAAGAAGAAGAGGTTTAAGGATCCCAACGCACCCAAGAGACCACCGTACGTTCACTCTTTGCACTTCCATTGAAAGCATGAAGGGAACAAATAGGTTGATTTGAATGCATGTTTTTTTCCCCCAAAGGTCAGCGTTCTTCATTTTCTGTGGTGATTACCGCCCTAAGATAAAGGGTGAAAACCCTGGTCTGTCCATCGGCGACATTGCCAAAAAGCTTGGAGAAATGTGGAACAGCTCATCAGCTGAAGTGAAGCAGCCCTA[T/A]GAAAAGAAAGCCGCAAAGCTCAAGGAGAAGTACGACAAGGTAAAGCAGCCTTTTCCTACATTTACTTGCTAGCTTGTAGATGCACTTGCCTCATTTGTTAATGCTTTTATCTTCTGTAGGATATTGCCCTGTACCGCACAAAGGGAATTGCAGGCTTTTCAAAGAAAGAAGGTGGGGAGGATGATGAGGAGGATGAAGACGACGATGAGGAGGAGGACGACGAAGAGGAGGAGGATGATGAGTAGATTAGCTACTGATGTGGCCTAGGTTCTTGTTCATGCCATAACCCCAATTGTACATGATTCACATCTTCAAACGTAATACAGCAGATACAAGAATGGTTAGGCTGTGTATATGCGACGTTTTTAAGATGTACAGTGTTATTCTCCTTTTGTAAAGTTAACACTATGTGTCTCGAGTCTTATTATTTTTTTATCTTTGTTTTTGTTAGTGGTAGTTCTTGCCAGGAACAGTTTAAGGTTGAATAATATAAACTGTAC
Associated Phenotype:
Not determined