Busch Lab

ZMP

tcf7l1a

Ensembl ID:
ENSDARG00000038159
ZFIN ID:
ZDB-GENE-980605-30
Description:
Transcription factor 7-like 1-A [Source:UniProtKB/Swiss-Prot;Acc:Q9YHE8]
Human Orthologue:
TCF7L1
Human Description:
transcription factor 7-like 1 (T-cell specific, HMG-box) [Source:HGNC Symbol;Acc:11640]
Mouse Orthologue:
Tcf7l1
Mouse Description:
transcription factor 7-like 1 (T-cell specific, HMG box) Gene [Source:MGI Symbol;Acc:MGI:1202876]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa44731 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa384 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa44731
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099262 Essential Splice Site 237 560 6 12
ENSDART00000140341 Essential Splice Site 108 431 3 9

The following transcripts of ENSDARG00000038159 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 43576951)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 42383446
GRCz11 10 42211826
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGGGGCAGTCGGACAGATCCCTCACCCTCTTGGATGGTTGGTTCCTCA[G/A]TAAGTCTGAACTACCTTGAAAAACACCTCATTTTACACCCCAGTAGATGA
Long Flanking Sequence:
AACAAAATAATAACTTAGGATACAATCATCAACTACAGCGGGGGATCAGAACCAGAGAAAAATTCCCTCGTGAAATCTAACATTATATCACTCTTTTTGTTTTTAATTAGCATTAGAGGATTTTTCAAACTTTCCATTTGAGATGATCACTAGTGGGCGGGGCTTTCACCTTTTGATGACACGTACAAAGAGAGAATGTCAATCAAAGTGTTTCCGAAGACTCTTCAAGAGTGATCATAAAAATTAGACTGAATTAATTTTCACCATTATAGGCTGGCTATATTCACACATTGCTCCACACAACTCCCTTAAAAAGTGATTTTTGCTTAACAGGTCCTCTTTAAGAGGAAGCAATGTGGTTTTATAATCTAAATAAATAAATCGATTGTTTCTACAGGCATACCAAGGACCCCTCACCCCTCAGAGCTGTCCCCATATTACCCTCTCTCTCCTGGGGCAGTCGGACAGATCCCTCACCCTCTTGGATGGTTGGTTCCTCA[G/A]TAAGTCTGAACTACCTTGAAAAACACCTCATTTTACACCCCAGTAGATGACGGAATCAAATGTGGAGCTATTTTTAAAAGTTCTCGTAGCTAAAAGAGCATCTGCGTGTCCTTGATTTTTGCCTCAGCTGGTTTATTTGAGTGCTGTTCCTCCATCTTTATAGGCAAGGCCAGCATATGTACTCCATCCCTCCCGGAGGCTTCAGACACCCCTACCCTGCACTCGCCATGAACGCCTCCATGTCTAGGTATGTAACGGAGAGCTGGCTTCTCGTTTTTCTGCACGAATGTGATGATTTAAAGTTGAACTCGCATCTATAATTAGAGCTGAGATGCAGACAGTGCTAATCCTCCCTGAAGGGGAAGAGAAGAGGAAGCTGCTGATGTGTTTTCGCTCCATATTGGCGCCTTGGTACATTTCTCTTTCCACCCCGCGCAATGTTCCAGAGAGGAAACCTGCTTTTTCGGGTGCAGTACAATTTAGTTTATCTTGCTCCGATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa384
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099262 Nonsense 321 560 9 12
ENSDART00000140341 Nonsense 192 431 6 9

The following transcripts of ENSDARG00000038159 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 43567542)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 42374037
GRCz11 10 42202417
KASP Assay ID:
554-0186.1 (used for ordering genotyping assays)
KASP Sequence:
ATCTCCCTCTTTCTCTCTCTCCATGCAGAAAGCCCTCGGTGCCCGTGAAG[A/T]AAGAGGAAGAGAAAAAGCCTCACATCAAGAAGCCTCTTAATGCCTTCATG
Long Flanking Sequence:
ATGGATCCATGCTTTCATGGTGTAGATGCCAAATTCTGACCCGACTATCCAAAGAAATTGATTACCTGATTAGAAATTTGCGATAATTAACAGTTGGACAGGTGTACCTAATAAAGTGGCCGGTGAGTGTATACCGCAATATTTATTGCAGGGAAAAAAACATTGCAATGTCAGATTTTTCCAATATCGTGCAGCCTTATTATTAGTGTATTATTTATAATTGTTGATGTATTTTTATTGTTATAAACCTTTTTTGTTATTTATATGATTTATTTGTAAAGTGTATTATTATTGTACACCTGTTTTACCAGGTTTAATTGTTTAAATGGTTTATTCTTATTTATGTATAGTACGTTGAGTTACAGTTGTGTATGAAATGTGCGTTGGAAATAGTTTTGCCATGAAATATCCAGGGAAGCTGAAACCTAAAATCTCCAAACTTCTCTGAAAATCTCCCTCTTTCTCTCTCTCCATGCAGAAAGCCCTCGGTGCCCGTGAAG[A/T]AAGAGGAAGAGAAAAAGCCTCACATCAAGAAGCCTCTTAATGCCTTCATGCTCTACATGAAGGAAATGAGGGCCAAAGTAGTGGCTGAGTGTACCCTGAAAGAGAGCGCCGCCATCAACCAGATCCTGGGCAGAAGGGTGAGCGCTTACAGCTCCATTATCAAGGATGCATTAGTGTGTTTCTCTTCATCTGCTCTTAAAGGAACAGTTCGCGCCTTGTGGGTGAAAAAAGGCCATCATTTACTCTCTTTCTCAATCTTGTCATTGCAAACCTGTGTGAGGCACAAAAGGAGAAGGTGTTTTGAAGAGTTTTGCTGTGAAAAGTAACTATGCATTAGTGAATCTGTGTGTGCTGCTGATAATCCAGGGTTTTAGGTTATCAAAGGATAGGTTTACATGAGAATGATGTCGTCAAAAACAACGCTTTTGTTGTTATGCAATTTTCTACATTAGTACAAAAGTTCTGATGCAGTCATATGCATGCATTTATTTAATGTTTTA
Associated Phenotype:
Not determined